Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-238n5.4

Gene Name Gene ID Reads Annotation
si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]










Genes with expression patterns similar to si:ch211-238n5.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
2. CR407594.2 CR407594.2 145 1.848 0.926 - - - - - 0.922 - -
3. TEAD1 TEAD1 43 1.752 - 0.966 - - - 0.786 - - -
4. CLSTN2 ENSDARG00000060637 41 1.742 - - - - - 0.865 0.877 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
5. chek1 ENSDARG00000104765 1029 1.705 - 0.865 - - - - 0.840 - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
6. trpm4 trpm4 501 1.689 - 0.873 - - - 0.816 - - -
7. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 1.67 - 0.970 - - - - 0.700 - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
8. gpn2 ENSDARG00000103127 304 1.655 - - - - - 0.769 0.886 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
9. igfbp1b ENSDARG00000038666 163 1.632 - 0.890 - - - - 0.742 - - insulin-like growth factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081210-3]
10. CT485993.2 CT485993.2 1419 1.628 - 0.886 - - - - 0.742 - -
11. ZNF362 ZNF362 638 1.623 - - - - - 0.859 0.764 - -
12. SLC7A8 SLC7A8 25 1.614 0.765 - - - - 0.849 - - -
13. si:dkeyp-89c11.3 si:dkeyp-89c11.3 343 1.613 - 0.884 - - - - 0.729 - -
14. sfrp1b ENSDARG00000057678, ENSDARG00000115373 95 1.609 - 0.832 - - - 0.777 - - - secreted frizzled-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-061103-1]
15. PKN2 ENSDARG00000101293 358 1.606 - - - - - 0.758 0.848 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
16. armc1 ENSDARG00000013861 175 1.603 - 0.848 - - - 0.755 - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
17. myo1f ENSDARG00000078734 100 1.599 - - - - - 0.830 0.769 - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
18. si:ch211-113e8.10 ENSDARG00000079631 498 1.599 0.734 0.865 - - - - - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
19. ADAMTS16 ENSDARG00000074646 277 1.596 0.760 - - - - - 0.836 - - ADAM metallopeptidase with thrombospondin type 1 motif, 16 [Source:ZFIN;Acc:ZDB-GENE-130530-760]
20. rnf150a ENSDARG00000024827 1903 1.59 - 0.752 - - - - 0.838 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
21. nr0b1 ENSDARG00000056541 35 1.589 - - - - - 0.820 0.769 - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
22. fam46a fam46a 92 1.585 - - - - - - 0.844 0.741 -
23. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1.585 0.765 - - - - 0.820 - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
24. zgc:101664 ENSDARG00000035700 530 1.573 - 0.803 - - - - 0.770 - - zgc:101664 [Source:ZFIN;Acc:ZDB-GENE-041010-187]
25. mitd1 ENSDARG00000044766 182 1.564 0.701 - - - - - 0.863 - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
26. dlx2a ENSDARG00000079964 1253 1.555 - 0.791 - - - - 0.764 - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
27. XCR1_1 XCR1_1 187 1.551 - - - - - 0.754 0.797 - -
28. ccdc85ca ENSDARG00000005232 3218 1.55 - 0.715 - - - - 0.835 - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
29. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1.543 0.765 - - - - 0.778 - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
30. sik2b ENSDARG00000062315 1303 1.54 - 0.782 - - - 0.758 - - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
31. alg2 ENSDARG00000070399 772 1.538 0.720 - - - - - 0.818 - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
32. grhl3 ENSDARG00000078552 897 1.53 0.708 0.822 - - - - - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
33. kdm2bb ENSDARG00000046010 747 1.525 - - - - - 0.749 0.776 - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
34. si:dkey-262g12.4 si:dkey-262g12.4 144 1.509 0.720 - - - - 0.789 - - -
35. NIPAL4 ENSDARG00000059365 597 1.5 - 0.783 - - - 0.717 - - - NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
36. capn7 ENSDARG00000102987 386 1.499 - 0.778 - - - - 0.721 - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
37. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.497 - - - - - 0.717 0.780 - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
38. pold1 ENSDARG00000027689 1148 1.495 - - - - - 0.736 0.759 - - polymerase (DNA directed), delta 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060429-1]
39. obscn obscn 146 1.487 - 0.757 - - - 0.730 - - -
40. si:ch211-161h7.8 ENSDARG00000089919 60 1.48 0.765 - - - - 0.715 - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
41. SORT1 SORT1 33 1.474 0.747 - - - - 0.727 - - -
42. rassf6 ENSDARG00000000804 1090 1.436 0.703 0.733 - - - - - - - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
43. srsf2b ENSDARG00000103893 1437 1.432 - 0.720 - - - 0.712 - - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
44. esrrd ENSDARG00000015064 291 0.984 - 0.984 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
45. TM2D2 ENSDARG00000035515 561 0.983 - 0.983 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
46. CABZ01066717.1 CABZ01066717.1 351 0.982 - 0.982 - - - - - - -
47. fam63b 484 0.979 - 0.979 - - - - - - - family with sequence similarity 63, member B
48. CR376783.1 ENSDARG00000074235 259 0.978 - 0.978 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
49. UBASH3B UBASH3B 292 0.975 - 0.975 - - - - - - -
50. CR388047.3 ENSDARG00000117023 89 0.974 - 0.974 - - - - - - -
51. casp2 ENSDARG00000062052 559 0.974 - 0.974 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
52. zgc:109744 ENSDARG00000070800 262 0.974 - 0.974 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
53. foxn4 ENSDARG00000010591 2332 0.973 - 0.973 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
54. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.973 - 0.973 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
55. MAP3K2 ENSDARG00000062884 34 0.971 - 0.971 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
56. si:ch73-18b11.2 ENSDARG00000094978 148 0.97 - 0.970 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
57. SLC38A9 ENSDARG00000032769 35 0.97 - 0.970 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
58. smdt1 smdt1 99 0.97 - 0.970 - - - - - - -
59. si:ch211-105d18.6 si:ch211-105d18.6 59 0.969 - 0.969 - - - - - - -
60. CT573322.1 CT573322.1 38 0.969 - 0.969 - - - - - - -
61. ppapdc2 ppapdc2 67 0.969 - 0.969 - - - - - - -
62. si:ch1073-155h21.1 ENSDARG00000007582 137 0.969 - 0.969 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
63. si:dkey-228i19.34 si:dkey-228i19.34 43 0.968 - 0.968 - - - - - - -
64. U3_5 U3_5 67 0.968 - 0.968 - - - - - - -
65. CABZ01109624.1 CABZ01109624.1 25 0.968 - 0.968 - - - - - - -
66. ZP2 ZP2 14 0.968 - 0.968 - - - - - - -
67. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.968 - 0.968 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
68. si:ch211-39a7.1 ENSDARG00000037427 31 0.968 - 0.968 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
69. aff4 ENSDARG00000001857 134 0.967 - 0.967 - - - - - - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
70. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.967 - 0.967 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
71. BX005256.1 ENSDARG00000106112 467 0.966 - 0.966 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
72. kcnk13a ENSDARG00000008212 136 0.965 - 0.965 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
73. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.965 - 0.965 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
74. usp45 ENSDARG00000075013 227 0.965 - 0.965 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
75. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.965 - 0.965 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
76. si:dkey-154p10.3 ENSDARG00000068366 153 0.965 - 0.965 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
77. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.965 - 0.965 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
78. C12H10orf2 C12H10orf2 245 0.965 - 0.965 - - - - - - -
79. pgap2 ENSDARG00000044596 60 0.964 - 0.964 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
80. lrrc6 ENSDARG00000053318 146 0.964 - 0.964 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
81. cmasb 499 0.963 - 0.963 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
82. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.963 - 0.963 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
83. tbcelb ENSDARG00000019525 299 0.963 - 0.963 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
84. gga3 ENSDARG00000103667 675 0.963 - 0.963 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
85. unc13d ENSDARG00000078249 91 0.962 - 0.962 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
86. si:dkey-114b16.4 si:dkey-114b16.4 35 0.962 - 0.962 - - - - - - -
87. cyp2aa1 ENSDARG00000099003 297 0.962 - 0.962 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
88. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.961 - 0.961 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
89. serpine2 ENSDARG00000029353 2274 0.961 - 0.961 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
90. rab40c ENSDARG00000061208 1072 0.96 - 0.960 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
91. prc1b ENSDARG00000005993 780 0.96 0.960 - - - - - - - - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
92. NUDT8 ENSDARG00000007722 329 0.96 - 0.960 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
93. plce1 ENSDARG00000087921 44 0.96 - 0.960 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
94. cflara ENSDARG00000055966 464 0.96 - 0.960 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
95. fam57ba ENSDARG00000026875 504 0.959 - 0.959 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
96. rab33ba ENSDARG00000052290 914 0.958 - 0.958 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
97. alg9 ENSDARG00000012840 631 0.958 - 0.958 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
98. cd74a ENSDARG00000009087 20 0.957 - 0.957 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
99. casp3b ENSDARG00000055045 54 0.957 - 0.957 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
100. CABZ01114089.1 CABZ01114089.1 127 0.956 - 0.956 - - - - - - -

There are 1258 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA