Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-255l14.3

Gene Name Gene ID Reads Annotation
si:ch211-255l14.3 si:ch211-255l14.3 2










Genes with expression patterns similar to si:ch211-255l14.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-255l14.3 si:ch211-255l14.3 2 3 - 1.000 - 1.000 - - 1.000 - -
2. panx2 ENSDARG00000063019 3 2 - 1.000 - - - - 1.000 - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
3. cd247l ENSDARG00000077240 25 2 - 1.000 - - - - 1.000 - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
4. ccbl2 4 1.889 - 0.889 - - - - 1.000 - - cysteine conjugate-beta lyase 2, transcript variant X4
5. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.865 - 0.865 - - - - 1.000 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
6. BX465848.3 BX465848.3 4 1.835 - 1.000 - 0.835 - - - - -
7. PPP2R2B PPP2R2B 257 1.822 - 1.000 - - - - 0.822 - -
8. si:ch211-209f23.3 ENSDARG00000095607 15 1.8 - - - 0.800 - - 1.000 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
9. mcph1 ENSDARG00000058372 51 1.751 - 0.751 - - - - 1.000 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
10. vcpip1 ENSDARG00000060177 56 1.739 - 0.973 - - - - 0.766 - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
11. NINJ1 ENSDARG00000103663 43 1.718 - 1.000 - - - - 0.718 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
12. trim23 ENSDARG00000069420 103 1.668 - 0.894 - - - - 0.774 - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
13. si:ch73-167f18.4 si:ch73-167f18.4 9 1.625 - 0.701 - - - - 0.924 - -
14. BEND2_1 BEND2_1 45 1.535 - - - 0.817 - - 0.718 - -
15. zgc:154055 ENSDARG00000103924 452 1 - 1.000 - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
16. CABZ01086544.1 CABZ01086544.1 0 1 - - - 1.000 - - - - -
17. BX294190.1 BX294190.1 17 1 - - - 1.000 - - - - -
18. si:ch211-212i14.2 si:ch211-212i14.2 9 1 - - - 1.000 - - - - -
19. C2CD4C C2CD4C 4 1 - 1.000 - - - - - - -
20. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - - - - 1.000 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
21. SLC16A7 ENSDARG00000098258 4 1 - 1.000 - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
22. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1 - - - - - - 1.000 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
23. fasn_1 ENSDARG00000087657 31 1 - 1.000 - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
24. CAMSAP2 CAMSAP2 109 1 - - - - - - 1.000 - -
25. ino80da ENSDARG00000104727 8 1 - 1.000 - - - - - - - INO80 complex subunit Da [Source:ZFIN;Acc:ZDB-GENE-091204-416]
26. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - - - - - - 1.000 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
27. si:dkeyp-82h4.3 ENSDARG00000102062 0 1 - - - 1.000 - - - - - si:dkeyp-82h4.3 [Source:ZFIN;Acc:ZDB-GENE-120709-17]
28. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 - - - - - - 1.000 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
29. CR854829.1 ENSDARG00000101518 17 1 - - - - - - 1.000 - -
30. ZNF384 ZNF384 3 1 - - - 1.000 - - - - -
31. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - 1.000 - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
32. calhm2 ENSDARG00000039482 138 1 - 1.000 - - - - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
33. ZNF219 ENSDARG00000079738 1 1 - 1.000 - - - - - - - zinc finger protein 219 [Source:ZFIN;Acc:ZDB-GENE-110623-1]
34. CABZ01078124.1 CABZ01078124.1 4 1 - 1.000 - - - - - - -
35. HMGXB3 ENSDARG00000077823 2 1 - - - 1.000 - - - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
36. slc45a3 ENSDARG00000075975 1 1 - - - 1.000 - - - - - solute carrier family 45, member 3 [Source:ZFIN;Acc:ZDB-GENE-070509-3]
37. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - 1.000 - -
38. C3AR1 18 1 - 1.000 - - - - - - - C3a anaphylatoxin chemotactic receptor
39. TMEM74B ENSDARG00000078868 45 1 - - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
40. C12H10orf107 C12H10orf107 8 1 - 1.000 - - - - - - -
41. rhoab ENSDARG00000094673 26 1 - - - - - - 1.000 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
42. samd10b ENSDARG00000094377 18 1 - 1.000 - - - - - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
43. spc24 ENSDARG00000093622 9 1 - 1.000 - - - - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-456]
44. hcrt ENSDARG00000070932 4 1 - - - - - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
45. BX248582.3 BX248582.3 3 1 - - - 1.000 - - - - -
46. smarcd3b ENSDARG00000019969 11 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
47. v2ra20 ENSDARG00000094862 0 1 - - - - - - 1.000 - - vomeronasal 2 receptor, a20 [Source:ZFIN;Acc:ZDB-GENE-050419-220]
48. nlgn4b 1 1 - 1.000 - - - - - - - neuroligin 4b, transcript variant X1
49. BX004873.2 BX004873.2 19 1 - 1.000 - - - - - - -
50. kdm2ba ENSDARG00000036593 96 1 - - - - - - 1.000 - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
51. mapkap1 ENSDARG00000091777 8 1 - - - - - - 1.000 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
52. CABZ01044048.1 ENSDARG00000011463 20 1 - 1.000 - - - - - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
53. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 - - - - - - 1.000 - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
54. CABZ01088346.1 ENSDARG00000099362 30 1 - 1.000 - - - - - - -
55. mir199-2 mir199-2 38 1 - 1.000 - - - - - - -
56. BX908759.1 BX908759.1 52 1 - 1.000 - - - - - - -
57. ppp1r37_1 ENSDARG00000078458 36 1 - - - - - - 1.000 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
58. crp6 ENSDARG00000071457 2 1 - - - 1.000 - - - - - C-reactive protein 6 [Source:ZFIN;Acc:ZDB-GENE-060503-881]
59. slc6a4b ENSDARG00000057017 18 1 - - - 1.000 - - - - - solute carrier family 6 (neurotransmitter transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-060314-2]
60. ASCC3 ENSDARG00000086678 1 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
61. si:dkey-88l16.5 ENSDARG00000094850 12 1 - 1.000 - - - - - - - si:dkey-88l16.5 [Source:ZFIN;Acc:ZDB-GENE-091204-332]
62. ENSDARG00000091766 ENSDARG00000091766 15 1 - - - - - - 1.000 - -
63. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1 - 1.000 - - - - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
64. BX511266.1 BX511266.1 21 1 - 1.000 - - - - - - -
65. FCF1 ENSDARG00000102333 59 1 - - - - - - 1.000 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
66. si:dkey-34m19.5 si:dkey-34m19.5 17 1 - 1.000 - - - - - - -
67. si:dkey-10f21.16 si:dkey-10f21.16 252 1 - - - - - - 1.000 - -
68. insl3 ENSDARG00000035862 1 1 - - - - - - 1.000 - - insulin-like 3 (Leydig cell) [Source:ZFIN;Acc:ZDB-GENE-050310-5]
69. URB1 ENSDARG00000060308 78 1 - - - - - - 1.000 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
70. barx1 ENSDARG00000007407 344 1 - - - - - - 1.000 - - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
71. si:dkey-71b5.3 ENSDARG00000095522 1 1 - 1.000 - - - - - - - si:dkey-71b5.3 [Source:ZFIN;Acc:ZDB-GENE-100922-91]
72. znf536 ENSDARG00000103648 6 1 - - - - - - 1.000 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
73. large 9 1 - - - 1.000 - - - - - like-glycosyltransferase, transcript variant X1
74. foxm1 ENSDARG00000003200 8 1 - - - - - - 1.000 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
75. AL953879.1 AL953879.1 5 1 - 1.000 - - - - - - -
76. si:dkey-101d6.4 si:dkey-101d6.4 6 1 - - - 1.000 - - - - -
77. CD44 CD44 11 1 - - - 1.000 - - - - -
78. TRIM14_8 TRIM14_8 5 1 - - - 1.000 - - - - -
79. si:dkey-98j1.5 ENSDARG00000094005 10 1 - 1.000 - - - - - - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
80. cog6 ENSDARG00000103149 39 1 - - - - - - 1.000 - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
81. PRICKLE2 PRICKLE2 69 1 - - - - - - 1.000 - -
82. btr29 ENSDARG00000099138 5 1 - - - 1.000 - - - - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
83. slc8a4a ENSDARG00000055154 90 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
84. tceanc2 ENSDARG00000062919 32 1 - - - - - - 1.000 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
85. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
86. si:ch211-240g9.1 36 1 - - - - - - 1.000 - - si:ch211-240g9.1
87. nr0b2b ENSDARG00000102756 2 1 - - - 1.000 - - - - - nuclear receptor subfamily 0, group B, member 2b [Source:ZFIN;Acc:ZDB-GENE-080403-9]
88. CABZ01071909.3 CABZ01071909.3 14 1 - 1.000 - - - - - - -
89. ddrgk1 ENSDARG00000037172 14 1 - - - 1.000 - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
90. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1 - 1.000 - - - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
91. si:dkey-96l17.6 ENSDARG00000094540 4 1 - - - - - - 1.000 - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
92. FAM150A 14 1 - - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
93. FAM177B 9 1 - 1.000 - - - - - - - family with sequence similarity 177 member B
94. FAM132B FAM132B 39 1 - 1.000 - - - - - - -
95. CU693477.1 CU693477.1 7 1 - 1.000 - - - - - - -
96. BX927314.1 BX927314.1 47 1 - - - - - - 1.000 - -
97. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - 1.000 - - - - -
98. U4_1 U4_1 2 1 - - - - - - 1.000 - -
99. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 - - - - - - 1.000 - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
100. gbp2 ENSDARG00000038669 91 1 - 1.000 - - - - - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]

There are 590 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA