Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-241o7.5

Gene Name Gene ID Reads Annotation
si:ch211-241o7.5 si:ch211-241o7.5 1387










Genes with expression patterns similar to si:ch211-241o7.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-241o7.5 si:ch211-241o7.5 1387 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cdkn2aipnl ENSDARG00000053395 5107 2.55 - 0.804 - - - 0.807 0.939 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
3. socs5a ENSDARG00000100717 6927 2.48 - 0.734 0.772 - - - 0.974 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
4. zgc:110655 zgc:110655 4237 2.279 - 0.729 0.731 - - - 0.819 - -
5. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.849 - 0.854 - - - - 0.995 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
6. laptm4b ENSDARG00000035870, ENSDARG00000110893 960 1.826 - 0.868 - - - - 0.958 - - lysosomal protein transmembrane 4 beta [Source:ZFIN;Acc:ZDB-GENE-030616-616]
7. pes ENSDARG00000018902 3286 1.807 - 0.820 - - - - 0.987 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
8. ERRFI1 ERRFI1 664 1.805 - 0.809 - - - - 0.996 - -
9. snrnp70 ENSDARG00000077126 5921 1.803 - 0.829 - - - - 0.974 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
10. pld1a ENSDARG00000056228 765 1.801 - 0.814 - - - - 0.987 - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
11. fzr1 fzr1 2984 1.797 - 0.824 - - - - 0.973 - -
12. mastl ENSDARG00000055566 1487 1.792 - 0.806 - - - - 0.986 - - microtubule associated serine/threonine kinase-like [Source:ZFIN;Acc:ZDB-GENE-040801-128]
13. gli1 ENSDARG00000101244 534 1.789 - 0.795 - - - - 0.994 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
14. ap1s1 ENSDARG00000056803 3854 1.787 - - 0.814 - - - 0.973 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
15. COL13A1 1565 1.784 - 0.793 - - - - 0.991 - - collagen, type XIII, alpha 1, transcript variant X1
16. wbscr22 wbscr22 644 1.779 - 0.808 - - - - 0.971 - -
17. smyd2b ENSDARG00000005629 8181 1.776 0.906 0.870 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
18. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.77 - - - 0.838 - - 0.932 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
19. prkaa1 ENSDARG00000060596 1448 1.768 - - 0.774 - - - 0.994 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
20. CABZ01068263.1 CABZ01068263.1 712 1.761 - - 0.766 - - - 0.995 - -
21. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.761 - - 0.782 - - - 0.979 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
22. rpl7a ENSDARG00000019230 1204 1.759 - 0.777 - - - - 0.982 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
23. mrpl12 ENSDARG00000038768 5539 1.756 - 0.795 - - - - 0.961 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
24. chst11 ENSDARG00000034375 2701 1.754 0.795 - - - - - 0.959 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
25. asb6 ENSDARG00000007125 389 1.746 - - - - - 0.750 0.996 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
26. agk ENSDARG00000009837, ENSDARG00000113514 811 1.744 - 0.747 - - - - 0.997 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
27. mrpl27 ENSDARG00000032985 2158 1.743 - 0.784 - - - - 0.959 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
28. VPS37B_1 VPS37B_1 1816 1.741 - - 0.768 - - - 0.973 - -
29. nup107 ENSDARG00000016010 1043 1.739 - - 0.752 - - - 0.987 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
30. fbxo30a ENSDARG00000058561 867 1.736 - - 0.748 - - - 0.988 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
31. clptm1l ENSDARG00000021048 1234 1.728 - - 0.751 - - - 0.977 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
32. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.726 0.757 - - - - - 0.969 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
33. ubr2 ENSDARG00000070164 3960 1.725 - - - 0.797 - - 0.928 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
34. znf106a ENSDARG00000016651 6049 1.725 0.864 0.861 - - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
35. cul1b ENSDARG00000007691 719 1.724 - 0.731 - - - - 0.993 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
36. TAF2 ENSDARG00000102307 1401 1.724 - - - 0.770 - - 0.954 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
37. mfn1b ENSDARG00000079219 1699 1.723 - 0.788 - - - - 0.935 - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
38. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.721 0.877 0.844 - - - - - - -
39. uhrf1 ENSDARG00000103409 3282 1.721 - - 0.737 - - - 0.984 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
40. ndufa6 ENSDARG00000038028 2653 1.721 - 0.793 - - - - 0.928 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
41. PVRL4 1691 1.72 - - 0.749 - - - 0.971 - - poliovirus receptor-related 4
42. etnk1 ENSDARG00000019420 2166 1.719 - - 0.779 - - - 0.940 - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
43. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.717 - 0.724 - - - - 0.993 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
44. ehbp1l1b ENSDARG00000079895 559 1.715 0.817 0.898 - - - - - - - EH domain binding protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-238]
45. lzic ENSDARG00000055899 638 1.712 - - - 0.719 - - 0.993 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
46. plecb ENSDARG00000021987 13621 1.71 0.801 0.909 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
47. tmem242 ENSDARG00000037070 1081 1.71 0.862 0.848 - - - - - - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
48. cux2a 493 1.701 - - - 0.719 - - 0.982 - - cut-like homeobox 2a
49. rpz5 ENSDARG00000075718 1703 1.701 - - - 0.777 - - 0.924 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
50. trdn ENSDARG00000041779 4283 1.7 0.851 0.849 - - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
51. eftud2 ENSDARG00000012261 3081 1.698 - 0.722 - - - - 0.976 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
52. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.697 - - 0.768 - - - 0.929 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
53. mob2b ENSDARG00000012005 395 1.695 - 0.702 - - - - 0.993 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
54. CCRN4L CCRN4L 518 1.69 0.819 0.871 - - - - - - -
55. bzw2 ENSDARG00000035918 1502 1.689 0.737 - - - - - 0.952 - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
56. klhl40a ENSDARG00000039052 2537 1.688 0.782 0.906 - - - - - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
57. xirp2a ENSDARG00000071113 7113 1.686 0.770 0.916 - - - - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
58. limch1a ENSDARG00000074275 2981 1.683 0.818 0.865 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
59. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.68 0.790 0.890 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
60. pygma ENSDARG00000055518 15972 1.68 0.821 0.859 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
61. ryr3 ENSDARG00000071331 6795 1.679 0.835 0.844 - - - - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
62. etfdh ENSDARG00000038834 1811 1.674 - 0.705 - - - - 0.969 - - electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
63. trim55a ENSDARG00000029596 2858 1.672 0.787 0.885 - - - - - - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
64. ntmt1 ENSDARG00000022399 5779 1.671 0.801 0.870 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
65. pdhx ENSDARG00000051756 924 1.67 - 0.851 - - - 0.819 - - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
66. actn3b ENSDARG00000001431 15747 1.669 0.751 0.918 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
67. prkcda ENSDARG00000009208 1508 1.667 - - - 0.800 - - 0.867 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
68. ppp1r14c ENSDARG00000077341 1587 1.665 0.823 0.842 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
69. chrnd ENSDARG00000019342 2728 1.664 0.836 0.828 - - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
70. cacng1 cacng1 3118 1.661 0.792 0.869 - - - - - - -
71. cmya5 ENSDARG00000061379 1423 1.654 0.856 0.798 - - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
72. aqp4 ENSDARG00000010565 624 1.65 0.839 0.811 - - - - - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
73. ankrd13c ENSDARG00000103831 3593 1.647 - - 0.740 - - - 0.907 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
74. MYOM1 MYOM1 3870 1.646 0.809 0.837 - - - - - - -
75. ITGB1BP2 ENSDARG00000030176 2472 1.642 0.779 0.863 - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
76. PTP4A3 ENSDARG00000039997 3814 1.639 0.804 0.835 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
77. arpp21 ENSDARG00000061081 892 1.636 0.802 0.834 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
78. znf385a ENSDARG00000009899 3433 1.634 0.726 - - - - - 0.908 - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
79. sh3bgr ENSDARG00000021633 3498 1.634 0.825 0.809 - - - - - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
80. prx ENSDARG00000017246 6183 1.633 0.831 0.802 - - - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
81. stac3 ENSDARG00000098883 1765 1.631 0.787 0.844 - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
82. hhatla ENSDARG00000039051 6598 1.63 0.799 0.831 - - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
83. PHB2 PHB2 3755 1.627 0.701 0.926 - - - - - - -
84. srl ENSDARG00000104587 11126 1.625 0.756 0.869 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
85. txlnbb ENSDARG00000076241 6396 1.624 0.745 0.879 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
86. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.618 0.785 0.833 - - - - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
87. CU638714.1 ENSDARG00000100303 2132 1.617 0.802 0.815 - - - - - - -
88. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.617 0.788 0.829 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
89. vcl vcl 6667 1.615 0.743 0.872 - - - - - - -
90. TENC1 TENC1 1729 1.614 0.786 0.828 - - - - - - -
91. klhl40b ENSDARG00000019125 3633 1.613 0.717 - - - - - 0.896 - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
92. sgcb ENSDARG00000052341 4168 1.61 - 0.895 - - - - 0.715 - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
93. CCDC86 CCDC86 2023 1.608 0.707 0.901 - - - - - - -
94. zgc:153662 zgc:153662 4604 1.605 0.742 0.863 - - - - - - -
95. LIMD1 LIMD1 1306 1.605 0.789 0.816 - - - - - - -
96. apobec2a ENSDARG00000018881 4790 1.605 0.721 0.884 - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
97. C13H10orf71 3489 1.605 0.707 0.898 - - - - - - - chromosome 13 C10orf71 homolog
98. FHOD3_1 FHOD3_1 983 1.603 0.759 0.844 - - - - - - -
99. CU633479.5 ENSDARG00000114818 1815 1.598 0.711 0.887 - - - - - - -
100. smyd1b ENSDARG00000091253 4964 1.596 0.797 0.799 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]

There are 1938 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA