Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-239f4.4

Gene Name Gene ID Reads Annotation
si:ch211-239f4.4 si:ch211-239f4.4 12










Genes with expression patterns similar to si:ch211-239f4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-239f4.4 si:ch211-239f4.4 12 6 1.000 - - - 1.000 1.000 1.000 1.000 1.000
2. ttll2 ENSDARG00000077853 9 2.534 - - - - 0.843 0.886 0.805 - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
3. wdr27_1 ENSDARG00000053386 1 1.805 1.000 - - - - - 0.805 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
4. nfixb ENSDARG00000061836 7 1.805 1.000 - - - - - 0.805 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
5. CABZ01085626.1 ENSDARG00000117294 8 1.805 1.000 - - - - - 0.805 - -
6. dnah7 ENSDARG00000060165 21 1.805 1.000 - - - - - 0.805 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
7. EMB ENSDARG00000059485 35 1.802 1.000 - - - - - 0.802 - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
8. CACNA2D1_1 ENSDARG00000073752 2 1.8 1.000 - - - 0.800 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
9. si:dkey-40j3.3 ENSDARG00000103597 5 1.8 1.000 - - - 0.800 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
10. PLD1 PLD1 158 1.784 1.000 - - - - 0.784 - - -
11. si:ch211-213a13.11 si:ch211-213a13.11 9 1.771 - - - - - 0.897 - 0.874 -
12. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1.73 1.000 - - - - - 0.730 - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
13. crispld1a ENSDARG00000077275 7 1.724 1.000 - - - - - 0.724 - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
14. pcgf5a ENSDARG00000071007, ENSDARG00000113711, ENSDARG00000114273 22 1.721 - - - - - - 0.767 0.954 - polycomb group ring finger 5a [Source:ZFIN;Acc:ZDB-GENE-080723-33]
15. sycp2 ENSDARG00000088950 3 1.718 1.000 - - - - - - 0.718 - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
16. immp1l ENSDARG00000045935 175 1.713 0.820 - - - - 0.893 - - - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
17. gria2b ENSDARG00000052765 188 1.712 1.000 - - - 0.712 - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
18. si:ch211-207m11.3 si:ch211-207m11.3 401 1.703 0.906 - - - - 0.797 - - -
19. BX649490.1 ENSDARG00000091718 7 1.691 - - - - - 0.886 0.805 - - titin-like [Source:NCBI gene;Acc:101883412]
20. CHCHD5 ENSDARG00000091754 35 1.687 - - - - 0.852 - 0.835 - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
21. ENSDARG00000078787 ENSDARG00000078787 97 1.678 - - - - - 0.875 - - 0.803
22. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.677 0.835 - - - - - 0.842 - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
23. EHD2 EHD2 23 1.676 - - - - 0.845 0.831 - - -
24. gnb5b ENSDARG00000055377 98 1.671 0.758 - - - - 0.913 - - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
25. anpepa ENSDARG00000041083, ENSDARG00000111591 5 1.656 - - - - - - - 0.954 0.702 alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
26. zgc:171779 ENSDARG00000016908 26 1.655 - - - - 0.769 0.886 - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
27. PEG3_10 PEG3_10 45 1.65 0.764 - - - - 0.886 - - -
28. si:dkey-176f19.7 ENSDARG00000103348 10 1.646 - - - - 0.841 - 0.805 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
29. FMNL1 FMNL1 7 1.638 - - - - 0.800 0.838 - - -
30. zgc:172014 ENSDARG00000101775 3 1.605 - - - - 0.800 - 0.805 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
31. si:dkey-216e24.5 si:dkey-216e24.5 1 1.605 - - - - 0.800 - 0.805 - -
32. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.592 - - - - - 0.784 0.808 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
33. atp8b3 ENSDARG00000042285 31 1.578 - - - - - - 0.785 0.793 - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
34. si:dkey-190g11.3 ENSDARG00000025914 49 1.557 0.821 - - - - 0.736 - - - si:dkey-190g11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-341]
35. FAM83F FAM83F 8 1.54 - - - - 0.764 - - - 0.776
36. STPG2 ENSDARG00000061060 16 1.528 0.764 - - - - - 0.764 - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
37. hoxc5a ENSDARG00000070340 436 1.526 - - - - - 0.734 - - 0.792 homeobox C5a [Source:ZFIN;Acc:ZDB-GENE-980526-533]
38. si:ch73-91k6.1 18 1.524 - - - - 0.758 - - 0.766 - si:ch73-91k6.1
39. MEX3C 476 1.505 0.754 - - - - - 0.751 - - mex-3 RNA binding family member C
40. si:ch211-197g15.5 si:ch211-197g15.5 10 1.502 - - - - 0.800 - - - 0.702
41. SCARNA13 SCARNA13 122 1.46 0.739 - - - - - 0.721 - -
42. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
43. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
44. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
45. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
46. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
47. rhbdd3 ENSDARG00000079816 2 1 1.000 - - - - - - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
48. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
49. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
50. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
51. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
52. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
53. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
54. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
55. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 1.000 - - - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
56. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
57. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
58. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
59. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
60. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
61. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
62. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
63. efemp2b_1 ENSDARG00000020811 77 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
64. si:ch211-190k17.31 si:ch211-190k17.31 29 1 1.000 - - - - - - - -
65. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
66. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
67. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
68. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
69. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
70. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
71. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
72. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
73. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
74. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
75. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
76. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
77. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
78. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
79. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]
80. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
81. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
82. FKBPL ENSDARG00000095322 82 1 1.000 - - - - - - - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
83. wnt5a ENSDARG00000104973 21 1 1.000 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
84. xkr6 xkr6 286 1 1.000 - - - - - - - -
85. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
86. gpr19 ENSDARG00000102226 17 1 1.000 - - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
87. si:ch211-284d12.1 si:ch211-284d12.1 1 1 1.000 - - - - - - - -
88. isg15 ENSDARG00000086374 8 1 1.000 - - - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
89. GPR64 GPR64 58 1 1.000 - - - - - - - -
90. fstl5 ENSDARG00000040198 213 1 1.000 - - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
91. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
92. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
93. CABZ01072254.1 ENSDARG00000076111 4 1 1.000 - - - - - - - - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
94. pcdh1gb9 ENSDARG00000088475 71 1 1.000 - - - - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
95. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
96. CCSAP CCSAP 147 1 1.000 - - - - - - - -
97. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
98. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
99. itprip ENSDARG00000015576 62 1 1.000 - - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
100. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 1.000 - - - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]

There are 1060 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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