Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-255f4.11

Gene Name Gene ID Reads Annotation
si:ch211-255f4.11 ENSDARG00000102099, ENSDARG00000117185 2 si:ch211-255f4.11 [Source:ZFIN;Acc:ZDB-GENE-050208-387]










Genes with expression patterns similar to si:ch211-255f4.11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-255f4.11 ENSDARG00000102099, ENSDARG00000117185 2 2 - - 1.000 - - - - - 1.000 si:ch211-255f4.11 [Source:ZFIN;Acc:ZDB-GENE-050208-387]
2. si:dkey-18j14.4 si:dkey-18j14.4 60 1.642 - - 0.728 - - - - - 0.914
3. cacna1aa ENSDARG00000037905 4 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
4. PEG3_24 PEG3_24 5 1 - - 1.000 - - - - - -
5. HTR7 17 1 - - 1.000 - - - - - - 5-hydroxytryptamine receptor 7
6. si:dkey-27f16.4 si:dkey-27f16.4 4 1 - - 1.000 - - - - - -
7. pcsk5a ENSDARG00000067537 44 1 - - 1.000 - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
8. fars2 ENSDARG00000091247 1 1 - - 1.000 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
9. rgs9a ENSDARG00000037925 3 1 - - 1.000 - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
10. CABZ01031738.1 CABZ01031738.1 1 1 - - 1.000 - - - - - -
11. BX276122.1 BX276122.1 1 1 - - 1.000 - - - - - -
12. ttc25 ENSDARG00000058140 2 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
13. ptgfr ENSDARG00000074016 1 1 - - 1.000 - - - - - - prostaglandin F receptor (FP) [Source:ZFIN;Acc:ZDB-GENE-120919-6]
14. si:dkey-11o1.2 ENSDARG00000095772 1 1 - - 1.000 - - - - - - si:dkey-11o1.2 [Source:ZFIN;Acc:ZDB-GENE-100921-76]
15. CABZ01053592.1 ENSDARG00000117388 6 1 - - 1.000 - - - - - -
16. CABZ01102040.1 CABZ01102040.1 1 1 - - 1.000 - - - - - -
17. BX927369.2 BX927369.2 9 1 - - 1.000 - - - - - -
18. GABRA3 ENSDARG00000090883 5 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
19. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - - 1.000 - - - - - -
20. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - 1.000 - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
21. FAM120B ENSDARG00000030804 1 1 - - 1.000 - - - - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
22. CR759920.1 CR759920.1 4 1 - - 1.000 - - - - - -
23. BX571823.1 BX571823.1 2 1 - - 1.000 - - - - - -
24. serinc2l ENSDARG00000053425 5 1 - - 1.000 - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
25. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - 1.000 - - - - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
26. allc ENSDARG00000042562 12 1 - - 1.000 - - - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
27. fibinb ENSDARG00000087196, ENSDARG00000110737 53 1 - - 1.000 - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
28. TNPO1 ENSDARG00000035390 1 1 - - 1.000 - - - - - - transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
29. znf804b ENSDARG00000103396 11 1 - - 1.000 - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
30. si:ch211-106h4.4 ENSDARG00000093629 9 1 - - 1.000 - - - - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
31. THBD ENSDARG00000092470 1 1 - - 1.000 - - - - - - thrombomodulin [Source:ZFIN;Acc:ZDB-GENE-110411-281]
32. ENSDARG00000086653 ENSDARG00000086653 14 1 - - 1.000 - - - - - -
33. tagln ENSDARG00000045408 48 1 - - 1.000 - - - - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
34. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - 1.000 - - - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
35. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - 1.000 - - - - - -
36. KCNQ4 ENSDARG00000089490 1 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-120215-132]
37. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1 - - 1.000 - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
38. si:dkey-114b16.5 si:dkey-114b16.5 5 1 - - 1.000 - - - - - -
39. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - 1.000 - - - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
40. itih6 ENSDARG00000056037 3 1 - - 1.000 - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
41. sh3bp1 ENSDARG00000078119 5 1 - - 1.000 - - - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
42. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - 1.000 - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
43. zgc:194659 ENSDARG00000079347 17 1 - - 1.000 - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
44. pdzrn3a ENSDARG00000073757 1 1 - - 1.000 - - - - - - PDZ domain containing RING finger 3a [Source:ZFIN;Acc:ZDB-GENE-090313-307]
45. CU984579.1 ENSDARG00000116863 15 1 - - 1.000 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
46. PHKA1 PHKA1 10 1 - - 1.000 - - - - - -
47. ighd ENSDARG00000096248 1 1 - - 1.000 - - - - - - immunoglobulin heavy constant delta [Source:ZFIN;Acc:ZDB-GENE-040513-9]
48. CABZ01048675.1 CABZ01048675.1 4 1 - - 1.000 - - - - - -
49. MYO7B MYO7B 8 1 - - 1.000 - - - - - -
50. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - 1.000 - - - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
51. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - 1.000 - - - - - -
52. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - - 1.000 - - - - - -
53. CABZ01059421.1 CABZ01059421.1 1 1 - - 1.000 - - - - - -
54. CABZ01115881.1 ENSDARG00000086539 2 1 - - 1.000 - - - - - - SH2 domain containing 3A [Source:NCBI gene;Acc:100331568]
55. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - 1.000 - - - - - -
56. LBH ENSDARG00000111701 1 1 - - 1.000 - - - - - - limb bud and heart development [Source:ZFIN;Acc:ZDB-GENE-040426-1613]
57. cep170b ENSDARG00000074636 4 1 - - 1.000 - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
58. CR388164.2 ENSDARG00000096885 1 1 - - 1.000 - - - - - -
59. znf1112 ENSDARG00000095997 2 1 - - 1.000 - - - - - - zinc finger protein 1112 [Source:ZFIN;Acc:ZDB-GENE-110913-179]
60. BX005294.1 ENSDARG00000101338 1 1 - - 1.000 - - - - - -
61. LRFN4_1 LRFN4_1 5 1 - - 1.000 - - - - - -
62. si:dkey-13m3.2 ENSDARG00000103424 15 1 - - 1.000 - - - - - - si:dkey-13m3.2 [Source:ZFIN;Acc:ZDB-GENE-121214-42]
63. CPEB4_1 CPEB4_1 1 1 - - 1.000 - - - - - -
64. BX322608.1 ENSDARG00000111690 326 0.995 - - - - - - - - 0.995
65. si:ch211-243g18.3 si:ch211-243g18.3 3 0.995 - - - - - - - - 0.995
66. nr0b2b ENSDARG00000102756 2 0.995 - - - - - - - - 0.995 nuclear receptor subfamily 0, group B, member 2b [Source:ZFIN;Acc:ZDB-GENE-080403-9]
67. ubxn1 ENSDARG00000090309 17 0.995 - - - - - - - - 0.995 UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
68. si:ch211-199m3.1 ENSDARG00000112587 2 0.995 - - - - - - - - 0.995 si:ch211-199m3.1 [Source:ZFIN;Acc:ZDB-GENE-041014-338]
69. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.995 - - - - - - - - 0.995 si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
70. BX005421.3 ENSDARG00000114309 7 0.995 - - - - - - - - 0.995
71. BX004994.2 BX004994.2 17 0.995 - - - - - - - - 0.995
72. zgc:136895 zgc:136895 41 0.995 - - - - - - - - 0.995
73. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 0.995 - - - - - - - - 0.995 Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
74. il12bb ENSDARG00000054542 6 0.995 - - - - - - - - 0.995 interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
75. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 0.991 - - - - - - - - 0.991 pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
76. itln1 ENSDARG00000007534 8 0.988 - - 0.988 - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
77. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 0.987 - - - - - - - - 0.987
78. irf10 ENSDARG00000027658 7 0.987 - - - - - - - - 0.987 interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
79. si:ch73-261i21.2 ENSDARG00000095975 9 0.976 - - - - - - - - 0.976 si:ch73-261i21.2 [Source:ZFIN;Acc:ZDB-GENE-110411-164]
80. tecta ENSDARG00000059558 15 0.976 - - - - - - - - 0.976 tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
81. LRRC71 LRRC71 11 0.971 - - - - - - - - 0.971
82. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 0.97 - - - - - - - - 0.970 cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
83. ZACN_1 ZACN_1 4 0.969 - - - - - - - - 0.969
84. sergef ENSDARG00000070986, ENSDARG00000111782 48 0.959 - - - - - - - - 0.959 secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
85. klhl36 ENSDARG00000030251, ENSDARG00000113095 32 0.956 - - - - - - - - 0.956 kelch-like family member 36 [Source:ZFIN;Acc:ZDB-GENE-050522-324]
86. stoml3b ENSDARG00000057035 15 0.953 - - 0.953 - - - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
87. si:ch211-209l18.4 ENSDARG00000090847 1 0.953 - - 0.953 - - - - - - si:ch211-209l18.4 [Source:ZFIN;Acc:ZDB-GENE-110411-221]
88. si:dkey-81i14.3 si:dkey-81i14.3 1 0.953 - - 0.953 - - - - - -
89. im:6903943 im:6903943 26 0.953 - - 0.953 - - - - - -
90. myo5b_1 ENSDARG00000062003 6 0.953 - - 0.953 - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
91. akap8l ENSDARG00000099635 2 0.953 - - 0.953 - - - - - - A kinase (PRKA) anchor protein 8-like [Source:ZFIN;Acc:ZDB-GENE-040426-2303]
92. znf536 ENSDARG00000103648 6 0.951 - - 0.951 - - - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
93. si:dkeyp-69b9.6 ENSDARG00000014825 5 0.95 - - - - - - - - 0.950 si:dkeyp-69b9.6 [Source:ZFIN;Acc:ZDB-GENE-100922-227]
94. BIN1 BIN1 11 0.949 - - 0.949 - - - - - -
95. LPHN2_1 LPHN2_1 3 0.949 - - 0.949 - - - - - -
96. ubxn10 ENSDARG00000052535 24 0.944 - - - - - - - - 0.944 UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
97. mylk3 ENSDARG00000076348 19 0.944 - - 0.944 - - - - - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
98. si:dkey-264f17.1 ENSDARG00000100219 1 0.944 - - 0.944 - - - - - - si:dkey-264f17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-6]
99. ptger2a ENSDARG00000011434 6 0.944 - - 0.944 - - - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
100. pkp1a ENSDARG00000090598 6 0.944 - - 0.944 - - - - - - plakophilin 1a [Source:ZFIN;Acc:ZDB-GENE-110411-77]

There are 130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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