Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-255a21.4

Gene Name Gene ID Reads Annotation
si:ch211-255a21.4 si:ch211-255a21.4 26










Genes with expression patterns similar to si:ch211-255a21.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-255a21.4 si:ch211-255a21.4 26 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. SLC7A8 SLC7A8 25 2.62 - 1.000 0.781 0.839 - - - - -
3. mtrf1l ENSDARG00000060005 177 2.522 0.859 - - - - - 0.743 - 0.920 mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
4. rhof ENSDARG00000054389, ENSDARG00000111798 15 2.497 - - - 0.765 0.844 - 0.888 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
5. ARX ARX 71 2 1.000 1.000 - - - - - - -
6. atat1 ENSDARG00000004472 700 1.945 - 1.000 - - - - 0.945 - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
7. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.941 - 1.000 0.941 - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
8. CABZ01089980.1 ENSDARG00000117446 16 1.934 0.934 1.000 - - - - - - -
9. gdf10a ENSDARG00000095378 12 1.893 - 1.000 - - 0.893 - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
10. gdf6b ENSDARG00000005510 106 1.888 - 0.950 - - - - - - 0.938 growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
11. tcf23 ENSDARG00000087381 6 1.888 - 1.000 - - - - 0.888 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
12. BX511189.1 BX511189.1 34 1.888 - 1.000 - - - - 0.888 - -
13. BX470224.1 ENSDARG00000092793 22 1.888 - 1.000 - - - - 0.888 - -
14. arhgef3 ENSDARG00000013834 3 1.883 - 1.000 - - 0.883 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
15. FCHSD2 FCHSD2 35 1.873 1.000 0.873 - - - - - - -
16. ME1 ENSDARG00000053215 8 1.871 - 1.000 - - 0.871 - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
17. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.865 - 1.000 - - - - 0.865 - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
18. si:dkey-97l20.5 si:dkey-97l20.5 33 1.832 - - - - - - 0.868 - 0.964
19. si:dkey-196n19.5 si:dkey-196n19.5 6 1.829 - - 0.941 - - - 0.888 - -
20. CT573468.1 CT573468.1 283 1.816 0.975 - - - - - 0.841 - -
21. tmeff2b ENSDARG00000058699 82 1.812 - 1.000 - - - - 0.812 - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
22. igf3 ENSDARG00000058058 19 1.804 - - 0.941 - - - 0.863 - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
23. si:dkey-11f4.16 ENSDARG00000099799 121 1.789 0.839 - - - - - 0.950 - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
24. si:dkey-78k11.4 ENSDARG00000094399 13 1.784 - - - 0.896 - - 0.888 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
25. si:dkeyp-110e4.11 ENSDARG00000071585 148 1.779 0.991 - 0.788 - - - - - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
26. ca15b ENSDARG00000040510 5 1.766 - - 0.941 - - - 0.825 - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
27. CR855996.2 ENSDARG00000104450 310 1.75 - - - - - - 0.767 - 0.983 ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
28. CDHR2_1 CDHR2_1 12 1.717 - 0.829 - - - - 0.888 - -
29. slc17a9a ENSDARG00000042954 36 1.715 - - - 0.769 - - - - 0.946 solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
30. igsf21b ENSDARG00000056084 6 1.71 - 1.000 - - - - - 0.710 - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
31. GRIK1 GRIK1 1 1.71 - 1.000 - - - - - 0.710 -
32. si:dkey-287f10.2 si:dkey-287f10.2 3 1.71 - 1.000 - - - - - 0.710 -
33. ITPK1 ITPK1 78 1.706 0.782 - - - - - - - 0.924
34. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.706 - - 0.841 - - - - - 0.865
35. TULP2 TULP2 38 1.701 - 1.000 - - - - - - 0.701
36. pou5f3 ENSDARG00000044774 212 1.7 - - - - - - 0.772 - 0.928 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
37. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 1.693 - - - - 0.855 - 0.838 - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
38. lrrk2 ENSDARG00000006169 82 1.691 0.911 0.780 - - - - - - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
39. zgc:165582 ENSDARG00000074362 198 1.691 0.988 - - - - - - - 0.703 zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
40. CABZ01069022.1 ENSDARG00000105692 16 1.686 0.976 - - - - - - 0.710 - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
41. lss ENSDARG00000061274 68 1.685 0.972 0.713 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
42. bbs5 ENSDARG00000039827 211 1.681 - - - - - - 0.924 - 0.757 Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
43. cacnb4b ENSDARG00000062174 159 1.678 - 0.900 - - - - 0.778 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
44. CU183952.1 CU183952.1 32 1.677 - - - - - - 0.784 - 0.893
45. si:dkey-32m20.1 43 1.669 - 0.896 - - - - 0.773 - - si:dkey-32m20.1
46. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1.653 - - - - - - 0.888 0.765 - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
47. BX324003.2 ENSDARG00000109802 178 1.638 - - - - - - 0.886 - 0.752
48. RPS11 ENSDARG00000053058 32 1.634 - 0.900 - 0.734 - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
49. foxred1 ENSDARG00000099705 217 1.633 0.893 - - - - - 0.740 - - FAD-dependent oxidoreductase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080204-64]
50. faxcb ENSDARG00000078981 249 1.621 0.803 0.818 - - - - - - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
51. cpeb1a ENSDARG00000045932 81 1.609 - - - - - - 0.849 - 0.760 cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
52. KLHL2 ENSDARG00000061786 204 1.605 0.844 - - - - - 0.761 - - kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-090312-193]
53. C20H1orf198 C20H1orf198 246 1.599 0.811 - - - - - 0.788 - -
54. si:dkey-4c15.5 si:dkey-4c15.5 36 1.598 - - - - - - 0.888 0.710 -
55. ovca2 ENSDARG00000103748 38 1.597 - 0.709 - - - - 0.888 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
56. arhgef11 ENSDARG00000052482 24 1.596 0.794 0.802 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
57. CR457441.2 CR457441.2 82 1.58 0.858 - - - - - 0.722 - -
58. nanos3 ENSDARG00000068255 319 1.576 0.871 - - - - - 0.705 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
59. si:dkey-12e7.4 ENSDARG00000041073, ENSDARG00000111062 13 1.575 - - 0.794 - - - 0.781 - - si:dkey-12e7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-83]
60. BX004828.1 BX004828.1 31 1.557 - - 0.734 0.823 - - - - -
61. zgc:174654 zgc:174654 54 1.552 - - - - 0.755 - 0.797 - -
62. coro6 ENSDARG00000102272 76 1.539 - 0.784 - - - - 0.755 - - coronin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1202]
63. TTC9 ENSDARG00000074363 196 1.539 - 0.761 - - - - 0.778 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
64. abhd2a ENSDARG00000025797 312 1.511 0.796 - - - - - - - 0.715 abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
65. fem1a ENSDARG00000067966 11 1.485 - 0.704 0.781 - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
66. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1.479 - - - - - - 0.773 - 0.706 tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
67. BAI1_1 BAI1_1 57 1.462 - 0.704 - - 0.758 - - - -
68. mdm1 ENSDARG00000045675 64 1.452 - 0.713 - - - - - - 0.739 Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
69. GPR180 73 1.447 - 0.713 - - - - 0.734 - - G protein-coupled receptor 180, transcript variant X2
70. lppr5b lppr5b 23 1 - 1.000 - - - - - - -
71. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - 1.000 - - - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
72. CMA1_11 CMA1_11 0 1 - 1.000 - - - - - - -
73. zbtb14 ENSDARG00000098273 36 1 1.000 - - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
74. ciz1a ENSDARG00000089781 20 1 - 1.000 - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
75. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
76. si:rp71-1f1.4 ENSDARG00000092476 11 1 - 1.000 - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
77. pag1 ENSDARG00000055875 21 1 - 1.000 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
78. fstl5 ENSDARG00000040198 213 1 - 1.000 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
79. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
80. gphnb ENSDARG00000100851 118 1 - 1.000 - - - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
81. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
82. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1 1.000 - - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
83. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
84. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
85. si:ch211-213i16.4 8 1 - 1.000 - - - - - - - si:ch211-213i16.4, transcript variant X1
86. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
87. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
88. flrt1a 107 1 - - - - - - 1.000 - - fibronectin leucine rich transmembrane protein 1a, transcript variant X2
89. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
90. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
91. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
92. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -
93. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
94. fgfr1b ENSDARG00000011190 10 1 1.000 - - - - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
95. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
96. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
97. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
98. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
99. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
100. CABZ01085177.1 ENSDARG00000104644 6 1 - 1.000 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]

There are 1449 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA