Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-241b2.1

Gene Name Gene ID Reads Annotation
si:ch211-241b2.1 ENSDARG00000102950 526 si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]










Genes with expression patterns similar to si:ch211-241b2.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-241b2.1 ENSDARG00000102950 526 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
2. syvn1 ENSDARG00000017842 1815 1.656 - 0.932 - - - - 0.724 - - synovial apoptosis inhibitor 1, synoviolin [Source:ZFIN;Acc:ZDB-GENE-030131-7166]
3. zgc:174688 zgc:174688 170 1.632 - - - - - - 0.833 0.799 -
4. camk2d1 ENSDARG00000043010 669 1.619 - - - - - - 0.811 0.808 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
5. si:dkey-17e6.2 si:dkey-17e6.2 72 1.618 - - - 0.801 - - - 0.817 -
6. C20H6orf58_1 C20H6orf58_1 216 1.613 - 0.740 - - - - - 0.873 -
7. nrbf2 nrbf2 604 1.607 - - - 0.835 - - - 0.772 -
8. bag6l ENSDARG00000077531 1027 1.576 - 0.805 - 0.771 - - - - - BCL2 associated athanogene 6, like [Source:ZFIN;Acc:ZDB-GENE-060307-2]
9. irf2bpl ENSDARG00000004297 1861 1.554 - - - - - 0.806 - 0.748 - interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
10. CR388095.3 CR388095.3 2548 1.552 0.718 0.834 - - - - - - -
11. pex16 ENSDARG00000058202 486 1.546 - - 0.756 - - - - 0.790 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
12. CR790363.1 ENSDARG00000097364 145 1.537 - - - 0.765 - - - 0.772 -
13. atp2b1b ENSDARG00000007788 56 1.52 - - 0.728 0.792 - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
14. ctdspla ENSDARG00000071673 1447 1.519 - 0.748 - - - - - 0.771 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
15. adrbk2 1037 1.514 - 0.779 - 0.735 - - - - - adrenergic, beta, receptor kinase 2, transcript variant X1
16. d2hgdh ENSDARG00000060210 362 1.488 - - - 0.775 - - - - 0.713 D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
17. nfyal ENSDARG00000001621 521 1.478 - 0.744 - - - 0.734 - - - nuclear transcription factor Y, alpha, like [Source:ZFIN;Acc:ZDB-GENE-040718-491]
18. ches1 ENSDARG00000043553 96 1.476 0.751 - - 0.725 - - - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
19. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.469 - 0.715 - - 0.754 - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
20. htra1b ENSDARG00000014907 146 1.464 - - - 0.754 - - 0.710 - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
21. isoc1 ENSDARG00000060069 1621 1.459 - - - - - 0.701 - 0.758 - isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
22. SMC6 ENSDARG00000091821 165 1.459 - - - - 0.742 0.717 - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
23. zic5 ENSDARG00000016022 1034 1.447 - 0.738 - - - 0.709 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
24. fam43a ENSDARG00000043009 792 1.446 - 0.720 - - - 0.726 - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
25. TRIM35_10 TRIM35_10 484 1.445 0.700 0.745 - - - - - - -
26. ldb1a ENSDARG00000010137 3035 1.443 - 0.720 - - - 0.723 - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
27. waca ENSDARG00000012577 1794 1.436 - - - - - 0.708 - - 0.728 WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
28. HPS6 265 1.43 - - - 0.716 - - 0.714 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
29. rac3b ENSDARG00000020795 1523 1.43 - 0.720 - - - 0.710 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
30. nat15 ENSDARG00000061185 396 0.99 - 0.990 - - - - - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
31. CR391977.3 CR391977.3 76 0.989 - 0.989 - - - - - - -
32. CU467854.1 CU467854.1 228 0.988 - 0.988 - - - - - - -
33. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.961 - 0.961 - - - - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
34. GRK6 ENSDARG00000032157 1136 0.961 - 0.961 - - - - - - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
35. tmem238 tmem238 1403 0.952 - 0.952 - - - - - - -
36. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 0.945 - 0.945 - - - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
37. TXNDC15 ENSDARG00000110357 492 0.942 - 0.942 - - - - - - - thioredoxin domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-070615-36]
38. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 0.937 - 0.937 - - - - - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
39. mab21l1 ENSDARG00000102047 4665 0.934 - 0.934 - - - - - - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
40. crfb17 511 0.925 - 0.925 - - - - - - - cytokine receptor family member B17
41. rpf2 ENSDARG00000043960 2719 0.921 - - - - - - - 0.921 - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
42. acot11a ENSDARG00000058229 531 0.918 - 0.918 - - - - - - - acyl-CoA thioesterase 11a [Source:ZFIN;Acc:ZDB-GENE-050522-538]
43. ndufaf3 ENSDARG00000112931 743 0.916 - 0.916 - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-282]
44. sfxn1 ENSDARG00000019963 1689 0.907 - 0.907 - - - - - - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
45. heyl ENSDARG00000055798, ENSDARG00000112770 76 0.906 - - - - - - - 0.906 - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
46. TRPM4 TRPM4 60 0.904 - - - - - - 0.904 - -
47. ftr67 ENSDARG00000098820 611 0.903 - 0.903 - - - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
48. IQCG ENSDARG00000068678 77 0.903 - - - - - - - 0.903 - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
49. lmod1 lmod1 409 0.899 - 0.899 - - - - - - -
50. si:ch211-266d19.4 ENSDARG00000012642 1251 0.898 - - - - - - - 0.898 - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
51. zgc:111983 ENSDARG00000006588 671 0.897 - 0.897 - - - - - - - zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]
52. ccnb1 ENSDARG00000051923 3226 0.894 - 0.894 - - - - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
53. pcyt1ab ENSDARG00000004492 386 0.894 - - - - - - 0.894 - - phosphate cytidylyltransferase 1, choline, alpha b [Source:ZFIN;Acc:ZDB-GENE-050522-114]
54. cav2 ENSDARG00000052000 2516 0.893 - 0.893 - - - - - - - caveolin 2 [Source:ZFIN;Acc:ZDB-GENE-040625-164]
55. reep5 ENSDARG00000100742 1470 0.893 - 0.893 - - - - - - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
56. nhej1 ENSDARG00000058893 172 0.892 - - - - - - 0.892 - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
57. dctn4 ENSDARG00000023988 860 0.89 - 0.890 - - - - - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
58. kif5bb 1645 0.89 - - - - - - - 0.890 - kinesin family member 5B, b
59. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.889 - 0.889 - - - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
60. rybpb ENSDARG00000053459 1464 0.888 - - - - - 0.888 - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
61. lmbr1l ENSDARG00000004745 861 0.888 - 0.888 - - - - - - - limb development membrane protein 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9906]
62. galnt18b ENSDARG00000059438 115 0.885 - - - - - - 0.885 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b [Source:ZFIN;Acc:ZDB-GENE-091014-1]
63. syn2a ENSDARG00000045945 434 0.884 - - - - - - - 0.884 - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
64. SEMA5B SEMA5B 1316 0.884 - - - - - - - 0.884 -
65. tmem126a ENSDARG00000014506 1050 0.883 - 0.883 - - - - - - - transmembrane protein 126A [Source:ZFIN;Acc:ZDB-GENE-040426-1770]
66. bcl7ba ENSDARG00000111877 3696 0.882 - 0.882 - - - - - - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
67. sgcg ENSDARG00000038107 711 0.877 - - - - - - - 0.877 - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
68. prdm1b_1 ENSDARG00000098925 140 0.877 - - - - - - 0.877 - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
69. nucb1 ENSDARG00000054833 2009 0.877 - 0.877 - - - - - - - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
70. ddb1 ENSDARG00000074431 1054 0.874 - - - - - - - 0.874 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
71. ugt5b2 ENSDARG00000101495 512 0.873 - - - - - - - 0.873 - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
72. ANK1_1 ANK1_1 507 0.871 - - - - - - - 0.871 -
73. CYTH2 ENSDARG00000028800 2349 0.867 - 0.867 - - - - - - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
74. sars2 ENSDARG00000102736 206 0.866 - - - 0.866 - - - - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
75. trim16 ENSDARG00000010673 519 0.865 - 0.865 - - - - - - - tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
76. entpd6 ENSDARG00000008757, ENSDARG00000111982 1397 0.865 - 0.865 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-050417-412]
77. C20H6orf58 C20H6orf58 1105 0.864 - 0.864 - - - - - - -
78. APBB3 ENSDARG00000053771 654 0.863 - - - - - - - 0.863 - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
79. ERO1LB ERO1LB 1433 0.863 - - - - - - - 0.863 -
80. snai1a ENSDARG00000056995 1427 0.86 - 0.860 - - - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
81. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 0.857 - 0.857 - - - - - - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
82. ahctf1 ENSDARG00000077530 2315 0.857 - - - - - 0.857 - - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
83. GRB10 GRB10 1496 0.855 - - - - - - - 0.855 -
84. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.854 - 0.854 - - - - - - - fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
85. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.852 - - - 0.852 - - - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
86. mepce ENSDARG00000059461 703 0.848 - - - - - 0.848 - - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
87. umps ENSDARG00000012215 4564 0.848 - - - - - - - 0.848 - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
88. SLC41A2 SLC41A2 202 0.847 0.847 - - - - - - - -
89. NHSL2 ENSDARG00000089066 374 0.846 - - - - - - - 0.846 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
90. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 0.845 - 0.845 - - - - - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
91. fbln2 ENSDARG00000015156 1694 0.844 - 0.844 - - - - - - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
92. dnajc18 ENSDARG00000056005 8084 0.842 - - - - - - - 0.842 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
93. trappc5 ENSDARG00000026068 1350 0.841 - - - - - - - 0.841 - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
94. myhz1.2 ENSDARG00000067995 29117 0.841 - 0.841 - - - - - - - myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
95. dclk1a ENSDARG00000018856 177 0.84 - - - - - - - 0.840 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
96. ELMSAN1_1 ELMSAN1_1 1337 0.84 - 0.840 - - - - - - -
97. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 0.84 - 0.840 - - - - - - - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
98. abca12 ENSDARG00000074749 2712 0.838 - 0.838 - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
99. slc25a25a ENSDARG00000010572 1240 0.837 - 0.837 - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a [Source:ZFIN;Acc:ZDB-GENE-040426-2396]
100. bcap29 ENSDARG00000016231 299 0.836 - - - 0.836 - - - - - B cell receptor associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-050522-468]

There are 990 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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