Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-243a22.1

Gene Name Gene ID Reads Annotation
si:ch211-243a22.1 si:ch211-243a22.1 42










Genes with expression patterns similar to si:ch211-243a22.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-243a22.1 si:ch211-243a22.1 42 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. LRRK1_1 LRRK1_1 11 2.764 0.764 1.000 - - - 1.000 - - -
3. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 2.443 0.808 0.723 0.912 - - - - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
4. pax7b ENSDARG00000070818 282 2.333 - 0.866 0.732 - - 0.735 - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
5. si:ch211-108c6.2 14 2 - 1.000 - - - 1.000 - - - si:ch211-108c6.2
6. nid2b ENSDARG00000009471 4 2 - 1.000 - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
7. PCDH10 PCDH10 7 2 - 1.000 - - - 1.000 - - -
8. GABRA3 ENSDARG00000090883 5 2 - 1.000 - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
9. amy2a ENSDARG00000013856 13 2 - 1.000 - - - - 1.000 - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
10. BX927122.3 BX927122.3 19 2 - 1.000 - - - 1.000 - - -
11. apnl ENSDARG00000090900 21 1.997 - 1.000 0.997 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
12. si:dkey-81p22.11 ENSDARG00000093797 68 1.966 - 1.000 0.966 - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
13. DOCK4 DOCK4 78 1.903 - 1.000 0.903 - - - - - -
14. slc15a1a ENSDARG00000100315 23 1.855 - 1.000 - - - - - 0.855 - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
15. dclk1a ENSDARG00000018856 177 1.806 - - 0.961 - - 0.845 - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
16. BX005085.2 ENSDARG00000098122 196 1.806 - - 0.887 - - - 0.919 - -
17. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.771 - 1.000 - - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
18. si:dkey-103d23.5 26 1.771 - - - - - 0.771 1.000 - - si:dkey-103d23.5
19. ABCC6 ABCC6 5 1.764 0.764 1.000 - - - - - - -
20. si:dkey-24p1.7 ENSDARG00000089404 7 1.764 0.764 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
21. CABZ01057951.1 CABZ01057951.1 10 1.764 0.764 1.000 - - - - - - -
22. erap2 ENSDARG00000098618 16 1.764 0.764 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
23. sytl4 ENSDARG00000102433 19 1.764 0.764 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
24. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.764 0.764 - - - - 1.000 - - -
25. CABZ01078314.1 CABZ01078314.1 44 1.76 0.764 - 0.996 - - - - - -
26. si:ch211-198c19.2 si:ch211-198c19.2 165 1.759 - 1.000 - - - - - 0.759 -
27. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.754 - 1.000 - - - 0.754 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
28. si:ch73-346o4.3 si:ch73-346o4.3 29 1.738 - - - - - 1.000 - 0.738 -
29. pole2 ENSDARG00000100028 42 1.734 0.734 - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
30. ITPRIPL2 88 1.733 - 1.000 - - - - - 0.733 - inositol 1,4,5-trisphosphate receptor interacting protein like 2
31. samd10b ENSDARG00000094377 18 1.725 - - - - 0.725 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
32. slc25a29 ENSDARG00000057352 9 1.718 - 1.000 - - - - 0.718 - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
33. CR626874.1 ENSDARG00000100141 55 1.718 - 1.000 - - - - 0.718 - -
34. CABZ01112732.1 ENSDARG00000068453 4 1.718 - - - - - 1.000 0.718 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
35. BX321870.1 ENSDARG00000098519 9 1.718 - 1.000 - - - - 0.718 - -
36. rx3 ENSDARG00000052893 43 1.718 - - - - - 1.000 0.718 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
37. si:ch211-202m22.1 ENSDARG00000094491 24 1.718 - - - - - 1.000 0.718 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
38. NUGGC NUGGC 9 1.718 - - - - - 1.000 0.718 - -
39. zgc:173593 ENSDARG00000077360 10 1.718 - 1.000 - - - - 0.718 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
40. SMARCA4 ENSDARG00000104339 48 1.717 - 1.000 - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
41. pcyox1 ENSDARG00000103052 20 1.715 0.715 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
42. rab3c ENSDARG00000014462, ENSDARG00000042803 508 1.711 - 0.883 0.828 - - - - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
43. tnxb 30 1.707 0.707 1.000 - - - - - - - tenascin XB
44. mapk15 ENSDARG00000100822 157 1.67 - 0.887 - 0.783 - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
45. F2RL3 ENSDARG00000079399 29 1.665 - - 0.947 - - - 0.718 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
46. FAM120A ENSDARG00000075021 73 1.652 - 0.726 0.926 - - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
47. wu:fd55e03 wu:fd55e03 41 1.611 0.764 - - - - - 0.847 - -
48. si:ch73-173m3.3 si:ch73-173m3.3 425 1.586 - 0.872 - - 0.714 - - - -
49. si:dkey-193i10.3 si:dkey-193i10.3 70 1.583 - 0.730 - - - - 0.853 - -
50. BX324131.3 BX324131.3 278 1.532 - 0.760 - - - 0.772 - - -
51. WDR93 ENSDARG00000087191 51 1.517 0.764 - - - 0.753 - - - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
52. PELI3 ENSDARG00000087452, ENSDARG00000111338 166 1.509 - - - - - - 0.780 0.729 - pellino E3 ubiquitin protein ligase family member 3 [Source:ZFIN;Acc:ZDB-GENE-110304-4]
53. ZNF337_23 ZNF337_23 39 1.508 0.790 - - - - - 0.718 - -
54. CABZ01027547.1 CABZ01027547.1 128 1.496 - - - - 0.761 0.735 - - -
55. efhb ENSDARG00000069703 9 1.482 0.764 - - - - - 0.718 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
56. p2rx4b ENSDARG00000042452 14 1.477 - - - - 0.759 - 0.718 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
57. cacna1sb ENSDARG00000042552 1320 1.477 - - 0.769 - - - - 0.708 - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
58. ELMO1 ENSDARG00000098753 114 1.471 0.764 - - - - 0.707 - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
59. csnk1g1 ENSDARG00000104342 57 1.454 - - - - - 0.722 0.732 - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
60. si:dkey-13m3.1 si:dkey-13m3.1 45 1.438 - - - - - 0.720 0.718 - -
61. cabp5a ENSDARG00000002576 14 1.428 - - - - 0.710 - 0.718 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
62. VSIG10L ENSDARG00000089237 12 1.418 - - - 0.700 - - 0.718 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
63. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
64. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
65. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
66. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
67. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
68. FAXC FAXC 102 1 - 1.000 - - - - - - -
69. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
70. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
71. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
72. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
73. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
74. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
75. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
76. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
77. zgc:112146 ENSDARG00000104829 34 1 - - - - - 1.000 - - - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
78. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
79. il12bb ENSDARG00000054542 6 1 - 1.000 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
80. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
81. asip asip 2 1 - - - - - 1.000 - - -
82. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
83. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
84. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
85. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
86. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
87. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
88. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
89. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
90. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
91. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
92. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
93. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
94. scg2b ENSDARG00000038574 345 1 - 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
95. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
96. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
97. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
98. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
99. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
100. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]

There are 1423 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA