Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-250c4.5

Gene Name Gene ID Reads Annotation
si:ch211-250c4.5 ENSDARG00000075943 10 si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]










Genes with expression patterns similar to si:ch211-250c4.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-250c4.5 ENSDARG00000075943 10 5 - - 1.000 1.000 1.000 - 1.000 - 1.000 si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
2. edar ENSDARG00000099088 1 2 - - 1.000 - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
3. nkx1.2la ENSDARG00000006350 76 1.979 - - - - 0.979 - 1.000 - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
4. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.931 - - 1.000 - 0.931 - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
5. CU633740.1 CU633740.1 8 1.875 - - - - - - 1.000 - 0.875
6. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.818 - - - - 0.892 - 0.926 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
7. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.779 - - 1.000 - - - 0.779 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
8. NAV1 NAV1 23 1.704 - - - 0.736 0.968 - - - -
9. fbxw10 ENSDARG00000086484 11 1.699 - - 0.702 - 0.997 - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
10. RIBC2 ENSDARG00000075177 445 1.614 - - - - 0.726 - 0.888 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
11. pard3 pard3 161 1.571 - - - - 0.758 - 0.813 - -
12. si:dkey-247i3.4 si:dkey-247i3.4 89 1.56 - - - - 0.762 - 0.798 - -
13. si:dkey-29j8.5 si:dkey-29j8.5 9 1.55 - - 0.771 - - - 0.779 - -
14. BX005294.2 ENSDARG00000109361 3 1 - - - - - - 1.000 - -
15. mki67ip mki67ip 0 1 - - 1.000 - - - - - -
16. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
17. CU693369.1 CU693369.1 2 1 - - - - - - 1.000 - -
18. MEX3D MEX3D 293 1 - - - - - - 1.000 - -
19. si:ch211-57m13.9 ENSDARG00000095884 10 1 - - - - - - 1.000 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
20. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
21. PRPF6 ENSDARG00000091367 48 1 - - - - - - 1.000 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
22. prl ENSDARG00000037946 80 1 - - - - - - 1.000 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
23. cart4 ENSDARG00000070142 55 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
24. SNORD14 SNORD14 31 1 - - - - - - 1.000 - -
25. SH3RF3 ENSDARG00000102334 1 1 - - 1.000 - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
26. BEGAIN BEGAIN 39 1 - - - - - - 1.000 - -
27. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
28. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
29. CABZ01041860.1 CABZ01041860.1 4 1 - - - - 1.000 - - - -
30. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
31. si:dkey-235h8.1 si:dkey-235h8.1 2457 1 - - - - - - 1.000 - -
32. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
33. si:ch211-14g4.4 si:ch211-14g4.4 6 1 - - - - 1.000 - - - -
34. marco ENSDARG00000059294 17 1 - - 1.000 - - - - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
35. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
36. CABZ01064671.1 ENSDARG00000039935 21 1 - - - - - - 1.000 - -
37. ZP2_1 ZP2_1 7 1 - - - - - - 1.000 - -
38. zeb1a ENSDARG00000016788 48 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
39. zgc:173711 zgc:173711 2 1 - - 1.000 - - - - - -
40. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
41. si:ch211-223a21.3 ENSDARG00000104737 28 1 - - - - - - 1.000 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
42. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
43. zgc:174224 ENSDARG00000093875 4 1 - - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
44. fgf10b ENSDARG00000100475 17 1 - - 1.000 - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
45. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
46. zdhhc18a ENSDARG00000069807 8 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
47. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
48. ptf1a ENSDARG00000014479 349 1 - - - - - - 1.000 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
49. fabp7b ENSDARG00000034650 397 1 - - - - - - 1.000 - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
50. GSTK1 ENSDARG00000056510 14 1 - - 1.000 - - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
51. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - - - 1.000 - -
52. ftr43 ENSDARG00000076106 2 1 - - - - - - 1.000 - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
53. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
54. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
55. nfatc1 ENSDARG00000036168 16 1 - - - - - - 1.000 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
56. si:dkey-239j18.3 ENSDARG00000089806 12918 1 - - - - - - 1.000 - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
57. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
58. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
59. sez6l ENSDARG00000100594 35 1 - - - - - - 1.000 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
60. U6_13 U6_13 0 1 - - 1.000 - - - - - -
61. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
62. ENDOD1 ENDOD1 1 1 - - - - - - 1.000 - -
63. BX649417.1 ENSDARG00000117387 1 1 - - 1.000 - - - - - -
64. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1 - - 1.000 - - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
65. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
66. BX323876.2 ENSDARG00000104577 62 1 - - - - - - 1.000 - -
67. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - - 1.000 - -
68. CABZ01116714.1 CABZ01116714.1 4 1 - - 1.000 - - - - - -
69. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
70. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
71. mfsd2b ENSDARG00000030263 12 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
72. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - - - 1.000 - -
73. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
74. C6H22orf23 C6H22orf23 15 1 - - - - - - 1.000 - -
75. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
76. CU459094.1 ENSDARG00000110517 17 1 - - - - - - 1.000 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
77. gaa ENSDARG00000090714 19 1 - - - - - - 1.000 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
78. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
79. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
80. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
81. fto ENSDARG00000044216 33 1 - - - - 1.000 - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
82. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
83. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
84. ZNF70 ZNF70 2 1 - - - - - - 1.000 - -
85. si:ch211-71k14.1 ENSDARG00000087061 48 1 - - - - - - 1.000 - - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
86. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - 1.000 - - - - - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
87. si:ch211-113a14.26_2 0 1 - - - - - - 1.000 - - si:ch211-113a14.26
88. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - 1.000 - -
89. CU481774.2 CU481774.2 1 1 - - - - - - 1.000 - -
90. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
91. HCN2 HCN2 0 1 - - 1.000 - - - - - -
92. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
93. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
94. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
95. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
96. cyp3c4 ENSDARG00000070021 95 1 - - - - - - 1.000 - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
97. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
98. chia.4 ENSDARG00000008541 14 1 - - - - - - 1.000 - - chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
99. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
100. trim3a ENSDARG00000063711 44 1 - - - - - - 1.000 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]

There are 740 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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