Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-255f4.2

Gene Name Gene ID Reads Annotation
si:ch211-255f4.2 ENSDARG00000098898 6 si:ch211-255f4.2 [Source:ZFIN;Acc:ZDB-GENE-050208-708]










Genes with expression patterns similar to si:ch211-255f4.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-255f4.2 ENSDARG00000098898 6 4 - - 1.000 - 1.000 - - 1.000 1.000 si:ch211-255f4.2 [Source:ZFIN;Acc:ZDB-GENE-050208-708]
2. col8a1b ENSDARG00000003533 18 1.865 - - 0.961 - - - - - 0.904 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
3. prkacbb ENSDARG00000059125 7 1 - - 1.000 - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
4. BRINP3 BRINP3 11 1 - - 1.000 - - - - - -
5. entpd8 ENSDARG00000005565 18 1 - - - - 1.000 - - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
6. CR759907.3 CR759907.3 3 1 - - 1.000 - - - - - -
7. si:ch211-153f2.3 ENSDARG00000098980 66 1 - - 1.000 - - - - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
8. gba ENSDARG00000076058 1 1 - - 1.000 - - - - - - glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
9. pde6b ENSDARG00000011671 44 1 - - 1.000 - - - - - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
10. si:dkey-106l3.7 ENSDARG00000093444 29 0.992 - - - - 0.992 - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
11. si:dkey-100h21.2 si:dkey-100h21.2 30 0.983 - - - - 0.983 - - - -
12. htr1bd htr1bd 8 0.983 - - - - 0.983 - - - -
13. EPS15L1 EPS15L1 22 0.983 - - - - 0.983 - - - -
14. CAMKK1 CAMKK1 2 0.983 - - - - 0.983 - - - -
15. si:ch73-299h12.1_1 ENSDARG00000102321 8 0.983 - - - - 0.983 - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
16. ATP5J_1 ATP5J_1 15 0.983 - - - - 0.983 - - - -
17. TRIM35_9 TRIM35_9 1 0.983 - - - - 0.983 - - - -
18. BX119910.2 BX119910.2 2 0.983 - - - - 0.983 - - - -
19. CR855257.1 ENSDARG00000094941 1 0.983 - - - - 0.983 - - - -
20. tmprss13b ENSDARG00000077573 47 0.983 - - - - 0.983 - - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
21. CU469500.4 CU469500.4 2 0.983 - - - - 0.983 - - - -
22. tyrobp ENSDARG00000094894 16 0.983 - - - - 0.983 - - - - TYRO protein tyrosine kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-061130-2]
23. CABZ01025393.1 CABZ01025393.1 37 0.983 - - - - 0.983 - - - -
24. BX530067.1 BX530067.1 20 0.979 - - - - 0.979 - - - -
25. si:ch211-102g22.3 si:ch211-102g22.3 2 0.974 - - - - 0.974 - - - -
26. lmbrd2a ENSDARG00000099566 15 0.974 - - - - 0.974 - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
27. BX324215.3 BX324215.3 12 0.974 - - - - 0.974 - - - -
28. si:dkey-164k14.1 si:dkey-164k14.1 5 0.971 - - - - 0.971 - - - -
29. ptx3b ENSDARG00000079515 10 0.968 - - - - 0.968 - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
30. arhgap23b ENSDARG00000026840 6 0.968 - - - - 0.968 - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
31. itln2 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 2 0.968 - - - - 0.968 - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
32. si:ch73-27e22.5 si:ch73-27e22.5 10 0.961 - - 0.961 - - - - - -
33. BX004873.2 BX004873.2 19 0.96 - - - - 0.960 - - - -
34. lcp2a ENSDARG00000055955 23 0.955 - - - - - - - - 0.955 lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
35. plce1 ENSDARG00000087921 44 0.952 - - - - 0.952 - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
36. CR751224.1 ENSDARG00000106298 8 0.95 - - - - 0.950 - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
37. trim105 ENSDARG00000099885 9 0.948 - - - - 0.948 - - - - tripartite motif containing 105 [Source:ZFIN;Acc:ZDB-GENE-060810-140]
38. ppp1r42 ENSDARG00000057632 32 0.946 - - - - 0.946 - - - - protein phosphatase 1, regulatory subunit 42 [Source:ZFIN;Acc:ZDB-GENE-040704-43]
39. FAM177A1 ENSDARG00000079636 19 0.941 - - 0.941 - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
40. mtus2 mtus2 22 0.937 - - - - 0.937 - - - -
41. FAM124B ENSDARG00000087489 16 0.932 - - - - 0.932 - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
42. si:dkey-261j4.4 ENSDARG00000035150 32 0.928 - - - - - - - - 0.928 si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
43. uprt ENSDARG00000035549, ENSDARG00000110518 2 0.928 - - - - - - - - 0.928 uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2411]
44. si:dkey-211g8.6 ENSDARG00000063088 19 0.926 - - - - 0.926 - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
45. ENSDARG00000075665 ENSDARG00000075665 5 0.925 - - - - 0.925 - - - -
46. scd ENSDARG00000033662 146 0.907 - - - - - - - - 0.907 stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
47. zgc:114046 ENSDARG00000091728 68 0.905 - - - - - - - 0.905 - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
48. irf1a ENSDARG00000043492 5 0.904 - - - - - - - - 0.904 interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]
49. dusp3b ENSDARG00000060130 3 0.904 - - - - - - - - 0.904 dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
50. pcdh1g2 ENSDARG00000101232 5 0.904 - - - - - - - - 0.904 protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
51. ZNRF4 ZNRF4 16 0.904 - - - - - - - - 0.904
52. papd4_1 6 0.904 - - - - - - - - 0.904 PAP associated domain containing 4, transcript variant X1
53. si:ch211-190p8.2 ENSDARG00000088276 1 0.904 - - - - - - - - 0.904 si:ch211-190p8.2 [Source:ZFIN;Acc:ZDB-GENE-070424-145]
54. si:ch211-244b2.3 ENSDARG00000069244 19 0.904 - - - - - - - - 0.904 si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
55. WDR7 2 0.904 - - - - - - - - 0.904 WD repeat domain 7
56. U3_4 U3_4 2 0.904 - - - - - - - - 0.904
57. CU570791.1 ENSDARG00000098597 4 0.904 - - - - - - - - 0.904 NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
58. CU182107.2 ENSDARG00000112862 2 0.904 - - - - - - - - 0.904
59. CABZ01075947.1 CABZ01075947.1 2 0.904 - - - - - - - - 0.904
60. si:dkey-121j17.5 ENSDARG00000014232 18 0.904 - - - - - - - - 0.904 si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
61. si:ch211-57m13.9 ENSDARG00000095884 10 0.904 - - - - - - - - 0.904 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
62. paqr8 ENSDARG00000088828 4 0.904 - - - - - - - - 0.904 progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
63. adamts13 ENSDARG00000076270 8 0.904 - - - - - - - - 0.904 ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
64. Metazoa_SRP_6 Metazoa_SRP_6 7 0.904 - - - - - - - - 0.904
65. EXD1 ENSDARG00000098669 27 0.904 - - - - - - - - 0.904 exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
66. si:ch211-186e20.7 ENSDARG00000077960 1 0.904 - - - - - - - - 0.904 si:ch211-186e20.7 [Source:ZFIN;Acc:ZDB-GENE-110407-6]
67. ints12_1 ENSDARG00000091678 11 0.904 - - - - - - - - 0.904 integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
68. si:ch211-278p9.1 ENSDARG00000087532 18 0.904 - - - - - - - - 0.904 si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
69. Metazoa_SRP_27 Metazoa_SRP_27 2 0.904 - - - - - - - - 0.904
70. zgc:158856 zgc:158856 23 0.903 - - - - 0.903 - - - -
71. LETMD1 ENSDARG00000030641, ENSDARG00000110586 13 0.894 - - - - 0.894 - - - - LETM1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080723-8]
72. si:dkey-25i10.5 si:dkey-25i10.5 18 0.891 - - - - 0.891 - - - -
73. ldb2a ENSDARG00000019579 26 0.889 - - - - 0.889 - - - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
74. BX901892.1 BX901892.1 3 0.886 - - - - 0.886 - - - -
75. PRR5L PRR5L 408 0.885 - - - - 0.885 - - - -
76. si:ch73-233m11.2 ENSDARG00000091859 2 0.884 - - - - - - - - 0.884 si:ch73-233m11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-266]
77. mapk9 ENSDARG00000077364 38 0.884 - - - - - - - - 0.884 mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
78. bckdhb ENSDARG00000014676 17 0.883 - - - - 0.883 - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
79. CCDC57_1 CCDC57_1 35 0.88 - - - - - - - 0.880 -
80. SFT2D2_1 SFT2D2_1 219 0.88 - - - - - - - 0.880 -
81. or115-7 ENSDARG00000044338 1 0.88 - - - - - - - 0.880 - odorant receptor, family F, subfamily 115, member 7 [Source:ZFIN;Acc:ZDB-GENE-070806-9]
82. CU302413.1 ENSDARG00000101202 1 0.88 - - - - - - - 0.880 -
83. or128-1 ENSDARG00000105730 1 0.88 - - - - - - - 0.880 - odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
84. taar14f ENSDARG00000088859, ENSDARG00000114926 1 0.88 - - - - - - - 0.880 - trace amine associated receptor 14f [Source:ZFIN;Acc:ZDB-GENE-041210-313]
85. zgc:136254 ENSDARG00000068465 27 0.88 - - - - - - - 0.880 - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
86. si:dkey-14o6.8 ENSDARG00000103239 3 0.88 - - - - - - - 0.880 - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
87. htr6 ENSDARG00000016095 9 0.88 - - - - - - - 0.880 - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
88. si:dkey-286j17.3 si:dkey-286j17.3 8 0.88 - - - - - - - 0.880 -
89. CR855307.2 CR855307.2 1 0.88 - - - - - - - 0.880 -
90. si:ch211-15p9.2 ENSDARG00000062241 1 0.88 - - - - - - - 0.880 - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
91. si:dkey-29b11.3 ENSDARG00000087388 29 0.88 - - - - - - - 0.880 - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
92. or115-12 ENSDARG00000044748 2 0.88 - - - - - - - 0.880 - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
93. cd22 ENSDARG00000053005 3 0.88 - - - - - - - 0.880 - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
94. sntg2 ENSDARG00000101660 19 0.88 - - - - - - - 0.880 - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
95. or120-1 ENSDARG00000100663 0 0.88 - - - - - - - 0.880 - odorant receptor, family E, subfamily 120, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-15]
96. si:dkey-165g20.2 si:dkey-165g20.2 3 0.88 - - - - - - - 0.880 -
97. CR385022.1 CR385022.1 0 0.88 - - - - - - - 0.880 -
98. si:ch211-167b20.7 si:ch211-167b20.7 3 0.88 - - - - - - - 0.880 -
99. CU915534.1 ENSDARG00000105830 1 0.88 - - - - - - - 0.880 -
100. PDE9A_1 PDE9A_1 1 0.88 - - - - - - - 0.880 -

There are 245 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA