Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-249c2.1

Gene Name Gene ID Reads Annotation
si:ch211-249c2.1 ENSDARG00000102941 49 si:ch211-249c2.1 [Source:ZFIN;Acc:ZDB-GENE-060503-317]










Genes with expression patterns similar to si:ch211-249c2.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-249c2.1 ENSDARG00000102941 49 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-249c2.1 [Source:ZFIN;Acc:ZDB-GENE-060503-317]
2. tmprss15 ENSDARG00000079393 25 2.401 - 0.885 - - - - 0.704 - 0.812 transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
3. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1.777 - 1.000 - - - 0.777 - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
4. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.766 0.881 0.885 - - - - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
5. ccdc37 ccdc37 36 1.755 0.881 - - - 0.874 - - - -
6. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1.751 0.881 - 0.870 - - - - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
7. CR391995.1 ENSDARG00000098041 48 1.709 0.881 - - - - - 0.828 - -
8. fam46a fam46a 92 1.671 - 0.928 - - - 0.743 - - -
9. GBF1 ENSDARG00000027016 30 1.662 - 0.885 - - - 0.777 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
10. AL844186.1 ENSDARG00000114351 41 1.659 0.774 0.885 - - - - - - -
11. hrh3 ENSDARG00000035942 32 1.658 0.881 - - - - 0.777 - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
12. trim35-29 ENSDARG00000055730 24 1.658 0.881 - - - - 0.777 - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
13. GFRAL ENSDARG00000089709 167 1.656 0.837 - - - - - 0.819 - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
14. AAK1 AAK1 3 1.623 - 0.792 - - - - - - 0.831
15. gda ENSDARG00000002986 9 1.606 - 0.885 - - - - - 0.721 - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
16. U8 U8 11 1.602 0.881 - - - - - - 0.721 -
17. C7H15orf43 C7H15orf43 10 1.592 - 0.885 - - - - - 0.707 -
18. BX323793.1 ENSDARG00000104134 24 1.588 0.881 0.707 - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
19. st8sia7.1 ENSDARG00000054211 34 1.587 - 0.885 - - 0.702 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
20. TRIM14_7 TRIM14_7 381 1.54 - - 0.764 - - - 0.776 - -
21. fktn ENSDARG00000059437, ENSDARG00000109351 340 1.523 0.795 0.728 - - - - - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
22. trim23 ENSDARG00000069420 103 1.513 - 0.784 - - - 0.729 - - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
23. GRB7 ENSDARG00000042726 100 1.513 - - 0.770 - - - 0.743 - - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
24. sepn1 801 1.502 - - - - 0.771 0.731 - - - selenoprotein N, 1
25. pdik1l ENSDARG00000056509 548 1.472 - - - - - 0.725 0.747 - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
26. si:dkey-98p3.7 si:dkey-98p3.7 147 1.443 - - 0.719 - - 0.724 - - -
27. sema4ab ENSDARG00000062352 409 1.441 - - 0.716 - - 0.725 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
28. zgc:100951 ENSDARG00000111442 24 1 - 1.000 - - - - - - - zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
29. TMEM182 TMEM182 78 1 - 1.000 - - - - - - -
30. ACTN2 ACTN2 343 1 1.000 - - - - - - - -
31. BX323050.1 BX323050.1 116 1 - 1.000 - - - - - - -
32. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 - 1.000 - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
33. si:dkey-66g10.2 ENSDARG00000092845 28 1 - 1.000 - - - - - - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
34. cdh13 ENSDARG00000014215 106 1 - 1.000 - - - - - - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
35. zgc:171452 ENSDARG00000074069 6 1 - 1.000 - - - - - - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
36. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 - 1.000 - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
37. CTXN1 ENSDARG00000098284, ENSDARG00000113270 2 1 - 1.000 - - - - - - - cortexin 1 [Source:NCBI gene;Acc:101885932]
38. rab11bb ENSDARG00000090086 43 1 - 1.000 - - - - - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
39. rab25a ENSDARG00000058800 451 1 - 1.000 - - - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
40. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - 1.000 - - - - - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
41. TMEM216 ENSDARG00000091576 357 1 - 1.000 - - - - - - - transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]
42. fubp3 ENSDARG00000086896 21 1 - 1.000 - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
43. GPR153 ENSDARG00000087601 48 1 - 1.000 - - - - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
44. C25HXorf38_1 C25HXorf38_1 35 0.974 - 0.974 - - - - - - -
45. si:dkey-196j8.2 ENSDARG00000093874 55 0.974 - 0.974 - - - - - - - si:dkey-196j8.2 [Source:ZFIN;Acc:ZDB-GENE-081107-58]
46. ankef1a ENSDARG00000019135 23 0.972 - - 0.972 - - - - - - ankyrin repeat and EF-hand domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041001-196]
47. klhl26 ENSDARG00000053876 48 0.961 - - 0.961 - - - - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
48. wnt5a ENSDARG00000104973 21 0.953 - - - - 0.953 - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
49. TMEM116 TMEM116 96 0.944 - 0.944 - - - - - - -
