Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-250g4.3

Gene Name Gene ID Reads Annotation
si:ch211-250g4.3 ENSDARG00000092945 150 si:ch211-250g4.3 [Source:ZFIN;Acc:ZDB-GENE-060503-506]










Genes with expression patterns similar to si:ch211-250g4.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-250g4.3 ENSDARG00000092945 150 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 si:ch211-250g4.3 [Source:ZFIN;Acc:ZDB-GENE-060503-506]
2. CABZ01086041.1 ENSDARG00000019442 472 1.679 - 0.840 - - - - - 0.839 - angiomotin like 1 [Source:NCBI gene;Acc:101884950]
3. grin2ab ENSDARG00000070543 31 1.678 - - 0.852 - - 0.826 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
4. commd9 ENSDARG00000094258, ENSDARG00000111031 49 1.675 - 0.824 - - 0.851 - - - - COMM domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070424-139]
5. calhm2 ENSDARG00000039482 138 1.656 - 0.744 - - 0.912 - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
6. CR388013.3 CR388013.3 45 1.652 - - - - 0.910 0.742 - - -
7. CCDC141 ENSDARG00000095675 94 1.611 - 0.774 - - - - - 0.837 - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
8. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1.608 - 0.719 - - - - - 0.889 - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
9. gata1a ENSDARG00000013477, ENSDARG00000117116 902 1.606 - 0.854 - - - - - - 0.752 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
10. olfcg2 ENSDARG00000101083 8 1.578 - - 0.852 - - 0.726 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
11. MVD MVD 32 1.569 - 0.735 - - - - - 0.834 -
12. CR387997.1 CR387997.1 190 1.569 - 0.756 - - 0.813 - - - -
13. BX004880.2 BX004880.2 83 1.565 - - - - - 0.726 - 0.839 -
14. kcmf1 ENSDARG00000067656 742 1.563 - 0.811 - - - - - 0.752 - potassium channel modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1383]
15. GPR153 ENSDARG00000087601 48 1.541 - - - - - 0.709 - 0.832 - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
16. opn4b ENSDARG00000053929 143 1.518 - 0.768 - - - 0.750 - - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
17. si:ch211-117i10.10 si:ch211-117i10.10 18 1.493 - 0.744 0.749 - - - - - -
18. si:dkey-26g8.5 ENSDARG00000089750 7070 1.487 - 0.744 - 0.743 - - - - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
19. dok1a ENSDARG00000078108 9 1.47 - 0.744 - - - 0.726 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
20. NINJ1 ENSDARG00000103663 43 1.47 - 0.744 - - - 0.726 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
21. CR354382.1 CR354382.1 42 1.467 - 0.744 0.723 - - - - - -
22. thbs4a ENSDARG00000102777 625 1.462 - - - - 0.736 0.726 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
23. NAT14 ENSDARG00000115349 21 1.457 - 0.731 - - - 0.726 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
24. dnah5 ENSDARG00000087373 168 1.457 - - - - 0.748 - - 0.709 - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
25. PIGG PIGG 106 1.439 - 0.730 - - 0.709 - - - -
26. si:ch211-160d14.9 8 0.994 - - - - 0.994 - - - - si:ch211-160d14.9, transcript variant X1
27. ZBED1_3 ZBED1_3 7 0.993 - - - - 0.993 - - - -
28. cdx1a ENSDARG00000114554 28 0.993 - - - - 0.993 - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
29. PGS1 ENSDARG00000075857 5 0.993 - - - - 0.993 - - - - phosphatidylglycerophosphate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-170216-1]
30. AL935186.1 ENSDARG00000025046 6 0.993 - - - - 0.993 - - - -
31. CEACAM7 CEACAM7 46 0.992 - - - - 0.992 - - - -
32. si:rp71-36n21.1 93 0.99 - - - - 0.990 - - - - si:rp71-36n21.1
33. ttc22 ENSDARG00000077836 21 0.99 - - - - 0.990 - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
34. CABZ01081748.1 ENSDARG00000102139 31 0.99 - - - - 0.990 - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
35. BX465841.1 BX465841.1 47 0.988 - - - - 0.988 - - - -
36. il13 ENSDARG00000077809 8 0.985 - - - - 0.985 - - - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
37. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 0.979 - - - - 0.979 - - - -
38. AC024175.21 AC024175.21 10 0.978 - - - - 0.978 - - - -
39. CCDC89 CCDC89 40 0.977 - - - - 0.977 - - - -
40. insig2 ENSDARG00000113367 27 0.976 - - - - 0.976 - - - - insulin induced gene 2 [Source:ZFIN;Acc:ZDB-GENE-040202-1]
41. CU467646.3 ENSDARG00000099076 36 0.968 - - - - 0.968 - - - - mucin-2-like [Source:NCBI gene;Acc:108179180]
42. tnfaip8l2a ENSDARG00000075592 90 0.968 - - - - 0.968 - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
43. her11 ENSDARG00000002707 29 0.967 - - - - 0.967 - - - - hairy-related 11 [Source:ZFIN;Acc:ZDB-GENE-040824-4]
44. CABZ01074899.1 CABZ01074899.1 89 0.965 - - - - 0.965 - - - -
45. C25H12orf29 C25H12orf29 31 0.956 - - - - 0.956 - - - -
46. DUSP18 DUSP18 117 0.948 - - - - 0.948 - - - -
47. fasn ENSDARG00000087657 99 0.943 - - - - 0.943 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
48. si:dkey-167i21.2 ENSDARG00000093886 10 0.943 - - - - 0.943 - - - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
49. dnah12 ENSDARG00000059987 110 0.942 - - - - 0.942 - - - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
50. si:ch211-216b21.2 ENSDARG00000060253 54 0.938 - - - - 0.938 - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
51. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 0.932 - - 0.932 - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
52. tsga10 ENSDARG00000052512 79 0.929 - - - - 0.929 - - - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
53. vap ENSDARG00000093053, ENSDARG00000100949 6 0.926 - - 0.926 - - - - - - vascular associated protein [Source:ZFIN;Acc:ZDB-GENE-090313-42]
54. ano2 ENSDARG00000101363 50 0.925 - - - - 0.925 - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
55. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.925 - 0.925 - - - - - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
56. si:ch211-207c6.5 si:ch211-207c6.5 72 0.925 - - - - - 0.925 - - -
57. C20H1orf198 C20H1orf198 246 0.925 - - - - - 0.925 - - -
58. pde5ab ENSDARG00000051915 18 0.921 - - - - 0.921 - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
59. ADCYAP1R1 ADCYAP1R1 118 0.919 - - - - 0.919 - - - -
60. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 0.918 - - - - 0.918 - - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
61. ankk1 ENSDARG00000056921 119 0.916 - - - - 0.916 - - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
62. msi2a ENSDARG00000033901, ENSDARG00000114442 256 0.915 - - - - - 0.915 - - - musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]
63. RASGRF2 RASGRF2 644 0.914 - 0.914 - - - - - - -
64. si:dkey-10o6.2 ENSDARG00000074628 22 0.906 - - 0.906 - - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
65. myt1la ENSDARG00000008209 120 0.903 - - - - 0.903 - - - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
66. CU694315.1 CU694315.1 87 0.902 - 0.902 - - - - - - -
67. chic1 ENSDARG00000053166 210 0.902 - 0.902 - - - - - - - cysteine-rich hydrophobic domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7763]
68. si:dkey-15j16.6 ENSDARG00000042698 138 0.894 - - - - - 0.894 - - - si:dkey-15j16.6 [Source:ZFIN;Acc:ZDB-GENE-130531-45]
69. BX927290.1 BX927290.1 389 0.894 - - - - - 0.894 - - -
70. tlcd1 ENSDARG00000002391 90 0.893 - - - - 0.893 - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
71. PLEKHM3 ENSDARG00000030633 496 0.893 - 0.893 - - - - - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
72. HAUS2 HAUS2 392 0.893 - 0.893 - - - - - - -
73. ZBTB40 ENSDARG00000091762 57 0.891 - - - - - 0.891 - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
74. si:dkey-15h8.12 si:dkey-15h8.12 206 0.888 - - - - 0.888 - - - -
75. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.886 - - - - 0.886 - - - - adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
76. igfbp6b ENSDARG00000090833 37 0.886 - 0.886 - - - - - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
77. adat1 ENSDARG00000061348 62 0.886 - 0.886 - - - - - - - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
78. nmnat1 ENSDARG00000105748 102 0.886 - 0.886 - - - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
79. atg10 ENSDARG00000104846 85 0.885 - - - - 0.885 - - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
80. nsun3 ENSDARG00000013023 136 0.884 - - - - - 0.884 - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
81. coro2ba ENSDARG00000079440 420 0.883 - - - - 0.883 - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
82. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 0.883 - - - - 0.883 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
83. nek8 ENSDARG00000045626, ENSDARG00000117017 67 0.88 - - - - 0.880 - - - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
84. CU302436.1_1 ENSDARG00000114500 18 0.88 - - - - - 0.880 - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
85. prr15la ENSDARG00000025615 77 0.88 - - - - - 0.880 - - - proline rich 15-like a [Source:ZFIN;Acc:ZDB-GENE-040801-218]
86. v2rh14 ENSDARG00000068520, ENSDARG00000116571 3 0.88 - - - - - 0.880 - - - vomeronasal 2 receptor, h14 [Source:ZFIN;Acc:ZDB-GENE-050419-221]
87. C14orf80 C14orf80 20 0.877 - - 0.877 - - - - - -
88. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 0.876 - - - - - 0.876 - - -
89. C17H15orf52 244 0.872 - - - - 0.872 - - - - chromosome 17 C15orf52 homolog, transcript variant X3
90. CU467824.1 CU467824.1 76 0.872 - - - - 0.872 - - - -
91. AL929322.1 AL929322.1 300 0.872 - 0.872 - - - - - - -
92. zhx2 zhx2 365 0.872 - - - - 0.872 - - - -
93. acap1 ENSDARG00000056346, ENSDARG00000109603 274 0.872 - - - - 0.872 - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
94. si:dkey-1b17.11 si:dkey-1b17.11 3 0.869 - - 0.869 - - - - - -
95. NEK3 ENSDARG00000058869 55 0.869 - - - - 0.869 - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
96. med30 ENSDARG00000101115 133 0.868 - - - - 0.868 - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
97. GPR4 ENSDARG00000079479 92 0.867 - - - - - 0.867 - - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
98. CR318595.2 CR318595.2 17 0.863 - 0.863 - - - - - - -
99. CDR2_1 CDR2_1 8 0.863 - 0.863 - - - - - - -
100. si:ch211-196f5.9 ENSDARG00000096451 70 0.863 - 0.863 - - - - - - - si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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