Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-253b1.4

Gene Name Gene ID Reads Annotation
si:ch211-253b1.4 si:ch211-253b1.4 261










Genes with expression patterns similar to si:ch211-253b1.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-253b1.4 si:ch211-253b1.4 261 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. PTPLA PTPLA 4044 2.262 0.746 0.775 - - - 0.741 - - -
3. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.649 0.819 0.830 - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
4. hnmt ENSDARG00000012796 302 1.6 0.721 0.879 - - - - - - - histamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040801-157]
5. TMPO TMPO 3264 1.582 0.778 0.804 - - - - - - -
6. rp42-pen rp42-pen 3395 1.571 - 0.816 - - - 0.755 - - -
7. CR388002.1 CR388002.1 1998 1.563 0.746 0.817 - - - - - - -
8. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.559 0.717 0.842 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
9. CR392006.1 CR392006.1 1401 1.553 0.814 0.739 - - - - - - -
10. adra2da ENSDARG00000091277 173 1.536 0.724 0.812 - - - - - - - adrenergic, alpha-2D-, receptor a [Source:ZFIN;Acc:ZDB-GENE-021010-4]
11. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.534 - 0.829 - - - - 0.705 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
12. si:ch211-242b18.1 ENSDARG00000054723 2929 1.533 0.781 0.752 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
13. smyd2b ENSDARG00000005629 8181 1.528 - 0.799 - - - 0.729 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
14. C13H10orf71 3489 1.52 0.734 0.786 - - - - - - - chromosome 13 C10orf71 homolog
15. vcl vcl 6667 1.514 0.739 0.775 - - - - - - -
16. myod1 ENSDARG00000030110 6019 1.512 - 0.751 - - - 0.761 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
17. pygma ENSDARG00000055518 15972 1.512 0.708 0.804 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
18. PBLD_1 PBLD_1 585 1.512 - 0.740 - - - 0.772 - - -
19. GPANK1 ENSDARG00000053995 1535 1.504 0.791 0.713 - - - - - - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
20. mafa ENSDARG00000015890 2140 1.499 0.736 - - - - 0.763 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
21. spon2a ENSDARG00000025465, ENSDARG00000115300 294 1.492 - 0.746 - - - - 0.746 - - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
22. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.491 - 0.720 - - - 0.771 - - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
23. sptb ENSDARG00000030490 7128 1.484 0.744 0.740 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
24. cacnb1 ENSDARG00000002167 1402 1.48 0.714 0.766 - - - - - - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
25. znf648 ENSDARG00000104823 1918 1.479 - 0.778 - - - 0.701 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
26. arpp21 ENSDARG00000061081 892 1.476 0.743 0.733 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
27. mybphb ENSDARG00000003081 5208 1.471 - 0.765 - - - - 0.706 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
28. myoz2a ENSDARG00000012311 1373 1.458 0.714 0.744 - - - - - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
29. FHOD3_1 FHOD3_1 983 1.457 - 0.749 - - - - 0.708 - -
30. loxl3b ENSDARG00000039563 1657 1.45 0.717 0.733 - - - - - - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
31. plod2 ENSDARG00000011821 1656 1.447 - 0.743 - - - - 0.704 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
32. hfe2 4113 1.446 0.723 0.723 - - - - - - - hemochromatosis type 2
33. fam46bb 601 1.443 - 0.715 - - - - 0.728 - - family with sequence similarity 46, member Bb
34. myoz3a ENSDARG00000067701 100 1.439 0.726 0.713 - - - - - - - myozenin 3a [Source:ZFIN;Acc:ZDB-GENE-111012-4]
35. stac3 ENSDARG00000098883 1765 1.423 - 0.722 - - - 0.701 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
36. ube2d4 ENSDARG00000015057 1089 1.418 0.715 0.703 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
37. cacng1 cacng1 3118 1.413 0.701 0.712 - - - - - - -
38. trub1 ENSDARG00000053805 202 0.949 - 0.949 - - - - - - - TruB pseudouridine (psi) synthase family member 1 [Source:ZFIN;Acc:ZDB-GENE-080723-73]
39. ltbp3 325 0.949 - 0.949 - - - - - - - latent transforming growth factor beta binding protein 3, transcript variant X3
40. METTL12 METTL12 415 0.942 - 0.942 - - - - - - -
41. CABZ01044297.1 CABZ01044297.1 2015 0.923 - 0.923 - - - - - - -
42. CABZ01085858.1 CABZ01085858.1 355 0.921 - 0.921 - - - - - - -
43. dnmt5 dnmt5 379 0.919 - 0.919 - - - - - - -
44. col11a2 ENSDARG00000012422 3204 0.915 - 0.915 - - - - - - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
45. ppp1r14c ENSDARG00000077341 1587 0.912 - 0.912 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
46. col9a3 ENSDARG00000037845 6564 0.907 - 0.907 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
47. clu ENSDARG00000010434 498 0.899 - 0.899 - - - - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
48. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.897 - 0.897 - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
49. chrne ENSDARG00000034307, ENSDARG00000112263 1022 0.896 - 0.896 - - - - - - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
50. DUSP10 ENSDARG00000052465 298 0.896 - 0.896 - - - - - - - dual specificity phosphatase 10 [Source:ZFIN;Acc:ZDB-GENE-041014-271]
51. ntla ntla 926 0.893 - 0.893 - - - - - - -
52. eng1b eng1b 2544 0.89 - 0.890 - - - - - - -
53. ggt5a ENSDARG00000052045 293 0.886 - 0.886 - - - - - - - gamma-glutamyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-080226-1]
54. gtf3aa ENSDARG00000030267 217 0.883 - 0.883 - - - - - - - general transcription factor IIIAa [Source:ZFIN;Acc:ZDB-GENE-041006-1]
55. gpr107 ENSDARG00000103200 238 0.879 0.879 - - - - - - - - G protein-coupled receptor 107 [Source:ZFIN;Acc:ZDB-GENE-061103-130]
56. rnd2 ENSDARG00000070735, ENSDARG00000114884 291 0.871 - 0.871 - - - - - - - Rho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
57. myhc4 ENSDARG00000035438 1322 0.871 - 0.871 - - - - - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
58. mybpc2b ENSDARG00000021265 9618 0.869 - 0.869 - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
59. epyc ENSDARG00000056950 7783 0.869 - 0.869 - - - - - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
60. fbp2 ENSDARG00000012366 1042 0.869 - 0.869 - - - - - - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
61. BX322608.1 ENSDARG00000111690 326 0.868 - 0.868 - - - - - - -
62. ahsa1 ahsa1 2012 0.868 0.868 - - - - - - - -
63. matn3b ENSDARG00000069265 856 0.865 - 0.865 - - - - - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
64. pold3 ENSDARG00000076169 694 0.863 - 0.863 - - - - - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
65. lamb2 ENSDARG00000002084 3265 0.858 - 0.858 - - - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
66. pi15a ENSDARG00000045378 2361 0.857 - 0.857 - - - - - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
67. ruvbl1 ENSDARG00000002591 2381 0.857 - 0.857 - - - - - - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
68. CABZ01028287.1 CABZ01028287.1 626 0.856 - 0.856 - - - - - - -
69. kif21a ENSDARG00000061131 913 0.854 - 0.854 - - - - - - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
70. six2b ENSDARG00000054878 567 0.854 0.854 - - - - - - - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
71. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.852 - 0.852 - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
72. lect1 7551 0.851 - 0.851 - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
73. nmt2 ENSDARG00000021808 510 0.851 - 0.851 - - - - - - - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
74. tgm1l1 ENSDARG00000102106 1437 0.851 - 0.851 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
75. col5a3a ENSDARG00000098294 1004 0.849 - - - - - - 0.849 - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
76. BX470254.1 ENSDARG00000097402 1389 0.848 - 0.848 - - - - - - -
77. fgf4 ENSDARG00000105230 407 0.847 0.847 - - - - - - - - fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
78. CU571255.1 CU571255.1 902 0.847 - 0.847 - - - - - - -
79. trmt112 ENSDARG00000071878, ENSDARG00000109878 930 0.843 - 0.843 - - - - - - - tRNA methyltransferase 11-2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-30]
80. mrps33 ENSDARG00000020015 3551 0.842 - - - - - 0.842 - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
81. actn2 actn2 1054 0.841 - 0.841 - - - - - - -
82. PPIP5K1 PPIP5K1 997 0.839 - 0.839 - - - - - - -
83. plcl1 ENSDARG00000067676 2457 0.838 - 0.838 - - - - - - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
84. polr3gla ENSDARG00000012044 148 0.837 - 0.837 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide G like a [Source:ZFIN;Acc:ZDB-GENE-040912-67]
85. BX322787.1 ENSDARG00000105779 381 0.837 - 0.837 - - - - - - -
86. ADRA1B ADRA1B 319 0.837 - 0.837 - - - - - - -
87. opn4b ENSDARG00000053929 143 0.835 0.835 - - - - - - - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
88. ednrb1a ednrb1a 1255 0.835 - 0.835 - - - - - - -
89. ppm1la ENSDARG00000063218 2142 0.834 - 0.834 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
90. ryr3 ENSDARG00000071331 6795 0.834 - 0.834 - - - - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
91. trim55b ENSDARG00000058158 586 0.834 - 0.834 - - - - - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
92. SURF2 ENSDARG00000112476 592 0.833 - 0.833 - - - - - - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
93. ntmt1 ENSDARG00000022399 5779 0.831 - 0.831 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
94. tnnc1b ENSDARG00000037539 13945 0.83 - 0.830 - - - - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
95. mef2cb ENSDARG00000009418 1124 0.83 - 0.830 - - - - - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
96. ehbp1l1b ENSDARG00000079895 559 0.829 - 0.829 - - - - - - - EH domain binding protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-238]
97. PAQR4 PAQR4 2150 0.829 - 0.829 - - - - - - -
98. CR450814.3 CR450814.3 608 0.828 - 0.828 - - - - - - -
99. ybey_1 ENSDARG00000011999, ENSDARG00000110510 75 0.828 - 0.828 - - - - - - - ybeY metalloendoribonuclease [Source:ZFIN;Acc:ZDB-GENE-030131-437]
100. ryr1b ENSDARG00000023797 5693 0.828 - 0.828 - - - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]

There are 507 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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