Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-246m6.5

Gene Name Gene ID Reads Annotation
si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]










Genes with expression patterns similar to si:ch211-246m6.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
2. EMILIN2 EMILIN2 429 2.442 - 0.779 - - - - 0.797 - 0.866
3. urah urah 4152 2.382 - 0.752 - - - 0.841 - - 0.789
4. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 2.32 - 0.790 - - - 0.746 0.784 - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
5. wnt10a ENSDARG00000017155 491 2.299 - - - - - 0.711 0.711 - 0.877 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
6. dsg2 dsg2 4039 2.298 0.814 0.731 - - - - 0.753 - -
7. vcana ENSDARG00000103515 611 2.275 - 0.808 - - - - 0.746 0.721 - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
8. si:dkey-193c22.2 ENSDARG00000076735 2791 2.252 - 0.739 - - - 0.784 0.729 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
9. vcanb ENSDARG00000009401 3611 2.222 - - - - - 0.710 0.769 - 0.743 versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
10. GPR31 431 2.205 - 0.718 - - - - 0.772 0.715 - G protein-coupled receptor 31
11. BX511121.1 ENSDARG00000029997 1774 1.792 - - - - - - - 0.895 0.897
12. afap1l2 ENSDARG00000074806 367 1.784 - - - - - - - 0.836 0.948 actin filament associated protein 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-100318-1]
13. msxb msxb 2650 1.759 - 0.886 - - - - 0.873 - -
14. olfml2a ENSDARG00000005648 1157 1.747 - 0.888 - - - - - - 0.859 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
15. emilin3a ENSDARG00000078052 1652 1.716 - - - - - - - 0.754 0.962 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
16. TMEM179 ENSDARG00000013292 3452 1.709 - - - - - 0.827 0.882 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
17. creb3l2 ENSDARG00000063563 1284 1.693 - - - - - - - 0.769 0.924 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
18. chl1a ENSDARG00000077881 1488 1.69 - - - - - 0.902 0.788 - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
19. ptgs2a ENSDARG00000004539 1207 1.686 - - - - - - 0.806 - 0.880 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
20. si:ch211-243g18.2 ENSDARG00000044261 4483 1.68 - - - - - 0.847 - - 0.833 si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
21. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.671 - 0.774 - - - - - - 0.897 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
22. ssr2 ENSDARG00000005230 31940 1.664 - - - - - - 0.782 - 0.882 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
23. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.664 - - - - - 0.870 0.794 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
24. copa ENSDARG00000004173 3977 1.656 - - - - - - 0.760 - 0.896 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
25. golph3l ENSDARG00000036943 568 1.651 - 0.804 - - - 0.847 - - - golgi phosphoprotein 3-like [Source:ZFIN;Acc:ZDB-GENE-051113-168]
26. rap2b ENSDARG00000103032 2080 1.633 - 0.741 - - - - - - 0.892 RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]
27. sult6b1 ENSDARG00000086826 2070 1.632 - - - - - 0.788 0.844 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
28. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.631 - - - - - - 0.833 0.798 - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
29. cetn4 ENSDARG00000041215 898 1.628 0.774 - - - - - - - 0.854 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
30. pak2a ENSDARG00000068177 8931 1.625 - - - - - 0.735 - - 0.890 p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
31. limk2 ENSDARG00000005104 2598 1.62 - - - - - 0.795 - - 0.825 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
32. rel ENSDARG00000055276 571 1.604 - 0.733 - - - - - - 0.871 v-rel avian reticuloendotheliosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040718-255]
33. lamb1a ENSDARG00000101209 5396 1.604 - - - - - 0.853 0.751 - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
34. ncana 1537 1.603 - - - - - - - 0.733 0.870 neurocan a
35. lrp1b lrp1b 3216 1.598 - 0.722 - - - - - - 0.876
36. ATOX1 ENSDARG00000087693 4016 1.596 0.792 - - - - - 0.804 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
37. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.595 - - - - - 0.768 0.827 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
38. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 1.595 0.839 - - - - 0.756 - - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
39. dlg1 ENSDARG00000009677 706 1.588 - 0.732 - - - - - - 0.856 discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
40. cux1b ENSDARG00000043134 641 1.581 0.759 0.822 - - - - - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
41. dlx5a ENSDARG00000042296 3477 1.579 - - - - - 0.751 0.828 - - distal-less homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-990415-49]
42. BX571949.1 BX571949.1 293 1.579 - - - - - - - 0.717 0.862
43. ypel3 ENSDARG00000055510 1344 1.579 0.738 - - - - - - - 0.841 yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
44. f2 ENSDARG00000036041 3129 1.575 - 0.804 - - - 0.771 - - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
45. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.574 - 0.801 - - - - 0.773 - - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
46. LRG1 LRG1 304 1.574 0.755 - - - - - 0.819 - -
47. grp ENSDARG00000043074 747 1.571 - - - - - - 0.724 - 0.847 gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
48. LIMD2 ENSDARG00000078092 3414 1.57 - - - - - 0.735 0.835 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
49. lipin2 2021 1.567 - 0.760 - - - 0.807 - - - lipin 2, transcript variant X2
50. pitx2 ENSDARG00000036194 2279 1.563 - 0.829 - - - - 0.734 - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
51. axin2 ENSDARG00000100149 4223 1.561 - - - - - - 0.792 - 0.769 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
52. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.56 0.758 - - - - - 0.802 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
53. OMG OMG 1202 1.554 - - - - - 0.701 0.853 - -
54. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 1.55 - - - - - - 0.719 - 0.831 TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
55. vasp vasp 3925 1.548 - - - - - - 0.758 - 0.790
56. bdh2 ENSDARG00000052696 1157 1.547 0.816 0.731 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 2 [Source:ZFIN;Acc:ZDB-GENE-050417-343]
57. zgc:92360 ENSDARG00000038151 2161 1.547 - - - - - 0.720 0.827 - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
58. clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 1.545 0.806 - - - - - 0.739 - - chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]
59. wu:fj08f03 wu:fj08f03 1337 1.542 0.789 - - - - 0.753 - - -
60. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.541 - - - - - 0.818 0.723 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
61. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 1.541 - 0.714 - - - - - - 0.827 churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
62. ctsk ENSDARG00000040251 1111 1.541 - - - - - - - 0.749 0.792 cathepsin K [Source:ZFIN;Acc:ZDB-GENE-001205-4]
63. sp5l ENSDARG00000115868 361 1.536 - - 0.780 - - - - 0.756 - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
64. abca12 ENSDARG00000074749 2712 1.532 - - - - - 0.778 0.754 - - ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
65. si:ch211-117m20.5 ENSDARG00000091996 7246 1.531 0.812 - - - - 0.719 - - - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
66. rac2 ENSDARG00000038010 5837 1.528 0.706 - - - - - 0.822 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
67. f5 ENSDARG00000055705 973 1.528 - 0.807 - - - 0.721 - - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
68. DALRD3 ENSDARG00000068602 3062 1.528 - - - - - 0.740 - - 0.788 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
69. cbfa2t2 ENSDARG00000074337 4323 1.528 - 0.760 - - - - - - 0.768 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
70. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.528 - 0.788 - - - 0.740 - - - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
71. sepp1b 1004 1.526 - 0.814 - - - 0.712 - - - selenoprotein P, plasma, 1b
72. ak5l ENSDARG00000017739 1058 1.524 - - - - - 0.715 0.809 - - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
73. TMC6 TMC6 773 1.521 - - - - - 0.731 0.790 - -
74. lin7c ENSDARG00000027322 3083 1.517 - 0.718 - - - - - - 0.799 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
75. rsrc1 ENSDARG00000033987 552 1.511 - 0.793 - - - 0.718 - - - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
76. oclna ENSDARG00000005108 3280 1.504 - 0.714 - - - - 0.790 - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
77. ctbp2 ctbp2 3255 1.503 - 0.768 - - - - - - 0.735
78. ehd1a ENSDARG00000098853 1092 1.502 - 0.733 - - - - 0.769 - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
79. sb:cb37 ENSDARG00000041645 2018 1.502 0.732 - - - - 0.770 - - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
80. cx44.2 ENSDARG00000034207, ENSDARG00000113651 431 1.495 - 0.717 - - - - 0.778 - - connexin 44.2 [Source:ZFIN;Acc:ZDB-GENE-010619-1]
81. arhgdig ENSDARG00000004034 10368 1.493 - 0.753 - - - - 0.740 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
82. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.49 0.764 - - - - - 0.726 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
83. kazald2 ENSDARG00000078518 3062 1.489 - 0.787 - - - 0.702 - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
84. mst1 ENSDARG00000103308 581 1.489 0.716 - - - - - 0.773 - - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
85. CAMTA2 ENSDARG00000092799 1950 1.487 - - - - - 0.711 - - 0.776 calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
86. efemp2a ENSDARG00000094324 39261 1.487 - - - - 0.702 - - 0.785 - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
87. casp7 ENSDARG00000091836 657 1.484 0.702 - - - - - 0.782 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
88. GPR112 GPR112 515 1.481 - 0.767 - - - - 0.714 - -
89. serpind1 ENSDARG00000021208 665 1.48 - 0.745 - - - 0.735 - - - serpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030711-2]
90. apom ENSDARG00000076838 4732 1.47 - - - - - 0.712 0.758 - - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
91. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.46 - - - 0.711 - - - 0.749 - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
92. capn2a ENSDARG00000091699 5924 1.457 - - - - - - 0.749 - 0.708 calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
93. CABZ01074081.1 CABZ01074081.1 109 1.457 0.718 0.739 - - - - - - -
94. fgfr1op ENSDARG00000003058 449 1.454 - 0.738 - - - - 0.716 - - FGFR1 oncogene partner [Source:ZFIN;Acc:ZDB-GENE-090417-1]
95. gata6 ENSDARG00000103589 746 1.452 - 0.703 - - - - 0.749 - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
96. C3_1 C3_1 637 1.451 - 0.728 - - - 0.723 - - -
97. sidt2 ENSDARG00000045976 1997 1.449 - 0.722 - - - 0.727 - - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
98. tmem258 ENSDARG00000078785 9578 1.449 - 0.727 - - - - 0.722 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
99. CABZ01081656.1 CABZ01081656.1 14 1.446 0.718 0.728 - - - - - - -
100. daam1b ENSDARG00000009689 1520 1.443 - - - - - 0.730 0.713 - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]

There are 1292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA