Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-250c4.3

Gene Name Gene ID Reads Annotation
si:ch211-250c4.3 si:ch211-250c4.3 677










Genes with expression patterns similar to si:ch211-250c4.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-250c4.3 si:ch211-250c4.3 677 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 2.44 - 0.721 0.995 - - - 0.724 - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
3. dnajc3 dnajc3 802 1.882 - - 0.993 - - - 0.889 - -
4. pvrl2l ENSDARG00000063390 1112 1.787 - 0.801 0.986 - - - - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
5. bcl2l10 ENSDARG00000026766 1426 1.779 - - 0.983 - - - 0.796 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
6. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.777 - - 0.967 - - - 0.810 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
7. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.776 - - 0.988 - - 0.788 - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
8. AIFM2 ENSDARG00000077549 1419 1.77 - - 0.984 - - - 0.786 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
9. chmp3 ENSDARG00000038064 577 1.749 - - - - - 0.821 0.928 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
10. TMEM87A TMEM87A 2407 1.749 - - 0.977 - - - 0.772 - -
11. CABZ01103862.1 ENSDARG00000109235 3223 1.727 - - 0.962 - - - 0.765 - -
12. stk38a ENSDARG00000019973 1343 1.694 - - 0.988 - - - 0.706 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
13. clic1 ENSDARG00000103340 2235 1.689 - - 0.988 - - - 0.701 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
14. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 1.677 0.764 - 0.913 - - - - - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
15. zgc:92360 ENSDARG00000038151 2161 1.677 - 0.725 0.952 - - - - - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
16. kctd12.2 ENSDARG00000053542, ENSDARG00000113200 2951 1.665 - - 0.904 - - - 0.761 - - potassium channel tetramerisation domain containing 12.2 [Source:ZFIN;Acc:ZDB-GENE-060117-4]
17. si:dkey-193c22.2 ENSDARG00000076735 2791 1.657 - - - - - 0.841 0.816 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
18. vcanb ENSDARG00000009401 3611 1.643 - - - - - 0.864 0.779 - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
19. ecm2 ENSDARG00000071549 1527 1.629 - 0.720 0.909 - - - - - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
20. srpx2 ENSDARG00000034559 452 1.627 - 0.752 - - - - 0.875 - - sushi-repeat containing protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-110411-231]
21. prkchb ENSDARG00000043243 126 1.623 - 0.770 - - - - 0.853 - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
22. tmem8a ENSDARG00000032795 677 1.616 - - - - - 0.778 0.838 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
23. HEATR6 ENSDARG00000073686 241 1.609 - - - - - 0.774 0.835 - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
24. pnkd ENSDARG00000071032 447 1.604 - - - - - 0.724 0.880 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
25. adck1 ENSDARG00000062561 22 1.591 - - - - - 0.732 0.859 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
26. AIM1L AIM1L 899 1.577 0.753 - - - - - 0.824 - -
27. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.572 - - - - - 0.735 0.837 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
28. chl1a ENSDARG00000077881 1488 1.571 - - - - - 0.784 0.787 - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
29. uros ENSDARG00000027491 1147 1.557 - - - - - 0.773 0.784 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
30. BX927351.1 ENSDARG00000096844 125 1.545 0.772 - - - - - 0.773 - -
31. TEX264 TEX264 283 1.543 - 0.778 - - - 0.765 - - -
32. atpif1b 8625 1.542 0.791 - 0.751 - - - - - - ATPase inhibitory factor 1b
33. rab25a ENSDARG00000058800 451 1.535 - - - - - 0.832 0.703 - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
34. he2 945 1.531 - - - - - 0.745 0.786 - - hatching enzyme 2
35. RUNDC1 ENSDARG00000091962 693 1.53 - - - - - 0.790 0.740 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
36. tmem110 497 1.529 0.741 - - - - - 0.788 - - transmembrane protein 110
37. smcr8a ENSDARG00000052818 559 1.525 - - - - - 0.740 0.785 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
38. ncbp2 ENSDARG00000014898 232 1.512 0.705 - - - - - 0.807 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
39. tapbp tapbp 70 1.51 - - - - - 0.733 0.777 - -
40. LRG1 LRG1 304 1.496 0.742 - - - - - 0.754 - -
41. itih5 ENSDARG00000045517 374 1.495 - - - - - 0.769 0.726 - - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
42. mcf2la ENSDARG00000075859 882 1.492 - - - - - 0.791 0.701 - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
43. NANS NANS 270 1.488 - 0.756 - - - - 0.732 - -
44. gltpd1 gltpd1 377 1.482 - - - - - 0.715 0.767 - -
45. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.481 - - - - - 0.779 0.702 - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
46. CR388068.1 CR388068.1 481 1.475 - - - - - 0.710 0.765 - -
47. rabl3 ENSDARG00000040959 271 1.473 - 0.751 - - - - 0.722 - - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
48. EMILIN2 EMILIN2 429 1.468 - 0.748 - - - - 0.720 - -
49. WIPF2 WIPF2 3171 1.463 0.735 - - - - 0.728 - - -
50. fam60al_1 949 1.462 - - - - - 0.758 0.704 - - family with sequence similarity 60, member A, like
51. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.453 - 0.735 - - - - 0.718 - - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
52. hey1 ENSDARG00000070538 986 1.442 - - - - - 0.739 0.703 - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
53. parp6a ENSDARG00000042703 112 1.439 - 0.727 - - - 0.712 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
54. npdc1 npdc1 221 0.996 - - 0.996 - - - - - -
55. si:dkey-54g2.6 si:dkey-54g2.6 252 0.996 - - 0.996 - - - - - -
56. ralba ENSDARG00000040778 1574 0.995 - - 0.995 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
57. CR382281.1 ENSDARG00000100098 135 0.995 - - 0.995 - - - - - -
58. c1ql3a ENSDARG00000010350 179 0.995 - - 0.995 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
59. sptlc3 ENSDARG00000030743 596 0.995 - - 0.995 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
60. si:dkey-220k22.3 ENSDARG00000094693 166 0.995 - - 0.995 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
61. wnt10a ENSDARG00000017155 491 0.995 - - 0.995 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
62. ZNHIT6 ENSDARG00000095817 355 0.995 - - 0.995 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
63. si:ch211-173m16.2 ENSDARG00000093284 186 0.995 - - 0.995 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
64. ndufa4l2 153 0.995 - - 0.995 - - - - - - NDUFA4, mitochondrial complex associated like 2
65. CR855996.2 ENSDARG00000104450 310 0.995 - - 0.995 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
66. mxra8b ENSDARG00000062129 1004 0.994 - - 0.994 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
67. tbc1d10a tbc1d10a 462 0.994 - - 0.994 - - - - - -
68. prdm1a ENSDARG00000002445 1340 0.994 - - 0.994 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
69. smpd1 ENSDARG00000076121 584 0.994 - - 0.994 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
70. tmco4 ENSDARG00000078924 330 0.993 - - 0.993 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
71. itsn1 ENSDARG00000000086 684 0.993 - - 0.993 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
72. PTDSS2 ENSDARG00000101018 881 0.993 - - 0.993 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
73. CABZ01008011.1 CABZ01008011.1 761 0.993 - - 0.993 - - - - - -
74. edc3 ENSDARG00000051931 780 0.993 - - 0.993 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
75. slc2a10 ENSDARG00000090820 637 0.993 - - 0.993 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
76. gnb1a ENSDARG00000090454 481 0.993 - - 0.993 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
77. hipk3b ENSDARG00000062082 1248 0.993 - - 0.993 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
78. ppp1r14c ENSDARG00000077341 1587 0.993 - - 0.993 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
79. si:dkey-92i15.4 ENSDARG00000078387 428 0.992 - - 0.992 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
80. mbtps2 ENSDARG00000057577 1285 0.992 - - 0.992 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
81. hint3 ENSDARG00000074286 1015 0.992 - - 0.992 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
82. galnt1 ENSDARG00000061335 1648 0.991 - - 0.991 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
83. ehd1a ENSDARG00000098853 1092 0.99 - - 0.990 - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
84. twist3 ENSDARG00000019646 1221 0.989 - - 0.989 - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
85. GIT1 ENSDARG00000039489 1157 0.989 - - 0.989 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
86. mark2a ENSDARG00000079905 1765 0.989 - - 0.989 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
87. tbc1d12a ENSDARG00000038237 698 0.989 - - 0.989 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
88. ercc5 ENSDARG00000023678 468 0.989 - - 0.989 - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
89. MAP4_1 MAP4_1 1153 0.988 - - 0.988 - - - - - -
90. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.988 - - 0.988 - - - - - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
91. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.988 - - 0.988 - - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
92. BX571715.2 BX571715.2 1316 0.988 - - 0.988 - - - - - -
93. sema3fb ENSDARG00000055373 834 0.988 - - 0.988 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
94. hdac4 ENSDARG00000098349 1370 0.987 - - 0.987 - - - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
95. il17rd ENSDARG00000098359 1153 0.987 - - 0.987 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
96. prpf4ba ENSDARG00000008784 936 0.987 - - 0.987 - - - - - - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
97. tmbim1 tmbim1 1005 0.986 - - 0.986 - - - - - -
98. tiprl ENSDARG00000032353 1045 0.986 - - 0.986 - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
99. zgc:56585 ENSDARG00000026236 704 0.986 - - 0.986 - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
100. TIFA TIFA 1519 0.986 - - 0.986 - - - - - -

There are 1294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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