Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-240l19.6

Gene Name Gene ID Reads Annotation
si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]










Genes with expression patterns similar to si:ch211-240l19.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
2. si:dkey-187i8.2 ENSDARG00000096624 8 1.998 1.000 - - - - - - - 0.998 si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
3. BX927362.1 ENSDARG00000097469 13 1.928 - - 0.928 - 1.000 - - - -
4. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.928 1.000 - 0.928 - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
5. ttr ENSDARG00000037191 11 1.876 1.000 - - - 0.876 - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
6. si:dkey-167i21.2 ENSDARG00000093886 10 1.867 - - 1.000 - - - - 0.867 - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
7. rargb ENSDARG00000054003 7 1.808 - - 0.826 - - - - - 0.982 retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
8. C5H9orf172 C5H9orf172 65 1.788 0.975 - - - 0.813 - - - -
9. CCSER1 ENSDARG00000075919 16 1.748 0.820 - 0.928 - - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
10. si:dkey-111e8.5 ENSDARG00000093960 28 1.724 1.000 - 0.724 - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
11. st6galnac1.2 ENSDARG00000043816 51 1.712 - - - 0.783 0.929 - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
12. baiap2l2 baiap2l2 30 1.615 - - 0.859 - - - - 0.756 -
13. opn4.1 ENSDARG00000007553 66 1.596 0.798 - 0.798 - - - - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
14. AHNAK2 AHNAK2 33 1.588 0.782 - - 0.806 - - - - -
15. GPR45 ENSDARG00000063357 57 1.518 0.805 - - - 0.713 - - - - G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]
16. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
17. CU633848.1 CU633848.1 4 1 - - - - - - - 1.000 -
18. mep1a.1 ENSDARG00000029747 4 1 - - - - - - - 1.000 - meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041001-209]
19. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
20. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
21. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
22. PLEKHS1_2 PLEKHS1_2 21 1 - - - - 1.000 - - - -
23. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - - - 1.000 -
24. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
25. EXT1_1 EXT1_1 3 1 - - - - - - - 1.000 -
26. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - - - 1.000 -
27. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
28. si:ch211-180a12.2 ENSDARG00000087857 2 1 - - - - - - - 1.000 - si:ch211-180a12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-236]
29. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
30. pnp4b ENSDARG00000029230 6 1 - - - - 1.000 - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
31. top3b ENSDARG00000027586 8 1 - - - - 1.000 - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
32. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
33. si:dkey-86e18.2 ENSDARG00000092758 0 1 - - - - - - - 1.000 - si:dkey-86e18.2 [Source:ZFIN;Acc:ZDB-GENE-041014-19]
34. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
35. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
36. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
37. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
38. urgcp ENSDARG00000036767 6 1 - - - - - - - 1.000 - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
39. IQGAP3 ENSDARG00000098650 5 1 - - - - 1.000 - - - - IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
40. C18H15orf48 C18H15orf48 3 1 - - - - - - - 1.000 -
41. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - 1.000 - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
42. trim35-30 ENSDARG00000042396, ENSDARG00000114099 2 1 - - - - - - - 1.000 - tripartite motif containing 35-30 [Source:ZFIN;Acc:ZDB-GENE-060503-557]
43. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
44. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
45. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
46. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
47. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
48. si:dkey-126h10.2 si:dkey-126h10.2 3 1 - - - - 1.000 - - - -
49. themis ENSDARG00000010619 5 1 - - - - - - - 1.000 - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
50. si:dkey-78a14.5 14 1 - - - - 1.000 - - - - si:dkey-78a14.5, transcript variant X2
51. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
52. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
53. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
54. si:dkey-56m15.6 ENSDARG00000093461 1 1 - - - - - - - 1.000 - si:dkey-56m15.6 [Source:ZFIN;Acc:ZDB-GENE-110914-102]
55. si:ch211-71m22.2 si:ch211-71m22.2 11 1 - - - - - - - 1.000 -
56. TSPEAR TSPEAR 9 1 - - - - - - - 1.000 -
57. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
58. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
59. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
60. CR936540.2 CR936540.2 4 1 - - - - - - - 1.000 -
61. si:dkey-108f8.7 si:dkey-108f8.7 0 1 - - - - - - - 1.000 -
62. si:ch211-13b16.1 si:ch211-13b16.1 1 1 - - - - - - - 1.000 -
63. C2 C2 5 1 - - - - - - - 1.000 -
64. BX324215.3 BX324215.3 12 1 - - - - - - - 1.000 -
65. SYNGAP1 SYNGAP1 4 1 - - - - - - - 1.000 -
66. CU571170.2 CU571170.2 1 1 - - - - - - - 1.000 -
67. angptl1 angptl1 82 1 1.000 - - - - - - - -
68. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
69. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - 1.000 -
70. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
71. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 1 - - - - - - - 1.000 - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]
72. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - - - - 1.000 -
73. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
74. TNRC6C TNRC6C 5 1 - - - - - - - 1.000 -
75. cga ENSDARG00000040479 3 1 - - - - - - - 1.000 - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
76. hmha1 hmha1 58 1 1.000 - - - - - - - -
77. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - - - - - - - 1.000 -
78. btr22 ENSDARG00000100539 137 1 - - - - 1.000 - - - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
79. CR293498.1 ENSDARG00000097990 4 1 - - - - - - - 1.000 -
80. CMA1_7 CMA1_7 1 1 - - - - - - - 1.000 -
81. si:dkey-253d23.1 si:dkey-253d23.1 2 1 - - 1.000 - - - - - -
82. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
83. FAT1 FAT1 689 1 1.000 - - - - - - - -
84. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
85. AFAP1L1 AFAP1L1 1 1 - - - - - - - 1.000 -
86. 5S_rRNA_11 5S_rRNA_11 1 1 - - - - - - - 1.000 -
87. dnaaf2 ENSDARG00000103132 24 1 1.000 - - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
88. si:dkey-43b14.7 si:dkey-43b14.7 0 1 - - - - - - - 1.000 -
89. si:dkey-24l11.3 si:dkey-24l11.3 9 1 1.000 - - - - - - - -
90. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
91. si:ch211-157c18.3 si:ch211-157c18.3 8 1 - - - - - - - 1.000 -
92. CR457462.1 CR457462.1 11 1 - - - - 1.000 - - - -
93. cox5aa ENSDARG00000088383 21 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
94. col10a1 col10a1 19 1 - - - - 1.000 - - - -
95. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
96. CABZ01116714.1 CABZ01116714.1 4 1 - - - - 1.000 - - - -
97. hsd11b2 ENSDARG00000001975 245 1 1.000 - - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
98. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
99. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
100. kcnf1b ENSDARG00000027285 2 1 - - - - - - - 1.000 - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]

There are 489 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA