Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-240g9.1

Gene Name Gene ID Reads Annotation
si:ch211-240g9.1 36 si:ch211-240g9.1










Genes with expression patterns similar to si:ch211-240g9.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-240g9.1 36 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-240g9.1
2. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.674 - 0.864 - - - 0.980 0.830 - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
3. C5H9orf172 C5H9orf172 65 2.293 0.714 - - - - 0.807 0.772 - -
4. si:ch211-106n13.3 ENSDARG00000052633 3 2 - 1.000 - - - - 1.000 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
5. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.986 - - - - - 0.986 1.000 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
6. CLDN20 26 1.983 - - - - - 0.983 1.000 - - claudin 20, transcript variant X2
7. arf3a ENSDARG00000070539 29 1.979 - - - - - 0.979 1.000 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
8. zdhhc12b ENSDARG00000052787 43 1.975 - - - - - 0.975 1.000 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
9. mcph1 ENSDARG00000058372 51 1.965 - - - - - 0.965 1.000 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
10. SLC9B1 SLC9B1 137 1.95 - 1.000 - - - 0.950 - - -
11. si:dkey-10f21.16 si:dkey-10f21.16 252 1.919 - - - - - 0.919 1.000 - -
12. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.898 - - - - - 0.898 1.000 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
13. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.854 - 0.924 - - - 0.930 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
14. bicc2 ENSDARG00000076557 77 1.843 - 1.000 - - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
15. diaph2 ENSDARG00000076060 26 1.83 0.830 1.000 - - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
16. VWA7 ENSDARG00000061462 816 1.814 - - - - - 0.967 0.847 - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
17. camkvl ENSDARG00000057000 40 1.797 - - - - - 0.919 0.878 - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
18. irgf1 ENSDARG00000070774 7 1.787 - - - - - 0.984 - - 0.803 immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
19. BX004785.2 ENSDARG00000093487 10 1.784 - - - - 0.784 - 1.000 - -
20. FAM163A ENSDARG00000093021 86 1.777 - 0.891 - - - 0.886 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
21. fem1a ENSDARG00000067966 11 1.777 - 1.000 - - 0.777 - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
22. CCDC74B CCDC74B 8 1.767 - - - - - - 1.000 - 0.767
23. sox2 ENSDARG00000070913 2763 1.756 - 0.793 - - - 0.963 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
24. GRIN2B GRIN2B 140 1.745 - - - - - 0.979 0.766 - -
25. B4GALNT1 B4GALNT1 352 1.74 - 0.884 - - - 0.856 - - -
26. bon bon 20 1.74 0.740 - - - - - 1.000 - -
27. syt13 ENSDARG00000012306 298 1.736 - 0.765 - - - 0.971 - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
28. MAP6 MAP6 643 1.734 - 0.864 - - - 0.870 - - -
29. si:dkey-22o22.2 ENSDARG00000102445 149 1.727 - - - - - 0.979 0.748 - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
30. cnrip1a ENSDARG00000091683 1491 1.722 - 0.812 - - - 0.910 - - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
31. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.716 0.740 - - - - 0.976 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
32. CU463790.1 CU463790.1 60 1.712 0.740 - - - - 0.972 - - -
33. shhb ENSDARG00000038867 338 1.711 - 0.944 - - - - 0.767 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
34. nrn1b ENSDARG00000042656 44 1.706 - - - - - 0.988 0.718 - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
35. si:ch211-213i16.4 8 1.704 - 0.704 - - - - 1.000 - - si:ch211-213i16.4, transcript variant X1
36. pappab ENSDARG00000059858 11 1.704 - 0.704 - - - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
37. dusp3b ENSDARG00000060130 3 1.704 - 0.704 - - - - 1.000 - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
38. si:ch73-21g5.7 ENSDARG00000093156 9412 1.697 - 0.851 - - - 0.846 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
39. sgms2 57 1.695 - 0.704 - - - 0.991 - - - sphingomyelin synthase 2, transcript variant X1
40. SSBP2 ENSDARG00000099727 22 1.694 - 0.704 - - - 0.990 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
41. atat1 ENSDARG00000004472 700 1.693 - 0.704 - - - 0.989 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
42. PPFIA3 ENSDARG00000077053 310 1.692 - 0.704 - - - 0.988 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
43. XKR7 ENSDARG00000026333 175 1.69 - 0.704 - - - 0.986 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
44. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.688 - 0.704 - - - 0.984 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
45. mapk8ip2 ENSDARG00000063157 467 1.685 - 0.746 - - - 0.939 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
46. thsd7ba ENSDARG00000095022 231 1.68 - 0.804 - - - 0.876 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
47. KCNIP4 ENSDARG00000088100 86 1.68 - 0.704 - - - 0.976 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
48. atp2b3b ENSDARG00000023445 1424 1.672 - 0.913 - - - 0.759 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
49. hs3st3l ENSDARG00000059903 184 1.67 - 0.780 - - - 0.890 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
50. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.669 0.703 - - - - 0.966 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
51. sprb ENSDARG00000058553 1694 1.668 - 0.919 - - - 0.749 - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
52. vsnl1a ENSDARG00000023228 1584 1.666 - 0.944 - - - 0.722 - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
53. mapk12b ENSDARG00000006409 2246 1.665 - 0.825 - - - 0.840 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
54. si:ch211-243a20.3 ENSDARG00000092240 151 1.662 0.716 0.946 - - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
55. cpeb1a ENSDARG00000045932 81 1.659 - 0.867 - - - 0.792 - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
56. f2rl2 ENSDARG00000090524 37 1.656 - - - - - 0.947 0.709 - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
57. zgc:174697 zgc:174697 128 1.653 - 0.704 - - - 0.949 - - -
58. pcsk1nl ENSDARG00000076170 1232 1.644 - 0.881 - - - 0.763 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
59. ttc9b ENSDARG00000068421 251 1.642 - 0.867 - - - 0.775 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
60. syt11a ENSDARG00000057913 1145 1.638 - 0.854 - - - 0.784 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
61. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.631 - 0.704 - - - 0.927 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
62. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.63 - 0.800 - - - 0.830 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
63. fgd 377 1.618 - - - - - 0.778 0.840 - - faciogenital dysplasia
64. TUSC5 TUSC5 1436 1.614 - 0.871 - - - 0.743 - - -
65. st18 663 1.612 - 0.827 - - - 0.785 - - - suppression of tumorigenicity 18, zinc finger
66. neurod neurod 1189 1.608 - 0.860 - - - - 0.748 - -
67. prpf31 ENSDARG00000095904 526 1.608 - 0.707 - - - 0.901 - - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
68. stap2a ENSDARG00000092810 591 1.607 - - - - - 0.854 0.753 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
69. stmn2a ENSDARG00000033234 2272 1.604 - 0.814 - - - 0.790 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
70. doc2d ENSDARG00000079962 76 1.601 0.740 - - - - 0.861 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
71. CDR2 CDR2 384 1.6 - - - - - 0.874 0.726 - -
72. bsk146 ENSDARG00000099069 274 1.598 - 0.704 - - - 0.894 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
73. CABZ01038313.1 CABZ01038313.1 79 1.596 - 0.704 - - - 0.892 - - -
74. atp1b4 ENSDARG00000053262 1337 1.595 - 0.801 - - - 0.794 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
75. CABZ01065506.1 CABZ01065506.1 204 1.594 - 0.704 - - - 0.890 - - -
76. syt9a ENSDARG00000003994 298 1.585 - 0.704 - - - 0.881 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
77. TOP1 ENSDARG00000086775 48 1.581 - 0.795 - - - - - - 0.786 DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
78. nme6 ENSDARG00000016138 207 1.574 - - - - - 0.808 0.766 - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
79. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.564 - 0.786 - - - 0.778 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
80. cacna2d3 ENSDARG00000078760 211 1.561 - 0.749 - - - 0.812 - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
81. CABZ01016567.1 CABZ01016567.1 73 1.556 - - - - 0.708 0.848 - - -
82. nptx1l ENSDARG00000074671 569 1.55 - 0.757 - - - 0.793 - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
83. NPPC ENSDARG00000068126 45 1.55 - - - - 0.711 - 0.839 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
84. SV2B SV2B 208 1.548 - 0.846 - - - 0.702 - - -
85. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 1.548 0.754 - - - - 0.794 - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
86. CR847906.1 ENSDARG00000099493 88 1.547 - 0.704 - - - 0.843 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
87. scdb ENSDARG00000030265 271 1.546 - 0.823 - - - 0.723 - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
88. RGS9BP ENSDARG00000086756 65 1.544 - 0.704 - - - 0.840 - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
89. adora1 adora1 149 1.543 - 0.704 - - - - 0.839 - -
90. si:dkey-21o19.6 si:dkey-21o19.6 18 1.536 - 0.704 - - - 0.832 - - -
91. NRSN2 NRSN2 57 1.531 - 0.704 - - - - 0.827 - -
92. scin ENSDARG00000010728, ENSDARG00000111092 437 1.524 - 0.704 - - - 0.820 - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
93. PLA2G3 ENSDARG00000008948 23 1.506 - - - - 0.764 - 0.742 - - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
94. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.502 - 0.744 - - - 0.758 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
95. nrcam nrcam 397 1.489 - 0.704 - - - 0.785 - - -
96. PGBD4_5 PGBD4_5 16 1.484 - 0.704 - - - - - - 0.780
97. syt2a ENSDARG00000025206 681 1.479 - 0.704 - - - 0.775 - - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
98. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.476 - 0.704 - - - 0.772 - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
99. gdf10a ENSDARG00000095378 12 1.471 - 0.704 - - - - - - 0.767 growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
100. HDX ENSDARG00000079382 513 1.469 - 0.703 - - - - 0.766 - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]

There are 1905 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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