Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-260b17.5

Gene Name Gene ID Reads Annotation
si:ch211-260b17.5 2 si:ch211-260b17.5










Genes with expression patterns similar to si:ch211-260b17.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-260b17.5 2 2 1.000 - - - - - - 1.000 - si:ch211-260b17.5
2. zp3a.2 ENSDARG00000042130 163 1.693 0.950 - - - - - - 0.743 - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
3. si:dkey-145c18.5 ENSDARG00000093764 1 1 - - - - - - - 1.000 - si:dkey-145c18.5 [Source:ZFIN;Acc:ZDB-GENE-081104-310]
4. zgc:174260 ENSDARG00000091800, ENSDARG00000116307 10 1 - - - - - - - 1.000 - zgc:174260 [Source:ZFIN;Acc:ZDB-GENE-080213-9]
5. prf1.7 1 1 - - - - - - - 1.000 - perforin 1.7
6. SNORD15_1 SNORD15_1 1 1 - - - - - - - 1.000 -
7. serpinb1l1 ENSDARG00000095830 14 1 - - - - - - - 1.000 - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040715-5]
8. BX284672.2 BX284672.2 1 1 - - - - - - - 1.000 -
9. ARHGAP18 ENSDARG00000074740 4 1 - - - - - - - 1.000 - Rho GTPase activating protein 18 [Source:ZFIN;Acc:ZDB-GENE-070502-1]
10. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - - 1.000 -
11. si:ch211-226h8.6 ENSDARG00000077097 1 1 - - - - - - - 1.000 - si:ch211-226h8.6 [Source:ZFIN;Acc:ZDB-GENE-050208-456]
12. mid1 ENSDARG00000060482 154 1 1.000 - - - - - - - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
13. ccdc127a 39 1 1.000 - - - - - - - - coiled-coil domain containing 127a, transcript variant X2
14. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - - - 1.000 -
15. BX005268.1 BX005268.1 1 1 - - - - - - - 1.000 -
16. trpc5a ENSDARG00000070504 5 1 - - - - - - - 1.000 - transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]
17. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 1.000 - - - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
18. si:dkey-31k12.2 si:dkey-31k12.2 1 1 - - - - - - - 1.000 -
19. si:dkey-150k17.3 33 1 - - - - - - - 1.000 - si:dkey-150k17.3
20. FAM155A ENSDARG00000075858 1 1 - - - - - - - 1.000 - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
21. Vault Vault 3 1 - - - - - - - 1.000 -
22. dpyda dpyda 12 1 - - - - - - - 1.000 -
23. si:ch211-209j10.5 si:ch211-209j10.5 13 1 - - - - - - - 1.000 -
24. BX004964.2 BX004964.2 1 1 - - - - - - - 1.000 -
25. FAM160A1 FAM160A1 1 1 - - - - - - - 1.000 -
26. C20H1orf95 C20H1orf95 12 1 1.000 - - - - - - - -
27. zgc:113625 ENSDARG00000054160 276 1 1.000 - - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
28. PRSS35 ENSDARG00000100691, ENSDARG00000109353 1 1 - - - - - - - 1.000 - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
29. WDR49 WDR49 6 1 - - - - - - - 1.000 -
30. MCOLN3 MCOLN3 4 1 - - - - - - - 1.000 -
31. DOCK4 DOCK4 78 1 1.000 - - - - - - - -
32. CRFA31.2 CRFA31.2 12 1 - - - - - - - 1.000 -
33. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - - - - 1.000 -
34. crygn2 ENSDARG00000030411 2551 0.95 0.950 - - - - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
35. st6galnac_1 ENSDARG00000086292 137 0.95 0.950 - - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
36. supt3h ENSDARG00000098141 18 0.95 0.950 - - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
37. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.942 0.942 - - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
38. ZNF337_16 ZNF337_16 22 0.942 0.942 - - - - - - - -
39. zgc:174654 zgc:174654 54 0.918 0.918 - - - - - - - -
40. tpd52l1 ENSDARG00000042548 61 0.918 0.918 - - - - - - - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
41. erbb3b ENSDARG00000036993, ENSDARG00000110287 85 0.908 0.908 - - - - - - - - erb-b2 receptor tyrosine kinase 3b [Source:ZFIN;Acc:ZDB-GENE-050107-1]
42. upk1a ENSDARG00000021866 9 0.907 - - - - - - - 0.907 - uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
43. CU467646.3 ENSDARG00000099076 36 0.896 - - - - - - - 0.896 - mucin-2-like [Source:NCBI gene;Acc:108179180]
44. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 0.896 - - - - - - - 0.896 - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
45. si:dkey-182i3.9 ENSDARG00000096575 56 0.895 0.895 - - - - - - - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
46. FRMD7 ENSDARG00000068958 17 0.894 - - - - - - - 0.894 - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
47. zfyve19 ENSDARG00000003642 12 0.891 - - - - - - - 0.891 - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
48. CABZ01068153.1 CABZ01068153.1 211 0.885 0.885 - - - - - - - -
49. CABZ01060030.1 ENSDARG00000106579 55 0.884 0.884 - - - - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
50. HAUS2 HAUS2 392 0.884 0.884 - - - - - - - -
51. SLC36A4 ENSDARG00000039661 175 0.881 0.881 - - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
52. mapk8a ENSDARG00000031888 44 0.869 0.869 - - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
53. CABZ01067609.1 CABZ01067609.1 111 0.869 0.869 - - - - - - - -
54. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 0.868 0.868 - - - - - - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
55. zgc:174222 ENSDARG00000103078 84 0.863 0.863 - - - - - - - - zgc:174222 [Source:ZFIN;Acc:ZDB-GENE-080220-40]
56. cx32.3 ENSDARG00000041787 33 0.857 - - - - - - - 0.857 - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
57. tfec ENSDARG00000098745 1399 0.842 0.842 - - - - - - - - transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
58. scrn3 ENSDARG00000016611 74 0.84 0.840 - - - - - - - - secernin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4783]
59. zgc:153722 ENSDARG00000071044, ENSDARG00000110778, ENSDARG00000113166 70 0.838 0.838 - - - - - - - - zgc:153722 [Source:ZFIN;Acc:ZDB-GENE-060929-84]
60. hrh3 ENSDARG00000035942 32 0.834 - - - - - - - 0.834 - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
61. cdkl5 ENSDARG00000015240 68 0.828 0.828 - - - - - - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
62. cldnd ENSDARG00000006580 17 0.828 - - - - - - - 0.828 - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
63. si:dkey-241l7.6 ENSDARG00000041248 5 0.828 - - - - - - - 0.828 - si:dkey-241l7.6 [Source:ZFIN;Acc:ZDB-GENE-041014-235]
64. LRFN2_1 LRFN2_1 17 0.822 - - - - - - - 0.822 -
65. uox ENSDARG00000007024 205 0.82 - - - - - - - 0.820 - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
66. si:dkey-70e17.2 si:dkey-70e17.2 371 0.816 0.816 - - - - - - - -
67. CABZ01074423.1 CABZ01074423.1 8 0.816 - - - - - - - 0.816 -
68. si:dkey-1b17.11 si:dkey-1b17.11 3 0.816 - - - - - - - 0.816 -
69. CHD6 ENSDARG00000017244 219 0.811 0.811 - - - - - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
70. ccdc33 ENSDARG00000051858 11 0.81 - - - - - - - 0.810 - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
71. ctskl ctskl 17 0.802 - - - - - - - 0.802 -
72. si:ch211-258f1.3 ENSDARG00000105119 23 0.799 0.799 - - - - - - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
73. VDAC3_1 VDAC3_1 35 0.799 0.799 - - - - - - - -
74. nfatc1 ENSDARG00000036168 16 0.785 - - - - - - - 0.785 - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
75. AL935186.3 ENSDARG00000109223 19 0.781 - - - - - - - 0.781 -
76. calml4a ENSDARG00000075800 14 0.776 - - - - - - - 0.776 - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
77. casp6 ENSDARG00000093405, ENSDARG00000115863 11 0.775 - - - - - - - 0.775 - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
78. tnfb ENSDARG00000013598 94 0.775 - - - - - - - 0.775 - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
79. mmrn2b ENSDARG00000073711 391 0.766 0.766 - - - - - - - - multimerin 2b [Source:ZFIN;Acc:ZDB-GENE-080415-2]
80. Metazoa_SRP_8 Metazoa_SRP_8 153 0.765 - - - - - - - 0.765 -
81. IFITM10 IFITM10 4 0.764 - - - - - - - 0.764 -
82. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 0.764 - - - - - - - 0.764 - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
83. fopnl ENSDARG00000071198 1002 0.761 0.761 - - - - - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
84. kat2b ENSDARG00000062634 276 0.76 0.760 - - - - - - - - K(lysine) acetyltransferase 2B [Source:ZFIN;Acc:ZDB-GENE-060503-207]
85. asb3 ENSDARG00000005246 317 0.759 0.759 - - - - - - - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
86. hgd ENSDARG00000058005 437 0.759 0.759 - - - - - - - - homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]
87. BX324198.2 BX324198.2 84 0.759 0.759 - - - - - - - -
88. ahsg ahsg 39 0.757 - - - - - - - 0.757 -
89. zgc:153292 ENSDARG00000070458, ENSDARG00000112223 134 0.756 0.756 - - - - - - - - zgc:153292 [Source:ZFIN;Acc:ZDB-GENE-060929-1098]
90. wu:fd58b11 wu:fd58b11 21 0.753 - - - - - - - 0.753 -
91. si:ch211-11n16.2 ENSDARG00000099779 417 0.753 0.753 - - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
92. si:ch211-202c21.7 ENSDARG00000094126 2 0.752 - - - - - - - 0.752 - si:ch211-202c21.7 [Source:ZFIN;Acc:ZDB-GENE-081031-16]
93. CSMD3 CSMD3 0 0.749 0.749 - - - - - - - -
94. vil1 ENSDARG00000040466 81 0.749 - - - - - - - 0.749 - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
95. aqp8b ENSDARG00000089749 108 0.744 - - - - - - - 0.744 - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
96. CABZ01044023.1 ENSDARG00000117734 240 0.744 0.744 - - - - - - - -
97. ing1 ENSDARG00000019116 394 0.744 0.744 - - - - - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
98. zgc:154054 ENSDARG00000099923 19 0.741 0.741 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
99. ch25hl2 ENSDARG00000038728 100 0.741 0.741 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
100. si:ch73-269m14.3 ENSDARG00000096305 28 0.741 0.741 - - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA