Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-254c8.2

Gene Name Gene ID Reads Annotation
si:ch211-254c8.2 233 si:ch211-254c8.2, transcript variant X4










Genes with expression patterns similar to si:ch211-254c8.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-254c8.2 233 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-254c8.2, transcript variant X4
2. NFRKB ENSDARG00000091512 646 1.897 0.968 - - - - - - 0.929 - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
3. mybl2 mybl2 1341 1.894 0.967 - - - - - - 0.927 -
4. CABZ01088061.1 CABZ01088061.1 695 1.856 - - - - - 0.903 - 0.953 -
5. swt1 ENSDARG00000094010 472 1.841 0.984 - - - - 0.857 - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
6. mknk1 ENSDARG00000018411 749 1.817 - 0.824 - - - - - 0.993 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
7. exd3 ENSDARG00000063140 119 1.79 - - - - - 0.900 0.890 - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
8. neurla neurla 465 1.771 - 0.841 - - - - - 0.930 -
9. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.723 0.988 - - - - - - 0.735 - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
10. si:dkey-169i5.4 ENSDARG00000077862 511 1.72 0.929 - - - - - - - 0.791 si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
11. si:ch211-269i23.2 432 1.716 - - - - - 0.737 - 0.979 - si:ch211-269i23.2, transcript variant X3
12. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.712 0.934 - - - - - - 0.778 - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
13. c7a ENSDARG00000042172 716 1.711 0.936 - - - - - - 0.775 - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
14. klhl18 ENSDARG00000004306 448 1.708 - - - - - - 0.739 0.969 - kelch-like family member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5785]
15. dctd ENSDARG00000036990 2168 1.702 - - - - - 0.773 - 0.929 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
16. DST ENSDARG00000101858 4395 1.692 0.764 - - - - - - 0.928 - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
17. CT583728.14 ENSDARG00000112295 911 1.692 - - - - - - 0.748 0.944 -
18. synj2bp ENSDARG00000028321 1143 1.682 0.969 - - - - - 0.713 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
19. CABZ01039859.1 ENSDARG00000076361 540 1.677 - - - - - - 0.740 0.937 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
20. zgc:154018 zgc:154018 362 1.676 0.900 - - - - - 0.776 - -
21. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.659 - 0.704 - - - - - 0.955 - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
22. tnfrsf1a ENSDARG00000018569 842 1.655 0.946 - - - - - - 0.709 - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
23. si:dkeyp-51b9.3 ENSDARG00000092379 1374 1.642 - - - - - 0.867 0.775 - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
24. hspbp1 ENSDARG00000102937 260 1.641 0.938 0.703 - - - - - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
25. carhsp1 ENSDARG00000053129 2100 1.63 0.742 - - - - - - 0.888 - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
26. mycbp ENSDARG00000091001 1511 1.629 0.919 - - - - 0.710 - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
27. nrp2b ENSDARG00000038446 783 1.62 - - - - - - 0.843 - 0.777 neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
28. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 1.612 0.891 - - - - - 0.721 - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
29. wdr13 ENSDARG00000022974 1283 1.6 0.900 - - - - 0.700 - - - WD repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-050522-274]
30. ebp ENSDARG00000046098 502 1.597 - - - - - 0.864 - 0.733 - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
31. ahsa1l ahsa1l 2366 1.575 0.799 - - - - 0.776 - - -
32. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.566 - - - - - - - 0.731 0.835 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
33. mvd mvd 105 1.561 - - - - - - 0.808 - 0.753
34. C19H1orf85 C19H1orf85 1587 1.559 0.823 - - - - - 0.736 - -
35. zgc:113314 ENSDARG00000069453 833 1.557 - - - - - - - 0.850 0.707 zgc:113314 [Source:ZFIN;Acc:ZDB-GENE-050913-19]
36. chmp1a ENSDARG00000102643 1078 1.556 0.820 0.736 - - - - - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
37. CPN2 CPN2 682 1.524 0.810 - - - - - 0.714 - -
38. gnpnat1 ENSDARG00000039892 709 1.513 - - - - - - - 0.798 0.715 glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
39. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.509 - 0.739 - - - 0.770 - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
40. ccrl1b ccrl1b 154 1.503 - - - - - 0.760 - - 0.743
41. CR383676.3 CR383676.3 2650 1.501 - - - - - - 0.750 0.751 -
42. arhgap10 ENSDARG00000078326 994 1.496 - 0.701 - - - - 0.795 - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
43. acbd5a ENSDARG00000034883 300 1.465 - 0.723 - - - - 0.742 - - acyl-CoA binding domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-268]
44. capn7 ENSDARG00000102987 386 1.439 - - - - - 0.722 - - 0.717 calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
45. BX682234.2 BX682234.2 28 0.999 - - - - - - - 0.999 -
46. FCHSD2 FCHSD2 35 0.999 - - - - - - - 0.999 -
47. CR936337.1 CR936337.1 38 0.999 - - - - - - - 0.999 -
48. si:ch73-67c22.3 si:ch73-67c22.3 30 0.999 - - - - - - - 0.999 -
49. htra3a ENSDARG00000052895 28 0.999 - - - - - - - 0.999 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
50. CR848836.5 CR848836.5 42 0.999 - - - - - - - 0.999 -
51. sv2ba ENSDARG00000057427 33 0.999 - - - - - - - 0.999 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
52. JAKMIP3 ENSDARG00000100708 56 0.999 - - - - - - - 0.999 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
53. styx ENSDARG00000057699 48 0.998 - - - - - - - 0.998 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
54. si:ch211-106h4.9 ENSDARG00000075706 36 0.998 - - - - - - - 0.998 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
55. chrna2b ENSDARG00000057025 217 0.998 - - - - - - - 0.998 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
56. si:ch211-67e16.2 41 0.998 - - - - - - - 0.998 - si:ch211-67e16.2, transcript variant X2
57. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.998 - - - - - - - 0.998 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
58. gcdhl gcdhl 38 0.998 - - - - - - - 0.998 -
59. si:dkey-29n10.3 si:dkey-29n10.3 66 0.997 - - - - - - - 0.997 -
60. CABZ01114089.1 CABZ01114089.1 127 0.997 - - - - - - - 0.997 -
61. CABZ01087562.1 CABZ01087562.1 80 0.997 - - - - - - - 0.997 -
62. cx28.8 ENSDARG00000071042 62 0.997 - - - - - - - 0.997 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
63. si:dkey-10g2.5 si:dkey-10g2.5 72 0.996 - - - - - - - 0.996 -
64. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.995 - - - - - - - 0.995 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
65. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.995 - - - - - - - 0.995 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
66. dnah9l ENSDARG00000062630 268 0.995 - - - - - - - 0.995 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
67. cacnb2a ENSDARG00000099045 374 0.994 - - - - - - - 0.994 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
68. MYLK4 MYLK4 180 0.993 - - - - - - - 0.993 -
69. ACOT12 ENSDARG00000054534 61 0.993 0.993 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
70. aars2 ENSDARG00000107385 190 0.992 - - - - - - - 0.992 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
71. CU234171.2 CU234171.2 86 0.992 - - - - - - - 0.992 -
72. trim25l ENSDARG00000020863 292 0.992 0.992 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
73. mlh1 ENSDARG00000025948 130 0.992 - - - - - - - 0.992 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
74. vps11 ENSDARG00000036338 421 0.992 0.992 - - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
75. trabd ENSDARG00000010445 195 0.992 - - - - - - - 0.992 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
76. fam155a ENSDARG00000075858 91 0.991 0.991 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
77. si:ch211-270n8.3 87 0.991 0.991 - - - - - - - - si:ch211-270n8.3, transcript variant X2
78. ing5a ENSDARG00000022413 268 0.991 0.991 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
79. fbxo7 ENSDARG00000099833 304 0.99 - - - - - - - 0.990 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
80. PTPDC1 PTPDC1 30 0.99 0.990 - - - - - - - -
81. gdap1l1 ENSDARG00000028628 233 0.99 0.990 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
82. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.99 0.990 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
83. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.99 0.990 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
84. ugt5b4 ENSDARG00000091916 130 0.99 0.990 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
85. actr5 ENSDARG00000098235 237 0.99 0.990 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
86. si:ch211-157l15.4 si:ch211-157l15.4 92 0.99 0.990 - - - - - - - -
87. SNAPC2 ENSDARG00000036473 158 0.99 - - - - - - - 0.990 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
88. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.99 0.990 - - - - - - - -
89. rhogb ENSDARG00000004301 358 0.989 0.989 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
90. rab20 ENSDARG00000005049 346 0.989 - - - - - - - 0.989 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
91. pycr1 pycr1 1258 0.989 0.989 - - - - - - - -
92. phf19 ENSDARG00000078050 117 0.989 - - - - - - - 0.989 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
93. si:dkey-11f4.16 ENSDARG00000099799 121 0.989 - - - - - - - 0.989 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
94. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.989 - - - - - - - 0.989 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
95. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.988 - - - - - - - 0.988 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
96. rad23aa ENSDARG00000020001 374 0.988 - - - - - - - 0.988 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
97. pcnxl3 pcnxl3 756 0.988 0.988 - - - - - - - -
98. arhgap19 ENSDARG00000083189 210 0.988 0.988 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
99. STIM2 STIM2 644 0.987 - - - - - - - 0.987 -
100. rbm27 ENSDARG00000060521 185 0.987 - - - - - - - 0.987 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]

There are 1435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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