Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-240l19.6

Gene Name Gene ID Reads Annotation
si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]










Genes with expression patterns similar to si:ch211-240l19.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
2. si:dkey-187i8.2 ENSDARG00000096624 8 1.998 1.000 - - - - - - - 0.998 si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
3. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.928 1.000 - 0.928 - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
4. BX927362.1 ENSDARG00000097469 13 1.928 - - 0.928 - 1.000 - - - -
5. ttr ENSDARG00000037191 11 1.876 1.000 - - - 0.876 - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
6. si:dkey-167i21.2 ENSDARG00000093886 10 1.867 - - 1.000 - - - - 0.867 - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
7. rargb ENSDARG00000054003 7 1.808 - - 0.826 - - - - - 0.982 retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
8. C5H9orf172 C5H9orf172 65 1.788 0.975 - - - 0.813 - - - -
9. CCSER1 ENSDARG00000075919 16 1.748 0.820 - 0.928 - - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
10. si:dkey-111e8.5 ENSDARG00000093960 28 1.724 1.000 - 0.724 - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
11. st6galnac1.2 ENSDARG00000043816 51 1.712 - - - 0.783 0.929 - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
12. baiap2l2 baiap2l2 30 1.615 - - 0.859 - - - - 0.756 -
13. opn4.1 ENSDARG00000007553 66 1.596 0.798 - 0.798 - - - - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
14. AHNAK2 AHNAK2 33 1.588 0.782 - - 0.806 - - - - -
15. GPR45 ENSDARG00000063357 57 1.518 0.805 - - - 0.713 - - - - G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]
16. ncf2 ENSDARG00000005821 28 1 - - - - - - - 1.000 - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
17. GRID1 GRID1 51 1 1.000 - - - - - - - -
18. btr22 ENSDARG00000100539 137 1 - - - - 1.000 - - - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
19. si:ch211-71m22.2 si:ch211-71m22.2 11 1 - - - - - - - 1.000 -
20. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
21. si:ch211-157c18.3 si:ch211-157c18.3 8 1 - - - - - - - 1.000 -
22. si:dkey-126h10.2 si:dkey-126h10.2 3 1 - - - - 1.000 - - - -
23. GPC6_1 GPC6_1 34 1 1.000 - - - - - - - -
24. eef1a2 ENSDARG00000006838, ENSDARG00000111569 2 1 - - - - - - - 1.000 - eukaryotic translation elongation factor 1 alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040718-64]
25. pdcb ENSDARG00000017634 10 1 - - - - - - - 1.000 - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
26. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
27. urgcp ENSDARG00000036767 6 1 - - - - - - - 1.000 - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
28. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
29. CU633848.1 CU633848.1 4 1 - - - - - - - 1.000 -
30. si:dkey-253d23.1 si:dkey-253d23.1 2 1 - - 1.000 - - - - - -
31. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - - - - - - 1.000 -
32. CR293498.1 ENSDARG00000097990 4 1 - - - - - - - 1.000 -
33. CU896563.2 CU896563.2 2 1 - - - - - - - 1.000 -
34. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
35. calcr ENSDARG00000028845, ENSDARG00000109526 17 1 1.000 - - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
36. ATP6V1C2 ENSDARG00000070440 2 1 - - - - - - - 1.000 - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
37. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - - - 1.000 -
38. top3b ENSDARG00000027586 8 1 - - - - 1.000 - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
39. si:dkey-242e21.3 ENSDARG00000075723 77 1 1.000 - - - - - - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
40. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
41. BX649292.1 ENSDARG00000092686 1 1 - - - - - - - 1.000 -
42. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - 1.000 - - - -
43. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
44. scpp5 ENSDARG00000078622 15 1 - - - - - - - 1.000 - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
45. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
46. ATP13A5 ATP13A5 13 1 1.000 - - - - - - - -
47. TNRC6C TNRC6C 5 1 - - - - - - - 1.000 -
48. oxtrl ENSDARG00000044175 10 1 - - - - - - - 1.000 - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
49. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
50. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
51. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
52. si:dkey-78a14.5 14 1 - - - - 1.000 - - - - si:dkey-78a14.5, transcript variant X2
53. rnf217 ENSDARG00000060944 10 1 - - - - 1.000 - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
54. angptl1 angptl1 82 1 1.000 - - - - - - - -
55. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
56. cox5aa ENSDARG00000088383 21 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
57. si:dkey-24l11.3 si:dkey-24l11.3 9 1 1.000 - - - - - - - -
58. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - 1.000 - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
59. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - 1.000 -
60. DPYSL2 DPYSL2 4 1 1.000 - - - - - - - -
61. FNDC3B FNDC3B 2 1 - - 1.000 - - - - - -
62. dio2 ENSDARG00000094857 17 1 - - - - - - - 1.000 - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
63. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
64. dnaaf2 ENSDARG00000103132 24 1 1.000 - - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
65. si:dkey-163m14.6 5 1 - - - - 1.000 - - - - si:dkey-163m14.6
66. 5S_rRNA_11 5S_rRNA_11 1 1 - - - - - - - 1.000 -
67. EXT1_1 EXT1_1 3 1 - - - - - - - 1.000 -
68. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
69. si:dkey-188k17.2 7 1 1.000 - - - - - - - - si:dkey-188k17.2
70. smtlb ENSDARG00000017251 7 1 - - - - - - - 1.000 - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
71. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
72. C2 C2 5 1 - - - - - - - 1.000 -
73. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
74. FAT1 FAT1 689 1 1.000 - - - - - - - -
75. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
76. si:dkey-108f8.7 si:dkey-108f8.7 0 1 - - - - - - - 1.000 -
77. CR936540.2 CR936540.2 4 1 - - - - - - - 1.000 -
78. MUC5AC_2 MUC5AC_2 5 1 - - - - - - - 1.000 -
79. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
80. ciita ENSDARG00000090851 5 1 - - - - 1.000 - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
81. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - - - - - - - 1.000 -
82. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
83. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
84. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
85. TSPEAR TSPEAR 9 1 - - - - - - - 1.000 -
86. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
87. CU571170.2 CU571170.2 1 1 - - - - - - - 1.000 -
88. admp ENSDARG00000025372 1 1 - - - - - - - 1.000 - anti-dorsalizing morphogenic protein [Source:ZFIN;Acc:ZDB-GENE-011214-1]
89. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
90. AFAP1L1 AFAP1L1 1 1 - - - - - - - 1.000 -
91. BX465205.1 ENSDARG00000097139 64 1 1.000 - - - - - - - -
92. myo15ab ENSDARG00000078474 0 1 - - - - - - - 1.000 - myosin XVAb [Source:ZFIN;Acc:ZDB-GENE-090312-149]
93. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - - - 1.000 - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
94. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
95. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
96. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
97. BX927122.3 BX927122.3 19 1 - - - - - - - 1.000 -
98. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
99. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
100. CMA1_7 CMA1_7 1 1 - - - - - - - 1.000 -

There are 489 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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