Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-255p10.3

Gene Name Gene ID Reads Annotation
si:ch211-255p10.3 ENSDARG00000096616 8336 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]










Genes with expression patterns similar to si:ch211-255p10.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-255p10.3 ENSDARG00000096616 8336 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
2. mybpc2b ENSDARG00000021265 9618 4.832 - - 0.784 0.764 0.767 - 0.966 0.716 0.835 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
3. tnnt3a ENSDARG00000030270 112506 4.74 - - 0.790 0.740 - 0.744 0.770 0.784 0.912 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 4.139 - - 0.898 0.750 - 0.735 - 0.841 0.915 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. si:ch211-226o13.2 84923 4.096 - - 0.783 0.809 - 0.779 - 0.812 0.913 si:ch211-226o13.2
6. ryr3 ENSDARG00000071331 6795 4.027 - - 0.739 0.726 - 0.797 0.858 - 0.907 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
7. MYOM2_1 MYOM2_1 4054 4.003 - - 0.785 0.827 - 0.814 - 0.726 0.851
8. ttnb ttnb 73721 3.913 - - 0.791 0.752 - 0.862 - 0.719 0.789
9. pkmb ENSDARG00000099860 25094 3.905 - - 0.794 0.834 - - 0.720 0.795 0.762 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
10. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.88 - - 0.735 0.714 - 0.776 - 0.804 0.851 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. tpma ENSDARG00000033683 752432 3.748 - - 0.713 - - 0.706 0.746 0.821 0.762 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
12. ptrfa ptrfa 4363 3.727 - - 0.715 0.720 0.703 0.805 - - 0.784
13. myom1a ENSDARG00000061249 10230 3.431 - - - - - 0.940 0.891 0.762 0.838 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
14. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 3.4 - - 0.868 0.896 - - - 0.776 0.860 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
15. BX294434.1 ENSDARG00000061272 6493 3.362 - - 0.755 0.799 - - 0.895 - 0.913 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
16. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 3.308 - - - 0.742 - 0.928 0.897 0.741 - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
17. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.303 - - 0.792 0.816 - 0.868 - - 0.827 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
18. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.297 - - - - - 0.899 0.860 0.717 0.821 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
19. cap2 ENSDARG00000104478 3266 3.269 - - - - - 0.876 0.842 0.732 0.819 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
20. eno3 ENSDARG00000039007 11355 3.265 - - - 0.736 - - 0.949 0.744 0.836 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
21. myoz1b ENSDARG00000071445 13381 3.258 - - 0.749 0.835 - - - 0.774 0.900 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
22. tnnt3b ENSDARG00000068457 101827 3.258 - - 0.879 0.833 - 0.713 - 0.833 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
23. mylpfb ENSDARG00000002589 70167 3.247 - - 0.801 0.869 - 0.755 - 0.822 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
24. tnnt2d ENSDARG00000002988 7590 3.235 - - 0.712 - - 0.874 0.838 - 0.811 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
25. atp2a1l ENSDARG00000035458 6222 3.195 - - 0.779 0.810 - - - 0.730 0.876 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
26. slc16a3 ENSDARG00000045051 818 3.182 - - - 0.718 - 0.862 0.845 - 0.757 solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
27. jph1a ENSDARG00000058603 2852 3.168 - - - 0.727 - 0.749 0.878 - 0.814 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
28. pvalb1 ENSDARG00000037789 121195 3.167 - - 0.763 0.719 - 0.888 - 0.797 - parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
29. zgc:86725 2559 3.163 - - - 0.777 - 0.721 0.803 - 0.862 zgc:86725
30. mylz3 ENSDARG00000017441 303597 3.161 - - 0.770 0.766 - - - 0.757 0.868 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
31. atp2a1 ENSDARG00000020574 291561 3.154 - - 0.780 0.739 - - - 0.761 0.874 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
32. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.138 - - 0.703 0.767 - - 0.882 0.786 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
33. prx ENSDARG00000017246 6183 3.104 - - 0.767 0.735 - - 0.890 - 0.712 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
34. tnni2a.4 ENSDARG00000029069 122344 3.06 - - 0.723 - 0.725 - - 0.808 0.804 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
35. ckmb ENSDARG00000040565 505935 3.006 - - 0.730 - - 0.747 - 0.800 0.729 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
36. acta1b ENSDARG00000055618 195597 2.995 - - 0.711 - - 0.784 - 0.786 0.714 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
37. PTPLA PTPLA 4044 2.666 - - - - - 0.943 0.880 - 0.843
38. jph2 ENSDARG00000028625 6706 2.654 - - - - - 0.881 0.881 - 0.892 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
39. klhl41b ENSDARG00000006757 10762 2.592 - - - - - 0.949 0.895 - 0.748 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
40. CR847973.1 ENSDARG00000115516 8754 2.58 - - - - - 0.856 0.832 - 0.892
41. nexn ENSDARG00000057317 10972 2.559 - - - - - 0.937 0.894 - 0.728 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
42. trdn ENSDARG00000041779 4283 2.555 - - - - - 0.862 0.867 - 0.826 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
43. myod1 ENSDARG00000030110 6019 2.524 - - - - - 0.916 0.894 - 0.714 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
44. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.521 - - - 0.809 - - - 0.764 0.948 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
45. hhatla ENSDARG00000039051 6598 2.517 - - 0.706 - - - 0.891 - 0.920 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
46. gmpr ENSDARG00000016160 1537 2.517 - - - - - 0.862 0.872 - 0.783 guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
47. ryr1b ENSDARG00000023797 5693 2.513 - - - - - - 0.884 0.750 0.879 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
48. tgm2a ENSDARG00000070157 4516 2.513 - - - - - 0.866 0.875 - 0.772 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
49. DNAJA4 ENSDARG00000051762 5657 2.51 - - - - - 0.875 0.896 0.739 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
50. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.498 - - - - - - 0.909 0.733 0.856 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
51. znf648 ENSDARG00000104823 1918 2.492 - - - - - 0.859 0.806 - 0.827 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
52. fbp2 ENSDARG00000012366 1042 2.489 - - - - - 0.846 0.844 - 0.799 fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
53. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.477 - - - - - - 0.882 0.722 0.873 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
54. mdh1b ENSDARG00000018008 3196 2.475 - - - - - 0.780 0.894 - 0.801 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
55. zgc:92113 1738 2.467 - - - - - 0.806 0.878 - 0.783 zgc:92113
56. stac3 ENSDARG00000098883 1765 2.45 - - - - - 0.864 0.867 - 0.719 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
57. hsc70 ENSDARG00000012381 961 2.447 - - - - - - 0.845 0.742 0.860 heat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
58. hspb9 ENSDARG00000078674 2755 2.445 - - 0.890 - - 0.786 0.769 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
59. dhrs7c dhrs7c 1173 2.445 - - - - - 0.867 0.842 - 0.736
60. mafa ENSDARG00000015890 2140 2.437 - - - - - 0.896 0.840 - 0.701 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
61. CR354540.2 ENSDARG00000117517 18452 2.436 - - 0.712 - - - 0.857 - 0.867
62. pygma ENSDARG00000055518 15972 2.434 - - - - 0.707 - 0.965 - 0.762 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
63. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.423 - - - - - 0.824 0.764 - 0.835 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
64. rtn2a ENSDARG00000016088 12184 2.411 - - 0.725 - - - 0.898 0.788 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
65. scn4ba ENSDARG00000099031 1634 2.408 - - - - - 0.900 0.747 - 0.761 sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
66. smyd1a ENSDARG00000009280 1503 2.405 - - - - 0.732 0.833 0.840 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
67. cmya5 ENSDARG00000061379 1423 2.403 - - - - - 0.764 0.876 - 0.763 cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
68. synpo2b ENSDARG00000077157 1009 2.394 - - - - - 0.797 0.819 - 0.778 synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
69. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 2.35 - - 0.736 - - 0.780 0.834 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
70. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.345 - - 0.746 - - 0.778 - 0.821 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
71. ckmt2 ckmt2 768 2.343 - - - - - 0.754 0.802 - 0.787
72. CR392006.1 CR392006.1 1401 2.336 - - - - - 0.761 0.814 - 0.761
73. neb ENSDARG00000032630, ENSDARG00000109273 19493 2.315 - - 0.711 0.716 - - - - 0.888 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
74. myl1 ENSDARG00000014196 98943 2.312 - - 0.715 - - 0.827 - 0.770 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
75. cacna2d1a ENSDARG00000014804 1924 2.31 - - - - - - 0.850 0.728 0.732 calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
76. ms4a17a.14 829 2.304 - - - - - 0.793 0.771 - 0.740 membrane-spanning 4-domains, subfamily A, member 17A.14
77. gyg1b ENSDARG00000059391 389 2.301 - - - - - 0.784 0.788 - 0.729 glycogenin 1b [Source:ZFIN;Acc:ZDB-GENE-040625-30]
78. ablim2 ENSDARG00000055223 1934 2.301 - - - - - 0.770 0.797 - 0.734 actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
79. alpk2 ENSDARG00000079637 1483 2.3 - - - - - 0.731 0.840 - 0.729 alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
80. mlf1 ENSDARG00000077301 789 2.282 - - 0.708 - - 0.720 0.854 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
81. wu:fb15e04 wu:fb15e04 1713 2.263 - - - - - - 0.717 0.721 0.825
82. SYNPO2 SYNPO2 7382 2.26 - - - - - 0.812 - 0.711 0.737
83. bin1 bin1 3199 2.239 - - 0.704 - - - 0.808 - 0.727
84. gapdh ENSDARG00000043457 68684 2.174 - - 0.707 - - 0.734 - 0.733 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
85. sgk2b ENSDARG00000006598 1039 2.154 - - - - - 0.708 0.735 - 0.711 serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
86. tmem182 tmem182 12589 1.849 - - - - - 0.946 0.903 - -
87. cycsb ENSDARG00000044562 40227 1.837 - - - - - 0.891 0.946 - - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
88. chrna1 ENSDARG00000009021 2931 1.81 - - - - - 0.931 0.879 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
89. TRIM63 TRIM63 1600 1.78 - - - - - 0.891 0.889 - -
90. eef2l2 ENSDARG00000035256 6815 1.773 - - - - - - 0.960 0.813 - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
91. trim63 trim63 2437 1.761 - - - - - 0.917 0.844 - -
92. NRAP ENSDARG00000009341 3565 1.757 - - - - - 0.873 0.884 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
93. rp42-pen rp42-pen 3395 1.755 - - - - - 0.898 0.857 - -
94. zgc:92518 ENSDARG00000016343 3837 1.752 - - - - - 0.853 0.899 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
95. mibp2 ENSDARG00000101844 17444 1.751 - - - - - 0.806 0.945 - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
96. mybphb ENSDARG00000003081 5208 1.741 - - - - - - 0.849 - 0.892 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
97. hsp90aa1.1 ENSDARG00000010478 47784 1.74 - - - - - 0.856 0.884 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
98. nid1a ENSDARG00000068710 3948 1.739 - - - - - 0.872 0.867 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
99. smtnl1 ENSDARG00000041257 7410 1.736 - - - - - 0.855 0.881 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
100. SYNPO2L SYNPO2L 6697 1.733 - - - - - 0.921 - - 0.812

There are 1059 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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