Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-258f1.3

Gene Name Gene ID Reads Annotation
si:ch211-258f1.3 ENSDARG00000105119 23 si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]










Genes with expression patterns similar to si:ch211-258f1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-258f1.3 ENSDARG00000105119 23 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
2. CABZ01069081.1 CABZ01069081.1 16 1.984 - - - - - 1.000 0.984 - -
3. zgc:92161 ENSDARG00000101749 27 1.947 - 0.947 - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
4. FP236810.3 FP236810.3 1 1.947 - 0.947 - - - 1.000 - - -
5. spp1 ENSDARG00000044276 34 1.848 - 0.856 - - - - 0.992 - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
6. nbn ENSDARG00000040303 43 1.832 - 0.832 - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
7. NUGGC NUGGC 9 1.815 - - - - - 1.000 0.815 - -
8. rx3 ENSDARG00000052893 43 1.815 - - - - - 1.000 0.815 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
9. si:ch211-202m22.1 ENSDARG00000094491 24 1.815 - - - - - 1.000 0.815 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
10. CABZ01112732.1 ENSDARG00000068453 4 1.815 - - - - - 1.000 0.815 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
11. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.799 0.799 - - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
12. 5_8S_rRNA 5_8S_rRNA 24 1.79 - - - - 0.975 - 0.815 - -
13. hif1al2 ENSDARG00000044550 140 1.771 - 0.771 - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
14. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1.762 - 0.947 - - - - 0.815 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
15. slc5a12 ENSDARG00000005004 15 1.762 - 0.947 - - - - 0.815 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
16. rnf165a ENSDARG00000077906 133 1.75 - 0.750 - - - 1.000 - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
17. C14orf80 C14orf80 20 1.745 - - - - - 1.000 0.745 - -
18. wdr65 wdr65 251 1.739 - - - - - 1.000 0.739 - -
19. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.729 - 0.947 - - - - 0.782 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
20. bbs5 ENSDARG00000039827 211 1.725 - 0.725 - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
21. slc9a3.1 ENSDARG00000058498 46 1.721 - 0.927 - - - - 0.794 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
22. CU896645.1 CU896645.1 10 1.716 - - - 0.716 - 1.000 - - -
23. rnaset2l ENSDARG00000058413 17 1.708 - - - - - 1.000 0.708 - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
24. zgc:165481 ENSDARG00000060092 95 1.696 - 0.947 - - - 0.749 - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
25. tbc1d31 ENSDARG00000074623 94 1.628 - 0.701 - - - 0.927 - - - TBC1 domain family, member 31 [Source:ZFIN;Acc:ZDB-GENE-061218-4]
26. si:ch211-244b2.3 ENSDARG00000069244 19 1.601 0.786 - - - - - 0.815 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
27. dnaaf1 ENSDARG00000012030 58 1.585 - 0.836 - - - 0.749 - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
28. EFEMP1 32 1.575 - - - - 0.802 - 0.773 - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
29. CR339057.1 CR339057.1 7 1.572 - 0.757 - - - - 0.815 - -
30. fybb ENSDARG00000044694 136 1.568 - - - - 0.732 - 0.836 - - FYN binding protein b [Source:ZFIN;Acc:ZDB-GENE-091204-85]
31. NAT14 ENSDARG00000115349 21 1.558 - - - - 0.850 - 0.708 - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
32. si:dkey-104n9.1 ENSDARG00000093042 41 1.555 - 0.740 - - - - 0.815 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
33. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 1.545 - 0.824 - - - - 0.721 - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
34. BX324131.3 BX324131.3 278 1.54 - 0.768 - - - 0.772 - - -
35. si:ch211-161m3.4 ENSDARG00000103375 10 1.537 - - - 0.722 - - 0.815 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
36. si:dkey-13m3.1 si:dkey-13m3.1 45 1.535 - - - - - 0.720 0.815 - -
37. prg4a ENSDARG00000010482 10 1.494 - - - - 0.788 - - - 0.706 proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
38. TERF2IP ENSDARG00000103977 216 1.484 0.776 0.708 - - - - - - - telomeric repeat binding factor 2, interacting protein [Source:ZFIN;Acc:ZDB-GENE-131121-641]
39. sost ENSDARG00000061259 216 1.484 - 0.725 - - - 0.759 - - - sclerostin [Source:ZFIN;Acc:ZDB-GENE-110411-139]
40. TTC18 TTC18 58 1.472 - 0.764 - - - - 0.708 - -
41. BEND2 BEND2 92 1.461 - 0.711 - - - 0.750 - - -
42. si:dkey-104k17.1 si:dkey-104k17.1 13 1.449 - 0.710 - - - - 0.739 - -
43. cacnb2a ENSDARG00000099045 374 1.443 - - - - - 0.735 0.708 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
44. vstm4a ENSDARG00000010154 129 1.423 - 0.708 - - 0.715 - - - - V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]
45. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
46. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
47. leprel4 leprel4 34 1 - - - - - 1.000 - - -
48. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
49. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
50. htr1bd htr1bd 8 1 - - - - - 1.000 - - -
51. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
52. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
53. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - - - - - 1.000 - - -
54. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
55. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
56. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
57. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
58. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
59. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
60. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
61. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
62. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
63. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
64. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
65. PPAPDC3 PPAPDC3 14 1 - - - - - 1.000 - - -
66. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
67. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
68. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
69. BX927122.3 BX927122.3 19 1 - - - - - 1.000 - - -
70. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
71. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
72. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - 1.000 - - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
73. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
74. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
75. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -
76. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
77. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
78. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
79. rpz3 ENSDARG00000069728 11 1 - - - - - 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
80. VDAC3_1 VDAC3_1 35 1 1.000 - - - - - - - -
81. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
82. gpr12 ENSDARG00000062934 7 1 - - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
83. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
84. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
85. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
86. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]
87. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
88. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
89. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
90. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
91. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
92. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
93. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
94. cngb3 cngb3 12 1 - - - - - 1.000 - - -
95. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
96. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
97. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
98. FDFT1 ENSDARG00000101062 6 1 - - - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
99. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
100. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -

There are 1173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA