Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-253b18.3

Gene Name Gene ID Reads Annotation
si:ch211-253b18.3 si:ch211-253b18.3 4










Genes with expression patterns similar to si:ch211-253b18.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-253b18.3 si:ch211-253b18.3 4 4 - 1.000 - - 1.000 - - 1.000 1.000
2. iffo1a ENSDARG00000062976 5 2 - - - - 1.000 - - - 1.000 intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
3. si:dkeyp-109b10.4 si:dkeyp-109b10.4 23 1.896 - 0.992 - - 0.904 - - - -
4. znf536 ENSDARG00000103648 6 1.857 - - - - 1.000 - - - 0.857 zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
5. FRMD7 ENSDARG00000068958 17 1.833 - - - - - - - 0.894 0.939 FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
6. uox ENSDARG00000007024 205 1.81 - 0.990 - - - - - 0.820 - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
7. ftr03 8 1.744 - - - - 1.000 - - - 0.744 finTRIM family, member 3
8. SPINK4 ENSDARG00000091609 44 1.559 - 0.745 - - - - - - 0.814 serine peptidase inhibitor, Kazal type 4 [Source:ZFIN;Acc:ZDB-GENE-130821-1]
9. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.508 - - - - - - - 0.714 0.794 zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
10. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - 1.000 - - - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
11. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - 1.000 - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
12. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - 1.000 - - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
13. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
14. nrxn3a ENSDARG00000043746 54 1 - 1.000 - - - - - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
15. KHNYN ENSDARG00000092488 10 1 - 1.000 - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
16. CABZ01021426.1 CABZ01021426.1 25 1 - 1.000 - - - - - - -
17. si:ch211-224l10.4 ENSDARG00000088762 36 1 - 1.000 - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
18. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
19. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
20. si:ch211-209j10.5 si:ch211-209j10.5 13 1 - - - - - - - 1.000 -
21. ARHGAP6 33 1 - 1.000 - - - - - - - Rho GTPase activating protein 6
22. si:dkey-58f10.12 ENSDARG00000092680 258 1 - 1.000 - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
23. si:dkey-24i24.3 ENSDARG00000088452 27 1 - 1.000 - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
24. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
25. CR812472.2 ENSDARG00000097380 62 1 - 1.000 - - - - - - -
26. LRRC2 LRRC2 23 1 - 1.000 - - - - - - -
27. TSPAN17 ENSDARG00000114067 3 1 - 1.000 - - - - - - - tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673]
28. si:dkey-31k12.2 si:dkey-31k12.2 1 1 - - - - - - - 1.000 -
29. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
30. dpyda dpyda 12 1 - - - - - - - 1.000 -
31. U5_6 U5_6 0 1 - - - - 1.000 - - - -
32. SORT1 SORT1 33 1 - - - - - - - - 1.000
33. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
34. FAM160A1 FAM160A1 1 1 - - - - - - - 1.000 -
35. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
36. rce1a ENSDARG00000077909 4 1 - - - - 1.000 - - - - Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
37. TRPC4 TRPC4 18 1 - 1.000 - - - - - - -
38. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
39. HMHA1 HMHA1 2 1 - - - - 1.000 - - - -
40. BX005256.5 BX005256.5 25 1 - - - - 1.000 - - - -
41. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
42. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - - - 1.000 -
43. si:dkey-119g10.5 si:dkey-119g10.5 1 1 - - - - 1.000 - - - -
44. zgc:165627 zgc:165627 4 1 - - - - 1.000 - - - -
45. si:dkey-176g4.5 si:dkey-176g4.5 4 1 - - - - 1.000 - - - -
46. C2CD3 ENSDARG00000074137 51 1 - 1.000 - - - - - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
47. ugt5d1 ENSDARG00000002394 5 1 - - - - - - - - 1.000 UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
48. cyp3a65 ENSDARG00000103295 7 1 - 1.000 - - - - - - - cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
49. ftr43 ENSDARG00000076106 2 1 - - - - 1.000 - - - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
50. cacna1aa ENSDARG00000037905 4 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
51. si:ch211-226h8.6 ENSDARG00000077097 1 1 - - - - - - - 1.000 - si:ch211-226h8.6 [Source:ZFIN;Acc:ZDB-GENE-050208-456]
52. prf1.7 1 1 - - - - - - - 1.000 - perforin 1.7
53. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
54. C24H7orf10_1 C24H7orf10_1 0 1 - - - - 1.000 - - - -
55. si:dkey-46g23.3 si:dkey-46g23.3 16 1 - 1.000 - - - - - - -
56. antxr1a ENSDARG00000025672 32 1 - 1.000 - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
57. ftr73 ENSDARG00000095298 1 1 - - - - 1.000 - - - - finTRIM family, member 73 [Source:ZFIN;Acc:ZDB-GENE-090508-13]
58. RNF14 ENSDARG00000043905 41 1 - 1.000 - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
59. CABZ01067175.1 ENSDARG00000100401 0 1 - - - - 1.000 - - - - T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]
60. zgc:171426 ENSDARG00000074764 16 1 - - - - - - - - 1.000 zgc:171426 [Source:ZFIN;Acc:ZDB-GENE-080212-2]
61. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
62. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 1 - 1.000 - - - - - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
63. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -
64. si:ch211-166e11.1 si:ch211-166e11.1 1 1 - - - - - - - - 1.000
65. U4_1 U4_1 2 1 - - - - 1.000 - - - -
66. BX284672.2 BX284672.2 1 1 - - - - - - - 1.000 -
67. Metazoa_SRP_28 Metazoa_SRP_28 0 1 - - - - 1.000 - - - -
68. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 - 1.000 - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
69. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
70. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
71. MFN1 ENSDARG00000011884 1 1 - - - - - - - - 1.000 mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
72. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
73. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
74. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
75. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - 1.000 - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
76. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
77. pofut2 ENSDARG00000045175 6 1 - - - - 1.000 - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
78. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
79. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - 1.000 - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
80. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
81. ms4a17a.2 ENSDARG00000105674 32 1 - - - - 1.000 - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
82. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
83. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
84. WDR49 WDR49 6 1 - - - - - - - 1.000 -
85. CT826375.4 CT826375.4 3 1 - 1.000 - - - - - - -
86. slc12a8 ENSDARG00000074384 12 1 - 1.000 - - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
87. SYDE1 ENSDARG00000077440 4 1 - - - - 1.000 - - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
88. U1_21 U1_21 0 1 - - - - 1.000 - - - -
89. hoxa13b ENSDARG00000036254 404 1 - 1.000 - - - - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
90. DHDH DHDH 15 1 - - - - 1.000 - - - -
91. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
92. wfs1b ENSDARG00000074617 69 1 - 1.000 - - - - - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
93. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
94. socs1a ENSDARG00000038095 20 1 - - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
95. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
96. wnt3a ENSDARG00000058822 5 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
97. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
98. si:dkey-17m8.2 ENSDARG00000035797 40 1 - 1.000 - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
99. CRFA31.2 CRFA31.2 12 1 - - - - - - - 1.000 -
100. cd74b ENSDARG00000036628 8 1 - 1.000 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]

There are 717 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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