Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-239m17.2

Gene Name Gene ID Reads Annotation
si:ch211-239m17.2 si:ch211-239m17.2 1










Genes with expression patterns similar to si:ch211-239m17.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cyp2j20 ENSDARG00000094057 44 2 - 1.000 - - - - - - 1.000 cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
2. si:dkey-285e18.6 ENSDARG00000098144 1 2 - 1.000 - - - - - - 1.000 si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
3. zgc:113307 ENSDARG00000044894 17 2 - 1.000 - - - - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
4. si:ch211-239m17.2 si:ch211-239m17.2 1 2 - 1.000 - - - - - - 1.000
5. CR391998.1 ENSDARG00000091817 15 2 - 1.000 - - - - - - 1.000 putative protein TPRXL [Source:NCBI gene;Acc:101882255]
6. AGO3 AGO3 12 1.881 - 1.000 - - - - - - 0.881
7. irf1b ENSDARG00000043249 30 1.714 - 0.960 - - - - - - 0.754 interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
8. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
9. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
10. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - - - - - 1.000 si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
11. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
12. prkar2ab ENSDARG00000009477 2 1 - - - - - - - - 1.000 protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
13. faah2b ENSDARG00000054786, ENSDARG00000112726 10 1 - - - - - - - - 1.000 fatty acid amide hydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061027-358]
14. zgc:165423 ENSDARG00000052905 1 1 - - - - - - - - 1.000 zgc:165423 [Source:ZFIN;Acc:ZDB-GENE-070720-11]
15. her3 ENSDARG00000076857 131 1 - 1.000 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
16. SLC6A11 SLC6A11 0 1 - - - - - - - - 1.000
17. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
18. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
19. syt9b ENSDARG00000029239 31 1 - 1.000 - - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
20. tecrl2 tecrl2 11 1 - 1.000 - - - - - - -
21. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
22. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
23. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
24. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
25. sst2 ENSDARG00000014190 617 1 - 1.000 - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
26. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
27. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - - - - 1.000 si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
28. fhit ENSDARG00000078195 0 1 - - - - - - - - 1.000 fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
29. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
30. PEG3_16 PEG3_16 0 1 - - - - - - - - 1.000
31. USP43 USP43 14 1 - 1.000 - - - - - - -
32. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
33. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - 1.000 - - - - - - -
34. PLCXD1_3 PLCXD1_3 35 1 - 1.000 - - - - - - -
35. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
36. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
37. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
38. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 - 1.000 - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
39. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - - - - 1.000
40. cpeb1b ENSDARG00000008454 37 1 - 1.000 - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
41. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
42. KCNS3 KCNS3 82 1 - 1.000 - - - - - - -
43. foxb2 ENSDARG00000037475 1 1 - - - - - - - - 1.000 forkhead box B2 [Source:ZFIN;Acc:ZDB-GENE-081104-320]
44. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
45. abcc6a ENSDARG00000016750 10 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
46. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
47. U6_20 U6_20 0 1 - 1.000 - - - - - - -
48. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - 1.000 - - - - - - -
49. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - - - 1.000 odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
50. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
51. U6_32 U6_32 0 1 - 1.000 - - - - - - -
52. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
53. CT033818.1 CT033818.1 0 1 - - - - - - - - 1.000
54. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
55. zgc:174311 zgc:174311 3 1 - - - - - - - - 1.000
56. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
57. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
58. si:ch211-286l10.2 si:ch211-286l10.2 1 1 - - - - - - - - 1.000
59. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
60. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
61. rereb ENSDARG00000075670 136 1 - 1.000 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
62. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
63. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
64. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
65. CABZ01034089.2 CABZ01034089.2 0 1 - - - - - - - - 1.000
66. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
67. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
68. cdh10 cdh10 38 1 - 1.000 - - - - - - -
69. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
70. SRCIN1 SRCIN1 5 1 - 1.000 - - - - - - -
71. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
72. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
73. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - 1.000 - - - - - - -
74. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
75. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
76. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - - - - - - 1.000
77. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
78. armc2 ENSDARG00000022660 3 1 - - - - - - - - 1.000 armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
79. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - - - 1.000 RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
80. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
81. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
82. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
83. CU570987.1 CU570987.1 7 1 - 1.000 - - - - - - -
84. rbfox3l rbfox3l 34 1 - 1.000 - - - - - - -
85. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
86. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
87. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
88. camk1db ENSDARG00000017446 47 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
89. IMPG2_1 IMPG2_1 2 1 - - - - - - - - 1.000
90. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
91. ptprub_1 ENSDARG00000101081 0 1 - - - - - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
92. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
93. ptchd1 ENSDARG00000018066 3 1 - - - - - - - - 1.000 patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
94. AL935296.1 AL935296.1 4 1 - - - - - - - - 1.000
95. FAM131A ENSDARG00000077022 3 1 - - - - - - - - 1.000 family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
96. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - - - 1.000
97. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
98. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
99. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
100. tekt1 ENSDARG00000101331 27 1 - 1.000 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]

There are 503 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA