Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-241n15.1

Gene Name Gene ID Reads Annotation
si:ch211-241n15.1 si:ch211-241n15.1 632










Genes with expression patterns similar to si:ch211-241n15.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-241n15.1 si:ch211-241n15.1 632 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ACBD3 ENSDARG00000042623 159 1.778 - - - - - - 0.822 - 0.956 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
3. timeless ENSDARG00000078497 1114 1.751 - 0.846 - - - - - - 0.905 timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
4. MAP4_1 MAP4_1 1153 1.716 - - - - - - 0.782 - 0.934
5. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.712 - - - - - - 0.771 - 0.941 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
6. CNOT4_1 CNOT4_1 697 1.702 - 0.800 - - - - - - 0.902
7. FAM83H FAM83H 190 1.692 - 0.737 - - - - - - 0.955
8. BACH1 BACH1 1021 1.69 - 0.806 - - - - - - 0.884
9. rbks ENSDARG00000019877 126 1.681 - 0.771 - - - - 0.910 - - ribokinase [Source:ZFIN;Acc:ZDB-GENE-040625-112]
10. ecd ENSDARG00000022944, ENSDARG00000114710 273 1.676 0.724 - - - - - - - 0.952 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
11. ptgs1 ENSDARG00000052148 2443 1.662 - - - 0.732 - - - - 0.930 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
12. vps18 ENSDARG00000070433 320 1.654 - - - - - 0.773 0.881 - - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
13. slc1a7a ENSDARG00000034940 149 1.637 - 0.731 - - - - - - 0.906 solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
14. SEC16A 1707 1.636 - - - - - - 0.802 - 0.834 SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X3
15. brd8 ENSDARG00000025071 2605 1.631 - - - - - - 0.717 - 0.914 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
16. rangap1a ENSDARG00000041317 1456 1.619 - - - - - - 0.774 - 0.845 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
17. CCDC30 ENSDARG00000056961 178 1.601 0.814 0.787 - - - - - - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
18. rreb1a ENSDARG00000063701 915 1.589 - - - - - - 0.711 - 0.878 ras responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030219-137]
19. C13H4orf32 C13H4orf32 174 1.547 0.777 - - - - - 0.770 - -
20. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.546 0.741 - - - - 0.805 - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
21. epn2 ENSDARG00000008377 5458 1.536 - - - - - - 0.735 - 0.801 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
22. rwdd3 ENSDARG00000057315 289 1.534 0.762 0.772 - - - - - - - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
23. CDS1 ENSDARG00000019549 1659 1.53 - - - - - - 0.741 - 0.789 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
24. foxi1 ENSDARG00000104566 176 1.501 0.798 0.703 - - - - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
25. KLHL7 ENSDARG00000101445 684 1.499 0.778 - - - - - 0.721 - - kelch-like family member 7 [Source:ZFIN;Acc:ZDB-GENE-130212-1]
26. DRD5 DRD5 142 1.495 - 0.757 - - - - - 0.738 -
27. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.463 0.742 0.721 - - - - - - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
28. rnf144aa ENSDARG00000020600 768 1.462 0.717 0.745 - - - - - - - ring finger protein 144aa [Source:ZFIN;Acc:ZDB-GENE-041001-88]
29. traip ENSDARG00000011262 410 1.459 - 0.759 - - - - - 0.700 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
30. ykt6 ENSDARG00000038308 473 1.428 0.720 0.708 - - - - - - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
31. KBTBD2 ENSDARG00000087226 707 1.41 - 0.709 - - - - 0.701 - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
32. FP236810.2 ENSDARG00000113218 140 0.967 - - - - - - - - 0.967 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
33. mlx ENSDARG00000037891 433 0.964 - - - - - - - - 0.964 MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]
34. chid1 ENSDARG00000069673 675 0.962 - - - - - - - - 0.962 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
35. rnf170 ENSDARG00000104069 838 0.961 - - - - - - - - 0.961 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
36. si:ch73-138e16.8 175 0.96 - - - - - - - - 0.960 si:ch73-138e16.8
37. tp53i11b ENSDARG00000006025 569 0.959 - - - - - - - - 0.959 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
38. TPMT TPMT 138 0.959 - - - - - - - - 0.959
39. nrg1 ENSDARG00000104314 1081 0.959 - - - - - - - - 0.959 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
40. casp2 ENSDARG00000062052 559 0.959 - - - - - - - - 0.959 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
41. C20H1orf131 C20H1orf131 406 0.958 - - - - - - - - 0.958
42. CT030712.1 ENSDARG00000044355 83 0.958 - - - - - - - - 0.958 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
43. myo18ab ENSDARG00000061862 124 0.958 - - - - - - - - 0.958 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
44. rnf165a ENSDARG00000077906 133 0.958 - - - - - - - - 0.958 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
45. enpp6 ENSDARG00000040469 187 0.958 - - - - - - - - 0.958 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
46. C25H12orf4 C25H12orf4 317 0.958 - - - - - - - - 0.958
47. CR388047.3 ENSDARG00000117023 89 0.958 - - - - - - - - 0.958
48. zgc:153151 ENSDARG00000069563 126 0.957 - - - - - - - - 0.957 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
49. lrp1bb ENSDARG00000061517 172 0.957 - - - - - - - - 0.957 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
50. prmt10 prmt10 312 0.957 - - - - - - - - 0.957
51. TIMP4 TIMP4 599 0.957 - - - - - - - - 0.957
52. per1b ENSDARG00000012499 320 0.956 - - - - - - - - 0.956 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
53. MAP1S MAP1S 123 0.956 - - - - - - - - 0.956
54. BX569781.3 BX569781.3 576 0.956 - - - - - - - - 0.956
55. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.956 - - - - - - - - 0.956 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
56. ERAP1_1 ERAP1_1 64 0.956 - - - - - - - - 0.956
57. cd36 ENSDARG00000032639 288 0.955 - - - - - - - - 0.955 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
58. CABZ01063402.1 CABZ01063402.1 64 0.955 - - - - - - - - 0.955
59. si:ch211-89o5.1 si:ch211-89o5.1 91 0.955 - - - - - - - - 0.955
60. si:dkey-246e3.4 ENSDARG00000086390 50 0.955 - - - - - - - - 0.955 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
61. CABZ01008011.1 CABZ01008011.1 761 0.955 - - - - - - - - 0.955
62. trim33l ENSDARG00000086126 241 0.954 - - - - - - - - 0.954 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
63. adpgk ENSDARG00000063525, ENSDARG00000115539 754 0.953 - - - - - - - - 0.953 ADP-dependent glucokinase [Source:ZFIN;Acc:ZDB-GENE-061103-421]
64. polr3a ENSDARG00000102569 1072 0.953 - - - - - - - - 0.953 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
65. prkcbb ENSDARG00000022254 319 0.953 - - - - - - - - 0.953 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
66. GRAMD1C ENSDARG00000076238 795 0.952 - - - - - - - - 0.952 GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
67. nudt15 ENSDARG00000113961 381 0.952 - - - - - - - - 0.952 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
68. asb13b ENSDARG00000089833 251 0.951 - - - - - - - - 0.951 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
69. zgc:112263 zgc:112263 473 0.951 - - - - - - - - 0.951
70. si:ch211-195h23.3 ENSDARG00000068431 322 0.951 - - - - - - - - 0.951 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
71. nfu1 ENSDARG00000068125 1743 0.951 - - - - - - - - 0.951 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
72. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.95 - - - - - - - - 0.950 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
73. MIER3 MIER3 114 0.95 - - - - - - - - 0.950
74. cadpsa ENSDARG00000043661 160 0.95 - - - - - - - - 0.950 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
75. dhps ENSDARG00000003270 827 0.95 - 0.950 - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
76. eve1 ENSDARG00000056012 144 0.949 - - - - - - - - 0.949 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
77. KIF2A_1 ENSDARG00000043571 189 0.949 - - - - - - - - 0.949 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
78. b3gat2 ENSDARG00000030733 348 0.949 - - - - - - - - 0.949 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
79. ino80 ENSDARG00000070432 712 0.948 - - - - - - - - 0.948 INO80 complex subunit [Source:ZFIN;Acc:ZDB-GENE-041014-72]
80. cog2 ENSDARG00000004037 462 0.948 - - - - - - - - 0.948 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
81. EMP3 EMP3 523 0.948 - - - - - - - - 0.948
82. trpc4apb ENSDARG00000020647 670 0.948 - - - - - - - - 0.948 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
83. mto1 ENSDARG00000055679 859 0.948 - - - - - - - - 0.948 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
84. ythdf3 ENSDARG00000057939 475 0.948 - - - - - - - - 0.948 YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
85. CR954145.1 CR954145.1 327 0.947 - - - - - - - - 0.947
86. calhm2 ENSDARG00000039482 138 0.947 - - - - - - - - 0.947 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
87. glsb ENSDARG00000040705 1439 0.947 - - - - - - - - 0.947 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
88. si:ch211-232i5.1 ENSDARG00000078072 1337 0.947 - - - - - - - - 0.947 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
89. ikzf5 ENSDARG00000056491, ENSDARG00000116693 686 0.947 - - - - - - - - 0.947 IKAROS family zinc finger 5 [Source:ZFIN;Acc:ZDB-GENE-040801-209]
90. dnajc12 ENSDARG00000086691 260 0.946 - - - - - - - - 0.946 DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
91. rarab ENSDARG00000034893, ENSDARG00000111757 2151 0.946 - - - - - - - - 0.946 retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
92. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.946 - - - - - - - - 0.946 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
93. ide ENSDARG00000075570 4331 0.945 - - - - - - - - 0.945 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
94. nxnl2 ENSDARG00000003934 386 0.945 - - - - - - - - 0.945 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
95. ddx27 ENSDARG00000091831 1471 0.945 - - - - - - - - 0.945 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
96. gba2 ENSDARG00000061472 171 0.945 - - - - - - - - 0.945 glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
97. dlx4b ENSDARG00000071560 446 0.945 - - - - - - - - 0.945 distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
98. ino80e ENSDARG00000022939, ENSDARG00000101892 216 0.945 - 0.945 - - - - - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
99. hoxb13a ENSDARG00000056015 174 0.945 - - - - - - - - 0.945 homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
100. FUZ ENSDARG00000079730 821 0.944 - - - - - - - - 0.944 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]

There are 1099 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA