Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-237l4.6

Gene Name Gene ID Reads Annotation
si:ch211-237l4.6 ENSDARG00000056915 49 si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]










Genes with expression patterns similar to si:ch211-237l4.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-237l4.6 ENSDARG00000056915 49 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
2. traf1 ENSDARG00000069482 50 2.855 - 1.000 - - - - 0.914 0.941 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
3. lrrc18b ENSDARG00000076236 5 2.714 1.000 1.000 - - - - 0.714 - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
4. CU929052.1 CU929052.1 642 2.643 1.000 - - - 0.729 - 0.914 - -
5. prdm1b ENSDARG00000098925 440 2.486 1.000 - 0.738 - 0.748 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
6. cdk5r1a ENSDARG00000037916 46 2 1.000 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
7. pcdh1g18 ENSDARG00000099447 7 2 1.000 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
8. si:ch73-7i4.1 ENSDARG00000094554 771 2 1.000 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
9. NFATC4 ENSDARG00000054162 44 1.976 - 1.000 - - - - 0.976 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
10. UBASH3B_1 UBASH3B_1 28 1.961 1.000 0.961 - - - - - - -
11. si:ch211-199m9.2 si:ch211-199m9.2 9 1.914 - 1.000 - - - - 0.914 - -
12. PCDH10 PCDH10 7 1.914 - 1.000 - - - - 0.914 - -
13. phf21aa ENSDARG00000006878 31 1.914 - 1.000 - - - - 0.914 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
14. ca10b ENSDARG00000009568 8 1.914 - 1.000 - - - - 0.914 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
15. urgcp ENSDARG00000036767 6 1.914 - 1.000 - - - - 0.914 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
16. mtus2 mtus2 22 1.914 - 1.000 - - - - 0.914 - -
17. ABHD12B_1 ABHD12B_1 57 1.888 - 1.000 - - - - 0.888 - -
18. si:dkeyp-106c3.1 ENSDARG00000090623 225 1.875 - 1.000 - - - 0.875 - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
19. si:dkey-14o6.7 si:dkey-14o6.7 9 1.854 0.854 1.000 - - - - - - -
20. kirrel3a ENSDARG00000075806 36 1.854 0.957 - - - - 0.897 - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
21. si:dkey-81p22.11 ENSDARG00000093797 68 1.854 0.854 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
22. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.849 - 1.000 - - - - 0.849 - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
23. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.837 - 1.000 - - - - 0.837 - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
24. ppp1r3db ENSDARG00000076248 32 1.828 0.957 - - - - 0.871 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
25. olfm1a ENSDARG00000018270 107 1.806 - 1.000 - - - - 0.806 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
26. dclre1a ENSDARG00000091768 94 1.795 - 1.000 - - - - 0.795 - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
27. nub1 ENSDARG00000061417 33 1.794 - - - - - 0.880 0.914 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
28. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1.785 - - - - - 0.871 0.914 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
29. top3b ENSDARG00000027586 8 1.785 - - - - - 0.871 0.914 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
30. cdh18 cdh18 64 1.785 - 1.000 - - - - 0.785 - -
31. si:dkeyp-3f10.17 ENSDARG00000087254 1 1.785 - - - - - 0.871 0.914 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
32. PGBD4_4 PGBD4_4 15 1.785 - - - - - 0.871 0.914 - -
33. lhx5 ENSDARG00000057936 785 1.781 - 1.000 0.781 - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
34. si:dkey-14d8.9 si:dkey-14d8.9 66 1.771 1.000 0.771 - - - - - - -
35. wdr17 ENSDARG00000075098 83 1.77 - 1.000 - - - - 0.770 - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
36. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.766 - 0.852 - - - - 0.914 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
37. TMEM57 TMEM57 260 1.761 - 1.000 0.761 - - - - - -
38. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.758 0.840 - - - - - 0.918 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
39. b3galnt2 ENSDARG00000046133 68 1.727 0.880 0.847 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
40. cd40 ENSDARG00000054968 90 1.716 - - - - - - 0.773 0.943 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
41. si:ch211-59h6.1 ENSDARG00000013022 193 1.705 - - - - - - 0.793 0.912 - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
42. mapk15 ENSDARG00000100822 157 1.702 0.815 0.887 - - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
43. TRABD2A ENSDARG00000089701 401 1.701 - - - - - - 0.838 0.863 - TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
44. BX511021.2 ENSDARG00000097646 5 1.697 - - - - 0.783 - 0.914 - -
45. gpr56 gpr56 523 1.692 - 0.823 - - - - - 0.869 -
46. si:ch211-141o9.10 ENSDARG00000077900 98 1.691 - 0.844 - - - - - 0.847 - si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]
47. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.669 - - - - 0.755 - 0.914 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
48. si:dkey-14d8.2 38 1.664 - - - - - 0.726 - 0.938 - si:dkey-14d8.2
49. ism2 ism2 153 1.652 - - - - - - 0.781 0.871 -
50. paqr7a ENSDARG00000100462 15 1.651 - - - - 0.823 - 0.828 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
51. foxa2 ENSDARG00000003411 2309 1.623 0.702 - - - - 0.921 - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
52. BX957297.2 ENSDARG00000105608 194 1.62 - 0.742 - - - 0.878 - - -
53. AL954696.1 ENSDARG00000078442 768 1.602 - - - - - - 0.723 0.879 - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
54. si:dkey-11e23.4 si:dkey-11e23.4 46 1.591 0.848 - - - - - 0.743 - -
55. eomesa ENSDARG00000006640 257 1.573 - - 0.824 - 0.749 - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
56. tbr1b ENSDARG00000004712 248 1.566 - - 0.843 - 0.723 - - - - T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
57. GRIK3 ENSDARG00000077715 178 1.549 - - - - - 0.749 0.800 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
58. polr3h ENSDARG00000102590 209 1.543 - - - - - 0.700 0.843 - - polymerase (RNA) III (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-040718-179]
59. eef1a1a ENSDARG00000039502 234 1.536 0.802 - - - - 0.734 - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
60. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.532 - - - - 0.809 0.723 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
61. sulf2 sulf2 1286 1.482 - - - - - 0.726 - 0.756 -
62. zbtb20 ENSDARG00000005586 195 1.464 - - 0.728 - - - 0.736 - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
63. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
64. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
65. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
66. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
67. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
68. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
69. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
70. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
71. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
72. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
73. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
74. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
75. si:dkey-241f21.7 si:dkey-241f21.7 3 1 - 1.000 - - - - - - -
76. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
77. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
78. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
79. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
80. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
81. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
82. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
83. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
84. plscr3a ENSDARG00000093078 7 1 - 1.000 - - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
85. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
86. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
87. hsf4 ENSDARG00000013251 5 1 1.000 - - - - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
88. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
89. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
90. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
91. sowahca ENSDARG00000098790 1 1 - 1.000 - - - - - - - sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
92. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
93. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
94. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
95. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
96. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
97. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
98. bmp1b ENSDARG00000028053 25 1 - 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
99. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
100. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]

There are 1331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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