Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-245l1.1

Gene Name Gene ID Reads Annotation
si:ch211-245l1.1 si:ch211-245l1.1 1










Genes with expression patterns similar to si:ch211-245l1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - 1.000 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
2. CABZ01063402.1 CABZ01063402.1 64 1 - - - - - 1.000 - - -
3. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
4. psmb11 psmb11 5 1 - - - - - 1.000 - - -
5. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - - - 1.000 - - -
6. si:ch211-274p24.3 si:ch211-274p24.3 72 1 - - - - - 1.000 - - -
7. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - - 1.000 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
8. PLCB1 2 1 - - - - - 1.000 - - - phospholipase C beta 1
9. CR678040.1 CR678040.1 117 1 - - - - - 1.000 - - -
10. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
11. OSBPL1A ENSDARG00000105147 16 1 - - - - - 1.000 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
12. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
13. HIST1H4J HIST1H4J 31 1 - - - - - 1.000 - - -
14. FBLN7 ENSDARG00000089519 4 1 - - - - - 1.000 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
15. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
16. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
17. tnk2b ENSDARG00000104409 1 1 - - - - - 1.000 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
18. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - 1.000 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
19. si:ch211-59g22.2 si:ch211-59g22.2 7 1 - - - - - 1.000 - - -
20. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - - - - 1.000 - - -
21. ncanb ENSDARG00000005783 22 1 - - - - - 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
22. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - 1.000 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
23. trpa1b ENSDARG00000031875 39 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
24. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - 1.000 - - -
25. grin2ca ENSDARG00000078149 13 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
26. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
27. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
28. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
29. fgf11b ENSDARG00000043907 16 1 - - - - - 1.000 - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
30. nmu ENSDARG00000043299 67 1 - - - - - 1.000 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
31. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
32. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
33. skor1a ENSDARG00000069030 19 1 - - - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
34. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
35. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
36. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 1 - - - - - 1.000 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
37. ACSL6 12 1 - - - - - 1.000 - - - acyl-CoA synthetase long-chain family member 6
38. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
39. GPR114 GPR114 1 1 - - - - - 1.000 - - -
40. RIC3_1 ENSDARG00000105549 2 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
41. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
42. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
43. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
44. crygm2d14 ENSDARG00000087301 66 1 - - - - - 1.000 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
45. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
46. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
47. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
48. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
49. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
50. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
51. si:dkey-4c15.6 si:dkey-4c15.6 6 1 - - - - - 1.000 - - -
52. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
53. TDRD6 ENSDARG00000070052 1 1 - - - - - 1.000 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
54. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
55. FAM177A1 ENSDARG00000079636 19 1 - - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
56. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
57. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
58. hivep3a ENSDARG00000075928 17 1 - - - - - 1.000 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
59. BRINP3 BRINP3 11 1 - - - - - 1.000 - - -
60. BX511266.1 BX511266.1 21 1 - - - - - 1.000 - - -
61. trpm2_1 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
62. CYP27A1 CYP27A1 4 1 - - - - - 1.000 - - -
63. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
64. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
65. mir15a-1 36 1 - - - - - 1.000 - - - microRNA 15a-1
66. BX927362.1 ENSDARG00000097469 13 1 - - - - - 1.000 - - -
67. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
68. KCNA2_1 KCNA2_1 15 1 - - - - - 1.000 - - -
69. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
70. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - - 1.000 - - -
71. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
72. LAMA3 ENSDARG00000071462 5 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
73. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
74. gabbr1a ENSDARG00000018967 2 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
75. CR388129.1 ENSDARG00000097173 89 1 - - - - - 1.000 - - -
76. BX005052.1 BX005052.1 16 1 - - - - - 1.000 - - -
77. CABZ01073654.1 CABZ01073654.1 16 1 - - - - - 1.000 - - -
78. si:dkey-234k7.2 si:dkey-234k7.2 4 1 - - - - - 1.000 - - -
79. ppp4r4 ENSDARG00000010407 1 1 - - - - - 1.000 - - - protein phosphatase 4, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041001-164]
80. rbp1b rbp1b 36 1 - - - - - 1.000 - - -
81. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - 1.000 - - -
82. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
83. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
84. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
85. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
86. ARHGEF10L ARHGEF10L 18 1 - - - - - 1.000 - - -
87. cecr1b 2 1 - - - - - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
88. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - - - - - 1.000 - - -
89. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
90. ccr7 ENSDARG00000044561 2 1 - - - - - 1.000 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
91. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
92. dab1b ENSDARG00000003290 7 1 - - - - - 1.000 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
93. CABZ01044048.1 ENSDARG00000011463 20 1 - - - - - 1.000 - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
94. rhbdd3 ENSDARG00000079816 2 1 - - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
95. JAKMIP1 ENSDARG00000076090 55 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
96. kdm2ba ENSDARG00000036593 96 1 - - - - - 1.000 - - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
97. CR318629.1 CR318629.1 7 1 - - - - - 1.000 - - -
98. shank3a ENSDARG00000063332 5 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
99. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
100. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA