Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-243j20.2

Gene Name Gene ID Reads Annotation
si:ch211-243j20.2 ENSDARG00000033916 347 si:ch211-243j20.2 [Source:ZFIN;Acc:ZDB-GENE-041014-345]










Genes with expression patterns similar to si:ch211-243j20.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-243j20.2 ENSDARG00000033916 347 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-243j20.2 [Source:ZFIN;Acc:ZDB-GENE-041014-345]
2. gipc1 ENSDARG00000104483 2913 2.2 - 0.718 - - - 0.751 0.731 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
3. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.655 - 0.868 - - - 0.787 - - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
4. nptx1l ENSDARG00000074671 569 1.61 - 0.721 - - - 0.889 - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
5. mamdc1 mamdc1 156 1.606 - 0.793 - - - 0.813 - - -
6. PMFBP1 ENSDARG00000101917 292 1.603 - - - - - 0.893 0.710 - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
7. si:ch211-282k23.2 ENSDARG00000093591 447 1.602 - 0.887 - - - 0.715 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
8. kifap3b ENSDARG00000006862 613 1.601 - 0.823 - - - 0.778 - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
9. CACFD1 ENSDARG00000090818 1298 1.58 - - - - - 0.858 0.722 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
10. ptbp2b ENSDARG00000015901 2458 1.577 - - - - - 0.814 0.763 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
11. CABZ01072954.1 CABZ01072954.1 2330 1.576 - - - - - 0.837 0.739 - -
12. caly ENSDARG00000036008 1002 1.575 - - - - 0.761 0.814 - - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
13. nrn1a ENSDARG00000071860 1311 1.57 - 0.755 - - - 0.815 - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
14. olfm1a ENSDARG00000018270 107 1.567 - - - - - 0.858 0.709 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
15. nfyba ENSDARG00000039185 1804 1.564 - - - - - 0.820 0.744 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
16. camk1da ENSDARG00000074905, ENSDARG00000111604 479 1.563 - - - - - 0.716 0.847 - - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
17. hcfc1b ENSDARG00000012519 3633 1.555 - - - - - 0.780 0.775 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
18. lrrc4.2 ENSDARG00000003020 235 1.554 - - - - 0.700 0.854 - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
19. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.549 - 0.714 - - - 0.835 - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
20. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.539 - - - - - 0.744 0.795 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
21. phc2b_1 ENSDARG00000013224 1316 1.536 - - - 0.723 - 0.813 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
22. sumo3a ENSDARG00000028119 13447 1.53 - - - - - 0.758 0.772 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
23. six4a ENSDARG00000004695 413 1.525 - 0.784 - - - 0.741 - - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
24. gpsm1b ENSDARG00000054874 1308 1.525 - - - - - 0.820 0.705 - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
25. ENSDARG00000086878 ENSDARG00000086878 332 1.524 - - - - - 0.816 0.708 - -
26. jazf1a ENSDARG00000102551 767 1.521 - - - - - 0.702 0.819 - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
27. tubgcp2 ENSDARG00000013079 1520 1.52 - - - - - 0.776 0.744 - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
28. pspc1 ENSDARG00000006621 966 1.517 - - - - - 0.786 0.731 - - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
29. exoc6 ENSDARG00000020521 1533 1.508 - - - - - 0.798 0.710 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
30. pld3 ENSDARG00000068199 205 1.506 - - - - - 0.761 0.745 - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
31. cplx4c ENSDARG00000094889 253 1.506 - 0.760 - - - 0.746 - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
32. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.501 - - - - - 0.789 0.712 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
33. ablim1a ENSDARG00000060149 228 1.489 - - - - - 0.782 0.707 - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
34. setd1a ENSDARG00000060030 874 1.488 - - - - - 0.768 0.720 - - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
35. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.488 - - - - - 0.715 0.773 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
36. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.487 - 0.774 - - - - 0.713 - - LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
37. st8sia2 ENSDARG00000018788 2183 1.484 - - - - - 0.758 0.726 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
38. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.48 - - - - - 0.747 0.733 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
39. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.476 - 0.746 - - - 0.730 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
40. si:dkey-54g2.6 si:dkey-54g2.6 252 1.472 - - - - - 0.703 0.769 - -
41. C23H20orf112 C23H20orf112 545 1.47 - 0.766 - - - 0.704 - - -
42. chrnb2b ENSDARG00000017790 155 1.469 - - - - - 0.726 0.743 - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
43. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.459 - - - - - 0.708 0.751 - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
44. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.457 - - - - - 0.744 0.713 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
45. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.456 - - - - - 0.732 0.724 - - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
46. rbms3 ENSDARG00000044574 2514 1.452 - - - - - 0.740 0.712 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
47. ccnt2b ENSDARG00000036510 3353 1.451 - - - 0.703 - - 0.748 - - cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
48. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.449 - - - - - 0.724 0.725 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
49. synj1 ENSDARG00000025011, ENSDARG00000110664, ENSDARG00000111319 542 1.447 - - - - - 0.743 0.704 - - synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]
50. DTX4 ENSDARG00000076302 2642 1.446 - - - - - 0.733 0.713 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
51. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.444 - - - - - 0.712 0.732 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
52. celf3a ENSDARG00000034668 2432 1.443 - 0.700 - - - 0.743 - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
53. crfb6 1137 1.435 - - - 0.723 - 0.712 - - - cytokine receptor family member b6
54. plekhg7 ENSDARG00000062855 308 1.433 - 0.724 - - - - 0.709 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
55. si:ch1073-280h16.1 si:ch1073-280h16.1 229 1.432 - - - - - 0.723 0.709 - -
56. irx3b ENSDARG00000031138 2538 1.426 - - - - - 0.702 0.724 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
57. slc44a5b ENSDARG00000057419 534 1.423 - - - - - 0.715 0.708 - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
58. upf3a ENSDARG00000069297, ENSDARG00000111067 196 0.945 - - - - - 0.945 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
59. TTBK1_1 TTBK1_1 132 0.926 - - - - - 0.926 - - -
60. tmem201 ENSDARG00000077307 453 0.92 - - - - - 0.920 - - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
61. mepce ENSDARG00000059461 703 0.916 - - - - - - 0.916 - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
62. syt9a ENSDARG00000003994 298 0.915 - - - - - 0.915 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
63. mapre3b ENSDARG00000102878 362 0.91 - 0.910 - - - - - - - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
64. tmem91 ENSDARG00000068456 81 0.903 - - - - - 0.903 - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
65. leng1 ENSDARG00000037633 351 0.902 - 0.902 - - - - - - - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
66. hs3st3l ENSDARG00000059903 184 0.901 - - - - - 0.901 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
67. atcaya ENSDARG00000071678 344 0.9 - - - - - 0.900 - - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
68. bsk146 ENSDARG00000099069 274 0.897 - - - - - 0.897 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
69. pnoca ENSDARG00000025024 467 0.896 - - - - - 0.896 - - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
70. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.896 - - - - - 0.896 - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
71. syngr1a ENSDARG00000002564 209 0.895 - - - - - 0.895 - - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
72. mir34 176 0.894 - - - - - 0.894 - - - microRNA 34
73. trpv1 ENSDARG00000059883 80 0.892 - - - - - 0.892 - - - transient receptor potential cation channel, subfamily V, member 1 [Source:ZFIN;Acc:ZDB-GENE-030912-8]
74. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 0.891 - - - - - 0.891 - - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
75. cacng8a ENSDARG00000020450 32 0.889 - - - - - 0.889 - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
76. runx1t1 ENSDARG00000003680 633 0.887 - 0.887 - - - - - - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
77. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.886 - - - - - 0.886 - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
78. atp2b3b ENSDARG00000023445 1424 0.886 - - - - - 0.886 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
79. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 0.886 - - - - - - 0.886 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
80. spopla ENSDARG00000010563 775 0.886 - 0.886 - - - - - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
81. ELMO2 ENSDARG00000063527 301 0.885 - - - - - 0.885 - - - engulfment and cell motility 2 [Source:ZFIN;Acc:ZDB-GENE-140106-84]
82. hnrnpa1 hnrnpa1 1302 0.885 - - - - - - 0.885 - -
83. st6gal1 ENSDARG00000044514 142 0.884 - - - - - 0.884 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
84. ARHGAP32_1 ARHGAP32_1 124 0.883 - - - - - - 0.883 - -
85. CR388231.1 ENSDARG00000098710 153 0.883 - - - - - 0.883 - - -
86. st6galnac5a ENSDARG00000039220 76 0.882 - - - - - 0.882 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
87. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 0.88 - - - - - 0.880 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
88. dpp6b ENSDARG00000024744 234 0.879 - - - - - 0.879 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
89. hpca ENSDARG00000018397, ENSDARG00000110115 3866 0.878 - - - - - 0.878 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
90. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 0.877 - - - - - 0.877 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
91. stmn1b ENSDARG00000033655 9491 0.877 - - - - - 0.877 - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
92. atl1 ENSDARG00000060481 251 0.876 - - - - - 0.876 - - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
93. eltd1 eltd1 295 0.874 - - - - - 0.874 - - -
94. SGIP1 SGIP1 236 0.873 - - - - - 0.873 - - -
95. dtnbb ENSDARG00000013020 280 0.872 - - - - - 0.872 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
96. fam110b ENSDARG00000088073 420 0.871 - - - - - 0.871 - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
97. nrcam nrcam 397 0.871 - - - - - 0.871 - - -
98. DSCAML1 ENSDARG00000098057 321 0.871 - - - - - 0.871 - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
99. glra1 ENSDARG00000012019 315 0.868 - - - - - 0.868 - - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
100. me1 ENSDARG00000053215 107 0.868 - - - - - 0.868 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]

There are 1270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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