50. si:ch211-113a14.26_4 31 0.944 0.944 - - - - - - - - si:ch211-113a14.26
51. zgc:171459 ENSDARG00000077248 224 0.944 0.944 - - - - - - - - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
52. parp12a ENSDARG00000042496 82 0.944 - 0.944 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
53. ovca2 ENSDARG00000103748 38 0.944 - 0.944 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
54. si:ch211-76l23.6 si:ch211-76l23.6 68 0.944 - 0.944 - - - - - - -
55. slc7a2 ENSDARG00000037097, ENSDARG00000109424 122 0.944 0.944 - - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-5]
56. TMEM151A ENSDARG00000077986 78 0.944 - - 0.944 - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
57. rtn4r ENSDARG00000090035 46 0.944 - 0.944 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
58. BX465851.1 BX465851.1 237 0.938 - 0.938 - - - - - - -
59. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 0.93 - 0.930 - - - - - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
60. si:dkey-54g2.6 si:dkey-54g2.6 252 0.928 - - - - - - 0.928 - -
61. si:dkey-240e12.6 ENSDARG00000110137 674 0.921 - - - - - - - - 0.921 si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
62. desi1a ENSDARG00000033140 92 0.919 - 0.919 - - - - - - - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
63. btbd3a ENSDARG00000005544 595 0.917 - 0.917 - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
64. tcerg1a ENSDARG00000098822 204 0.917 0.917 - - - - - - - - transcription elongation regulator 1a (CA150) [Source:ZFIN;Acc:ZDB-GENE-030131-1791]
65. eda ENSDARG00000074591, ENSDARG00000113529 263 0.914 0.914 - - - - - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
66. PIGG PIGG 106 0.911 - 0.911 - - - - - - -
67. pax7a ENSDARG00000100398, ENSDARG00000111233 37 0.91 - - - - - 0.910 - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
68. pcnxl2 610 0.907 - 0.907 - - - - - - - pecanex-like 2 (Drosophila), transcript variant X2
69. RABEPK ENSDARG00000112165 112 0.907 - 0.907 - - - - - - - Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
70. aqp7 ENSDARG00000026787 37 0.905 - - 0.905 - - - - - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
71. CU633991.1 CU633991.1 16 0.895 - 0.895 - - - - - - -
72. DDX17 DDX17 143 0.895 - - - - - 0.895 - - -
73. si:dkey-262g12.3 ENSDARG00000094612 41 0.895 - 0.895 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
74. si:ch211-236g6.1 ENSDARG00000071590 28 0.895 - 0.895 - - - - - - - si:ch211-236g6.1 [Source:ZFIN;Acc:ZDB-GENE-050208-448]
75. lrp12 ENSDARG00000098845 999 0.895 - 0.895 - - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
76. aste1 5 0.894 - - 0.894 - - - - - - asteroid homolog 1 (Drosophila)
77. exoc8 ENSDARG00000063211 35 0.893 0.893 - - - - - - - - exocyst complex component 8 [Source:ZFIN;Acc:ZDB-GENE-070410-60]
78. trim35-21 ENSDARG00000102303 7 0.89 - - 0.890 - - - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
79. CLNK 8 0.89 - 0.890 - - - - - - - cytokine dependent hematopoietic cell linker
80. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.888 - 0.888 - - - - - - - adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
81. BX005069.4 BX005069.4 61 0.888 - - 0.888 - - - - - -
82. far1 ENSDARG00000006899 204 0.888 0.888 - - - - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
83. notchl ENSDARG00000088308 28 0.885 - 0.885 - - - - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
84. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 0.885 - 0.885 - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
85. CU207245.1 ENSDARG00000102559 15 0.885 - 0.885 - - - - - - -
86. si:dkey-16j24.1 2 0.885 - 0.885 - - - - - - - si:dkey-16j24.1, transcript variant X1
87. si:dkey-98j1.5 ENSDARG00000094005 10 0.885 - 0.885 - - - - - - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
88. ZNF219 ENSDARG00000079738 1 0.885 - 0.885 - - - - - - - zinc finger protein 219 [Source:ZFIN;Acc:ZDB-GENE-110623-1]
89. PPP2R2B PPP2R2B 257 0.885 - 0.885 - - - - - - -
90. CABZ01044048.1 ENSDARG00000011463 20 0.885 - 0.885 - - - - - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
91. rpap3 ENSDARG00000087962 22 0.885 - 0.885 - - - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
92. si:ch211-26b3.4 ENSDARG00000075491 50 0.885 - 0.885 - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
93. CR394546.1 ENSDARG00000077602 1 0.885 - 0.885 - - - - - - -
94. si:dkey-26g8.5 ENSDARG00000089750 7070 0.885 - 0.885 - - - - - - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
95. FAM132B FAM132B 39 0.885 - 0.885 - - - - - - -
96. cd247l ENSDARG00000077240 25 0.885 - 0.885 - - - - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
97. slc8a4a ENSDARG00000055154 90 0.885 - 0.885 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
98. acap3b ENSDARG00000099240 24 0.885 - 0.885 - - - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
99. NINJ1 ENSDARG00000103663 43 0.885 - 0.885 - - - - - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
100. CABZ01078124.1 CABZ01078124.1 4 0.885 - 0.885 - - - - - - -

There are 975 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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