Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-238e22.4

Gene Name Gene ID Reads Annotation
si:ch211-238e22.4 ENSDARG00000094500 78 si:ch211-238e22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3632]










Genes with expression patterns similar to si:ch211-238e22.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-238e22.4 ENSDARG00000094500 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-238e22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3632]
2. ndp ENSDARG00000076569 120 2.222 0.735 0.768 - - - 0.719 - - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
3. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1.79 0.887 0.903 - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
4. wdr4 ENSDARG00000090581 42 1.747 0.844 0.903 - - - - - - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
5. si:ch211-220i18.4 ENSDARG00000030262 10 1.729 0.729 1.000 - - - - - - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
6. SPEF1 ENSDARG00000022007 44 1.701 - 0.908 - - - - 0.793 - - sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
7. BX927369.2 BX927369.2 9 1.696 - 0.903 - - - - 0.793 - -
8. AL844186.1 ENSDARG00000114351 41 1.691 - 0.903 - - - - 0.788 - -
9. SYNGAP1 SYNGAP1 4 1.631 - 0.903 - - - 0.728 - - -
10. gc3 31 1.631 - 0.903 - - - 0.728 - - - guanylyl cyclase 3, transcript variant X2
11. dnajb13 ENSDARG00000043157 50 1.621 - - - - - 0.756 - - 0.865 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
12. ctgfb ENSDARG00000104292 69 1.617 - 0.800 - - - - - - 0.817 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
13. si:ch211-161h7.8 ENSDARG00000089919 60 1.615 - 0.903 - - - - 0.712 - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
14. ANGEL1 ENSDARG00000077567 38 1.598 0.791 0.807 - - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
15. EPM2AIP1 EPM2AIP1 4 1.593 0.887 - 0.706 - - - - - -
16. tceb3 40 1.569 - 0.796 - - - - 0.773 - - transcription elongation factor B (SIII), polypeptide 3
17. pald1b ENSDARG00000039352 66 1.566 - 0.834 - - - - 0.732 - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
18. rab11bb ENSDARG00000090086 43 1.539 0.747 0.792 - - - - - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
19. NTN5 ENSDARG00000036422 371 1.537 - 0.719 - - - 0.818 - - - netrin 5 [Source:ZFIN;Acc:ZDB-GENE-130530-593]
20. si:dkey-101k6.5 ENSDARG00000055136 253 1.535 - 0.796 - - - - - - 0.739 si:dkey-101k6.5 [Source:ZFIN;Acc:ZDB-GENE-081105-143]
21. ENSDARG00000075779 ENSDARG00000075779 64 1.534 - 0.800 - - - - 0.734 - -
22. abca2 ENSDARG00000013500 91 1.522 - - - - - - 0.715 - 0.807 ATP-binding cassette, sub-family A (ABC1), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-1]
23. si:dkey-24g18.3 si:dkey-24g18.3 60 1.519 - 0.783 - - - - 0.736 - -
24. ogfrl1 ENSDARG00000061223 64 1.518 0.803 - - - - - 0.715 - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
25. sema7a ENSDARG00000078707 70 1.517 - 0.724 - - - - 0.793 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
26. si:ch1073-181h11.2 ENSDARG00000103883 24 1.506 - 0.800 0.706 - - - - - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
27. CTXN1 ENSDARG00000098284, ENSDARG00000113270 2 1.498 - 0.792 0.706 - - - - - - cortexin 1 [Source:NCBI gene;Acc:101885932]
28. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1.498 0.735 - - - 0.763 - - - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
29. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1.453 - 0.747 0.706 - - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
30. slc16a5 slc16a5 173 1.432 0.703 - - - - - - - 0.729
31. ERAP1_1 ERAP1_1 64 1 - - - - - 1.000 - - -
32. poln ENSDARG00000103961, ENSDARG00000113911 57 1 - 1.000 - - - - - - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
33. ERC1 ENSDARG00000076014 10 1 - 1.000 - - - - - - - ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:HGNC:17072]
34. rbp1b rbp1b 36 1 1.000 - - - - - - - -
35. ttc25_1 ENSDARG00000058140 32 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
36. myb ENSDARG00000053666, ENSDARG00000114024 58 1 - 1.000 - - - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
37. si:dkey-14o1.18 si:dkey-14o1.18 23 1 - 1.000 - - - - - - -
38. AAK1 AAK1 3 1 - 1.000 - - - - - - -
39. cfp ENSDARG00000094451 211 1 - 1.000 - - - - - - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
40. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1 - 1.000 - - - - - - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
41. vps13d ENSDARG00000017986 183 1 - 1.000 - - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
42. LRTM1 ENSDARG00000098742 21 1 - 1.000 - - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
43. grna ENSDARG00000004954 189 1 - 1.000 - - - - - - - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
44. camk1db ENSDARG00000017446 47 1 1.000 - - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
45. si:dkey-29n10.3 si:dkey-29n10.3 66 1 - 1.000 - - - - - - -
46. FP017279.3 FP017279.3 31 1 1.000 - - - - - - - -
47. CU638737.1 CU638737.1 17 0.978 - 0.978 - - - - - - -
48. vcpip1 ENSDARG00000060177 56 0.978 - 0.978 - - - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
49. NAV1_1 NAV1_1 35 0.978 - 0.978 - - - - - - -
50. ttll3 ENSDARG00000053728 7 0.978 - 0.978 - - - - - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
51. zp2.1 ENSDARG00000086352 41 0.976 - - - - - - 0.976 - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
52. si:ch73-57f22.2 ENSDARG00000087453 28 0.976 - - - - - - 0.976 - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
53. pik3cg ENSDARG00000017757 157 0.975 - 0.975 - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
54. Metazoa_SRP_19 Metazoa_SRP_19 17 0.974 0.974 - - - - - - - -
55. CU302436.4 CU302436.4 310 0.969 - - - - - - 0.969 - -
56. si:dkey-32e23.4 ENSDARG00000063159 28 0.965 - - - - - - 0.965 - - si:dkey-32e23.4 [Source:ZFIN;Acc:ZDB-GENE-081105-41]
57. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.96 - - 0.960 - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
58. zgc:171901 ENSDARG00000074365 129 0.958 - - - - - - 0.958 - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
59. C25H1orf51 C25H1orf51 2460 0.954 - - - - - - 0.954 - -
60. pc pc 116 0.953 - - - - - - 0.953 - -
61. BX323854.3 BX323854.3 62 0.952 - - - - - - 0.952 - -
62. U1_50 U1_50 62 0.951 0.951 - - - - - - - -
63. BX324003.1 ENSDARG00000096499 50 0.948 - 0.948 - - - - - - -
64. cyp24a1 ENSDARG00000103277 181 0.948 - - - - - - 0.948 - - cytochrome P450, family 24, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060825-1]
65. npas3b npas3b 1446 0.947 - 0.947 - - - - - - -
66. TRIM35_11 TRIM35_11 23 0.946 - 0.946 - - - - - - -
67. phkg1a ENSDARG00000030604, ENSDARG00000114608 85 0.942 - - - - - 0.942 - - - phosphorylase kinase, gamma 1a (muscle) [Source:ZFIN;Acc:ZDB-GENE-061103-385]
68. PLEKHS1 ENSDARG00000079227 7 0.937 - - - - - - 0.937 - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
69. si:dkey-15h8.16 ENSDARG00000098613 187 0.936 - - - - - - 0.936 - - si:dkey-15h8.16 [Source:ZFIN;Acc:ZDB-GENE-050208-707]
70. slc6a4b ENSDARG00000057017 18 0.935 - - - - - 0.935 - - - solute carrier family 6 (neurotransmitter transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-060314-2]
71. si:ch73-7i4.1 ENSDARG00000094554 771 0.935 - - - - - 0.935 - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
72. si:dkey-27p18.6 4 0.935 - - - - - 0.935 - - - si:dkey-27p18.6, transcript variant X1
73. klhl42 ENSDARG00000006011 46 0.935 - - - - - 0.935 - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
74. ppapdc2 ppapdc2 67 0.931 - - - - - - 0.931 - -
75. clybl ENSDARG00000029729 690 0.928 - 0.928 - - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
76. il2rga ENSDARG00000068858, ENSDARG00000110645 32 0.925 0.925 - - - - - - - - interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
77. C18H19orf47 C18H19orf47 44 0.923 - - - - - 0.923 - - -
78. si:dkey-47k16.4 ENSDARG00000113005 87 0.923 - - - - - - 0.923 - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
79. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 0.92 0.920 - - - - - - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
80. TMEM255A ENSDARG00000073911 924 0.918 - 0.918 - - - - - - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
81. vti1b ENSDARG00000039270 295 0.915 - - - - - - 0.915 - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
82. agtr1b ENSDARG00000045443 232 0.912 - - - - - - - - 0.912 angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
83. cyth3 cyth3 120 0.911 - - - - - - 0.911 - -
84. C2H3orf58 C2H3orf58 39 0.908 - 0.908 - - - - - - -
85. zmiz1b ENSDARG00000102279 26 0.906 - - - - - - 0.906 - - zinc finger, MIZ-type containing 1b [Source:ZFIN;Acc:ZDB-GENE-120206-3]
86. EP400 ENSDARG00000100965 45 0.904 - 0.904 - - - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
87. CCDC83 ENSDARG00000077179 29 0.903 - 0.903 - - - - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
88. ZAN ZAN 11 0.903 - 0.903 - - - - - - -
89. si:dkey-15h8.13 si:dkey-15h8.13 3 0.903 - 0.903 - - - - - - -
90. gnb3b ENSDARG00000002696 46 0.903 - 0.903 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
91. AL953879.1 AL953879.1 5 0.903 - 0.903 - - - - - - -
92. CABZ01071909.3 CABZ01071909.3 14 0.903 - 0.903 - - - - - - -
93. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 0.903 - 0.903 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
94. plxnd1 ENSDARG00000086057 2 0.903 - 0.903 - - - - - - - plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
95. CR354549.1 ENSDARG00000117215 3 0.903 - 0.903 - - - - - - -
96. BX511266.1 BX511266.1 21 0.903 - 0.903 - - - - - - -
97. DTX4_1 ENSDARG00000076302 31 0.903 - 0.903 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
98. nsmce4a ENSDARG00000024311 125 0.903 - 0.903 - - - - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
99. CABZ01088346.1 ENSDARG00000099362 30 0.903 - 0.903 - - - - - - -
100. CABZ01000592.1 CABZ01000592.1 1 0.903 - 0.903 - - - - - - -

There are 1002 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA