Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-250c4.5

Gene Name Gene ID Reads Annotation
si:ch211-250c4.5 ENSDARG00000075943 10 si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]










Genes with expression patterns similar to si:ch211-250c4.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-250c4.5 ENSDARG00000075943 10 5 - - 1.000 1.000 1.000 - 1.000 - 1.000 si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
2. edar ENSDARG00000099088 1 2 - - 1.000 - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
3. nkx1.2la ENSDARG00000006350 76 1.979 - - - - 0.979 - 1.000 - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
4. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.931 - - 1.000 - 0.931 - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
5. CU633740.1 CU633740.1 8 1.875 - - - - - - 1.000 - 0.875
6. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.818 - - - - 0.892 - 0.926 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
7. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.779 - - 1.000 - - - 0.779 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
8. NAV1 NAV1 23 1.704 - - - 0.736 0.968 - - - -
9. fbxw10 ENSDARG00000086484 11 1.699 - - 0.702 - 0.997 - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
10. RIBC2 ENSDARG00000075177 445 1.614 - - - - 0.726 - 0.888 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
11. pard3 pard3 161 1.571 - - - - 0.758 - 0.813 - -
12. si:dkey-247i3.4 si:dkey-247i3.4 89 1.56 - - - - 0.762 - 0.798 - -
13. si:dkey-29j8.5 si:dkey-29j8.5 9 1.55 - - 0.771 - - - 0.779 - -
14. npas4a ENSDARG00000055752 5 1 - - - - - - 1.000 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
15. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
16. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
17. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
18. ZNF512B ENSDARG00000071055 7 1 - - - - - - 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
19. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
20. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
21. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
22. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
23. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
24. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
25. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - - - 1.000 - -
26. slc25a3a ENSDARG00000027424 11 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
27. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
28. xrra1 ENSDARG00000089578 18 1 - - - - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
29. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
30. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
31. ZNF70 ZNF70 2 1 - - - - - - 1.000 - -
32. il1b ENSDARG00000098700 27 1 - - - - 1.000 - - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
33. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
34. gaa ENSDARG00000090714 19 1 - - - - - - 1.000 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
35. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
36. CU468142.1 CU468142.1 6 1 - - - - - - 1.000 - -
37. kif20a ENSDARG00000044491 12 1 - - - - - - 1.000 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
38. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
39. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
40. tbc1d22b ENSDARG00000026988 18 1 - - - - - - 1.000 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
41. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
42. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - 1.000 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
43. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
44. MAP3K2 ENSDARG00000062884 34 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
45. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
46. ZP2_1 ZP2_1 7 1 - - - - - - 1.000 - -
47. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
48. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
49. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - - 1.000 - -
50. CU693369.1 CU693369.1 2 1 - - - - - - 1.000 - -
51. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
52. DBNDD1 DBNDD1 43 1 - - - - - - 1.000 - -
53. WDR63 ENSDARG00000105093 13 1 - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
54. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
55. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
56. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
57. lrrc48 lrrc48 50 1 - - - - - - 1.000 - -
58. EIF4G3 EIF4G3 24 1 - - - - - - 1.000 - -
59. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
60. CABZ01064671.1 ENSDARG00000039935 21 1 - - - - - - 1.000 - -
61. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
62. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
63. zgc:195633_1 142 1 - - - - - - 1.000 - - zgc:195633
64. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
65. U6_13 U6_13 0 1 - - 1.000 - - - - - -
66. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
67. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
68. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
69. atoh7 ENSDARG00000069552 254 1 - - - - - - 1.000 - - atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
70. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
71. ZC2HC1C ENSDARG00000070526 14 1 - - - - 1.000 - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
72. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
73. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1 - - - - - - 1.000 - -
74. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
75. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - - - - - - 1.000 - -
76. fto ENSDARG00000044216 33 1 - - - - 1.000 - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
77. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
78. SYNPR ENSDARG00000037587 20 1 - - - - - - 1.000 - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
79. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
80. zeb1a ENSDARG00000016788 48 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
81. irak1 ENSDARG00000025949 19 1 - - - - - - 1.000 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
82. CR391924.1 CR391924.1 5 1 - - - - 1.000 - - - -
83. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
84. pip5k1cb ENSDARG00000100313 3 1 - - 1.000 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
85. pcyox1 ENSDARG00000103052 20 1 - - - - - - 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
86. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
87. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
88. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
89. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
90. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
91. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
92. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
93. BX323876.2 ENSDARG00000104577 62 1 - - - - - - 1.000 - -
94. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
95. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
96. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
97. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
98. dnajb1b ENSDARG00000041394 25 1 - - - - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
99. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
100. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]

There are 740 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA