Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-255i3.4

Gene Name Gene ID Reads Annotation
si:ch211-255i3.4 ENSDARG00000095152 7 si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]










Genes with expression patterns similar to si:ch211-255i3.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-255i3.4 ENSDARG00000095152 7 5 1.000 1.000 - - - 1.000 - 1.000 1.000 si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
2. gyg2 ENSDARG00000033380 12 2 - 1.000 - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
3. CABZ01069081.1 CABZ01069081.1 16 2 1.000 - - - - 1.000 - - -
4. zp2.5 ENSDARG00000086522 15 2 1.000 - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
5. asic2 ENSDARG00000006849 18 2 1.000 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
6. AL929453.1 ENSDARG00000115950 31 1.864 - 1.000 - - - 0.864 - - -
7. serpine3 ENSDARG00000057108 49 1.825 0.825 - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
8. si:ch211-283l16.1 ENSDARG00000112586 131 1.808 - 0.808 - - - 1.000 - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
9. edn1 ENSDARG00000036912 74 1.808 1.000 0.808 - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
10. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.808 1.000 0.808 - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
11. ubxn10 ENSDARG00000052535 24 1.771 1.000 - - - - - - - 0.771 UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
12. RNF14 ENSDARG00000043905 41 1.749 1.000 - - - - 0.749 - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
13. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.744 - - - - - 1.000 - - 0.744
14. cacnb2a ENSDARG00000099045 374 1.735 1.000 - - - - 0.735 - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
15. BX322608.1 ENSDARG00000111690 326 1.734 - - - - - 1.000 - - 0.734
16. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.728 - - - - - 1.000 - - 0.728 pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
17. bmpr2b ENSDARG00000020057 8 1.722 1.000 - - - - - - 0.722 - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
18. LRRC71 LRRC71 11 1.713 - - - - - 1.000 - - 0.713
19. BX119963.1 ENSDARG00000096135 28 1.712 1.000 0.712 - - - - - - -
20. ANK1_1 ANK1_1 507 1.542 - 0.825 - - - 0.717 - - -
21. hoxa1a ENSDARG00000104307 29 1.483 0.746 - - - - - - - 0.737 homeobox A1a [Source:ZFIN;Acc:ZDB-GENE-000823-5]
22. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
23. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - - 1.000 - - -
24. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
25. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
26. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1 1.000 - - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
27. svilb_1 ENSDARG00000014651 60 1 - 1.000 - - - - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
28. anks1aa ENSDARG00000062396 1 1 1.000 - - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
29. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
30. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
31. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
32. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 1.000 - - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
33. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
34. ddr2b ENSDARG00000058695 7 1 - - - - - - - 1.000 - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
35. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
36. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
37. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
38. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
39. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - 1.000 - - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
40. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
41. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
42. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
43. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
44. BX649417.1 ENSDARG00000117387 1 1 - 1.000 - - - - - - -
45. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
46. CCDC18 ENSDARG00000078822 5 1 1.000 - - - - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
47. ppid_1 ENSDARG00000038835 4 1 1.000 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
48. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - - - - - 1.000 - - -
49. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1 1.000 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
50. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
51. gprc6a ENSDARG00000005371 7 1 - 1.000 - - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
52. ODF3L2 40 1 - 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
53. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
54. si:ch211-13o20.1 si:ch211-13o20.1 30 1 1.000 - - - - - - - -
55. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 1.000 - - - - - - - -
56. psma6l ENSDARG00000043899 3 1 - 1.000 - - - - - - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
57. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
58. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
59. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
60. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
61. CLEC17A CLEC17A 42 1 - 1.000 - - - - - - -
62. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
63. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
64. cnnm4 cnnm4 2 1 - 1.000 - - - - - - -
65. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
66. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
67. CABZ01079442.1 CABZ01079442.1 1 1 - - - - - - - 1.000 -
68. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
69. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
70. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
71. si:dkey-250k15.4 ENSDARG00000092169 19 1 - 1.000 - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
72. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
73. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
74. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 - - - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
75. si:dkey-7i4.1 ENSDARG00000086897 2 1 - 1.000 - - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
76. ptk2.2 ptk2.2 3 1 - 1.000 - - - - - - -
77. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
78. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
79. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
80. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
81. CLDND1_1 CLDND1_1 50 1 - 1.000 - - - - - - -
82. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
83. ebi3 ENSDARG00000053620 5 1 - 1.000 - - - - - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
84. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
85. si:ch211-106h4.9 ENSDARG00000075706 36 1 - 1.000 - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
86. PPP1R16A ENSDARG00000076980 40 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
87. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
88. grpr ENSDARG00000056620 66 1 - - - - - 1.000 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
89. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
90. sult2st3 ENSDARG00000028367 79 1 1.000 - - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
91. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
92. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -
93. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
94. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - 1.000 - - - - - - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
95. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
96. tceanc2 ENSDARG00000062919 32 1 - - - - - 1.000 - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
97. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - 1.000 - - - - - - -
98. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
99. RAB27B ENSDARG00000087762 3 1 - - - - - - - 1.000 - RAB27B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-120215-85]
100. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]

There are 934 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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