Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-241j12.3

Gene Name Gene ID Reads Annotation
si:ch211-241j12.3 ENSDARG00000043963 128 si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]










Genes with expression patterns similar to si:ch211-241j12.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-241j12.3 ENSDARG00000043963 128 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
2. adamtsl7 ENSDARG00000055439 575 1.886 0.973 0.913 - - - - - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
3. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 1.874 0.959 0.915 - - - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
4. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 1.787 0.845 0.942 - - - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
5. C24H8orf44 C24H8orf44 405 1.75 0.908 0.842 - - - - - - -
6. cacnb2b ENSDARG00000055565 20 1.735 - 0.874 - - - - 0.861 - - calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]
7. fam178a fam178a 29 1.72 - 0.937 - 0.783 - - - - -
8. CYP46A1 CYP46A1 16 1.716 - 0.937 - - - - - - 0.779
9. abo ENSDARG00000019207 16 1.703 - 0.937 - - 0.766 - - - - ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-081104-23]
10. prkx ENSDARG00000060716 530 1.701 0.845 0.856 - - - - - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
11. gcc1 ENSDARG00000045541 1821 1.692 0.900 0.792 - - - - - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
12. tnk1 ENSDARG00000069433 639 1.681 0.830 0.851 - - - - - - - tyrosine kinase, non-receptor, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7427]
13. crp1 ENSDARG00000071454 31 1.669 0.944 - - 0.725 - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
14. rapgef5a ENSDARG00000075271 282 1.668 0.907 - - - - - 0.761 - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
15. lppr5b lppr5b 23 1.665 - - - 0.802 - - 0.863 - -
16. gnsa ENSDARG00000023766 545 1.665 0.960 0.705 - - - - - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
17. CU570684.5 CU570684.5 55 1.654 - - - - 0.760 - 0.894 - -
18. pou5f3 ENSDARG00000044774 212 1.651 - 0.915 - - - - - - 0.736 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
19. si:dkey-18j14.4 si:dkey-18j14.4 60 1.648 - 0.781 - 0.867 - - - - -
20. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.648 - - - 0.848 - 0.800 - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
21. bag5 ENSDARG00000017316 195 1.641 - 0.852 - - - - 0.789 - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
22. CR352229.2 CR352229.2 784 1.641 - 0.916 - - - - 0.725 - -
23. BX530066.1 BX530066.1 42 1.633 - - - 0.851 0.782 - - - -
24. keap1a ENSDARG00000016132 363 1.628 0.798 - - - - - 0.830 - - kelch-like ECH-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-556]
25. si:ch211-181p13.2 ENSDARG00000096484 94 1.614 - 0.765 - 0.849 - - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
26. sh3bgrl2 ENSDARG00000036878 282 1.61 - 0.805 - - 0.805 - - - - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
27. si:ch211-197g15.8 ENSDARG00000094984 218 1.602 0.818 - - - - - 0.784 - - si:ch211-197g15.8 [Source:ZFIN;Acc:ZDB-GENE-050208-377]
28. wash wash 172 1.582 - 0.750 - - - - 0.832 - -
29. si:rp71-36a1.5_1 ENSDARG00000077252, ENSDARG00000090882 93 1.578 - 0.747 - - - - 0.831 - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
30. CABZ01038514.1 CABZ01038514.1 724 1.569 0.851 0.718 - - - - - - -
31. gpr143 ENSDARG00000034572 559 1.568 - - - - 0.754 - 0.814 - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
32. inpp5f ENSDARG00000061437 1228 1.567 - 0.721 - - - - 0.846 - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
33. arhgap29b ENSDARG00000017748 812 1.56 0.768 - - - - - 0.792 - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
34. smtla ENSDARG00000038191 42 1.553 - - - 0.725 - - 0.828 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
35. C2H7orf25 C2H7orf25 209 1.552 - - - - - 0.707 0.845 - -
36. luzp2 ENSDARG00000068247 80 1.539 - - 0.792 - 0.747 - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
37. slc2a12 ENSDARG00000036865, ENSDARG00000113590 148 1.537 - 0.723 - - - - 0.814 - - solute carrier family 2 (facilitated glucose transporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1513]
38. scxa ENSDARG00000035695 255 1.526 - - - 0.781 - 0.745 - - - scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
39. aak1 aak1 81 1.523 - 0.811 - 0.712 - - - - -
40. CR855996.2 ENSDARG00000104450 310 1.519 - 0.774 - - - - - - 0.745 ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
41. rnf41 ENSDARG00000036831, ENSDARG00000111636 872 1.508 0.727 - - - - - 0.781 - - ring finger protein 41 [Source:ZFIN;Acc:ZDB-GENE-040426-2920]
42. dvl3a ENSDARG00000015707 1132 1.504 - 0.763 - - - - 0.741 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
43. g2e3 ENSDARG00000001313 1485 1.49 0.741 0.749 - - - - - - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
44. wdr47a ENSDARG00000078136 522 1.48 - 0.743 - - - - 0.737 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
45. ercc6 ENSDARG00000075612 1175 1.472 - 0.728 - - - - 0.744 - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
46. sod3b ENSDARG00000079183 39 1.466 - 0.727 - - - - - - 0.739 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
47. si:dkey-20i20.2 ENSDARG00000071719 659 1.453 - 0.729 - - - - 0.724 - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
48. comtb ENSDARG00000025679, ENSDARG00000111678 1692 1.439 0.736 - - - - - 0.703 - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
49. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.431 - - - - 0.727 - - - 0.704 A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
50. tmem51a ENSDARG00000068575, ENSDARG00000114656 596 1.425 - 0.705 - - - - 0.720 - - transmembrane protein 51a [Source:ZFIN;Acc:ZDB-GENE-061103-481]
51. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - 1.000 - - - - - - -
52. xrra1 ENSDARG00000089578 18 1 - 1.000 - - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
53. parp3 ENSDARG00000003961 146 1 - 1.000 - - - - - - - poly (ADP-ribose) polymerase family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7435]
54. ints7 ENSDARG00000019300 273 0.979 - 0.979 - - - - - - - integrator complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-021220-6]
55. si:dkey-103d23.5 26 0.979 - 0.979 - - - - - - - si:dkey-103d23.5
56. ENSDARG00000086520 ENSDARG00000086520 26 0.978 - 0.978 - - - - - - -
57. zgc:174696 ENSDARG00000110658 67 0.978 - 0.978 - - - - - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
58. si:ch211-194e1.8 si:ch211-194e1.8 14 0.978 - 0.978 - - - - - - -
59. FBF1_1 FBF1_1 86 0.978 - 0.978 - - - - - - -
60. si:ch211-67e16.11 ENSDARG00000095580 635 0.976 0.976 - - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
61. CABZ01073654.1 CABZ01073654.1 16 0.975 0.975 - - - - - - - -
62. si:dkey-242h9.3 ENSDARG00000069189 83 0.974 0.974 - - - - - - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
63. slc16a6a ENSDARG00000102793 60 0.973 0.973 - - - - - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
64. C7 C7 81 0.973 0.973 - - - - - - - -
65. METTL15 ENSDARG00000089236 39 0.971 0.971 - - - - - - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
66. wu:fb68b01 wu:fb68b01 42 0.968 - 0.968 - - - - - - -
67. flt3 ENSDARG00000058503 32 0.967 0.967 - - - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
68. tbl2 ENSDARG00000043357 125 0.967 0.967 - - - - - - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
69. NAV1_1 NAV1_1 35 0.966 0.966 - - - - - - - -
70. ikbke ENSDARG00000070606, ENSDARG00000111682, ENSDARG00000111787 54 0.965 0.965 - - - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:ZFIN;Acc:ZDB-GENE-040718-251]
71. OVOL1 75 0.959 0.959 - - - - - - - - ovo-like zinc finger 1, transcript variant X1
72. si:dkey-4c15.13 ENSDARG00000095704 13 0.959 0.959 - - - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
73. si:dkey-4c15.5 si:dkey-4c15.5 36 0.959 0.959 - - - - - - - -
74. PPP1R16A ENSDARG00000076980 40 0.959 0.959 - - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
75. zgc:114037_3 17 0.959 0.959 - - - - - - - - zgc:114037
76. PATL2 PATL2 10 0.959 0.959 - - - - - - - -
77. si:dkey-27p18.3 ENSDARG00000092228 38 0.959 0.959 - - - - - - - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
78. si:dkey-56e5.2 si:dkey-56e5.2 14 0.959 0.959 - - - - - - - -
79. CU019646.1 ENSDARG00000117632 223 0.959 0.959 - - - - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
80. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.959 0.959 - - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
81. pag1 ENSDARG00000055875 21 0.959 0.959 - - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
82. si:dkey-176g1.6 si:dkey-176g1.6 5 0.959 0.959 - - - - - - - -
83. si:ch211-212i14.2 si:ch211-212i14.2 9 0.959 0.959 - - - - - - - -
84. racgap1 ENSDARG00000015460 38 0.959 0.959 - - - - - - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
85. foxi1 ENSDARG00000104566 176 0.959 0.959 - - - - - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
86. CLDN22 CLDN22 114 0.959 - 0.959 - - - - - - -
87. sstr3 ENSDARG00000014477 14 0.959 0.959 - - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
88. CABZ01023255.1 ENSDARG00000099984 13 0.958 - 0.958 - - - - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
89. znf668 ENSDARG00000025226, ENSDARG00000112533 177 0.958 - 0.958 - - - - - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
90. LRRC41 LRRC41 11 0.958 - 0.958 - - - - - - -
91. ldb2a ENSDARG00000019579 26 0.956 0.956 - - - - - - - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
92. LAMB3 LAMB3 31 0.954 0.954 - - - - - - - -
93. CABZ01074899.1 CABZ01074899.1 89 0.953 - 0.953 - - - - - - -
94. CABZ01060813.1 CABZ01060813.1 12 0.95 0.950 - - - - - - - -
95. cyb5r2 ENSDARG00000051925 304 0.95 0.950 - - - - - - - - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
96. lin7b ENSDARG00000037932 150 0.95 0.950 - - - - - - - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
97. mgme1 ENSDARG00000016656 173 0.949 - 0.949 - - - - - - - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
98. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.949 0.949 - - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
99. DLEU7 DLEU7 91 0.948 0.948 - - - - - - - -
100. crlf1a ENSDARG00000024365 222 0.948 0.948 - - - - - - - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]

There are 1217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA