Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-237l4.6

Gene Name Gene ID Reads Annotation
si:ch211-237l4.6 ENSDARG00000056915 49 si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]










Genes with expression patterns similar to si:ch211-237l4.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-237l4.6 ENSDARG00000056915 49 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
2. traf1 ENSDARG00000069482 50 2.855 - 1.000 - - - - 0.914 0.941 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
3. lrrc18b ENSDARG00000076236 5 2.714 1.000 1.000 - - - - 0.714 - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
4. CU929052.1 CU929052.1 642 2.643 1.000 - - - 0.729 - 0.914 - -
5. prdm1b ENSDARG00000098925 440 2.486 1.000 - 0.738 - 0.748 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
6. pcdh1g18 ENSDARG00000099447 7 2 1.000 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
7. cdk5r1a ENSDARG00000037916 46 2 1.000 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
8. si:ch73-7i4.1 ENSDARG00000094554 771 2 1.000 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
9. NFATC4 ENSDARG00000054162 44 1.976 - 1.000 - - - - 0.976 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
10. UBASH3B_1 UBASH3B_1 28 1.961 1.000 0.961 - - - - - - -
11. urgcp ENSDARG00000036767 6 1.914 - 1.000 - - - - 0.914 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
12. ca10b ENSDARG00000009568 8 1.914 - 1.000 - - - - 0.914 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
13. phf21aa ENSDARG00000006878 31 1.914 - 1.000 - - - - 0.914 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
14. PCDH10 PCDH10 7 1.914 - 1.000 - - - - 0.914 - -
15. si:ch211-199m9.2 si:ch211-199m9.2 9 1.914 - 1.000 - - - - 0.914 - -
16. mtus2 mtus2 22 1.914 - 1.000 - - - - 0.914 - -
17. ABHD12B_1 ABHD12B_1 57 1.888 - 1.000 - - - - 0.888 - -
18. si:dkeyp-106c3.1 ENSDARG00000090623 225 1.875 - 1.000 - - - 0.875 - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
19. kirrel3a ENSDARG00000075806 36 1.854 0.957 - - - - 0.897 - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
20. si:dkey-81p22.11 ENSDARG00000093797 68 1.854 0.854 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
21. si:dkey-14o6.7 si:dkey-14o6.7 9 1.854 0.854 1.000 - - - - - - -
22. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.849 - 1.000 - - - - 0.849 - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
23. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.837 - 1.000 - - - - 0.837 - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
24. ppp1r3db ENSDARG00000076248 32 1.828 0.957 - - - - 0.871 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
25. olfm1a ENSDARG00000018270 107 1.806 - 1.000 - - - - 0.806 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
26. dclre1a ENSDARG00000091768 94 1.795 - 1.000 - - - - 0.795 - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
27. nub1 ENSDARG00000061417 33 1.794 - - - - - 0.880 0.914 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
28. top3b ENSDARG00000027586 8 1.785 - - - - - 0.871 0.914 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
29. si:dkeyp-3f10.17 ENSDARG00000087254 1 1.785 - - - - - 0.871 0.914 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
30. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1.785 - - - - - 0.871 0.914 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
31. PGBD4_4 PGBD4_4 15 1.785 - - - - - 0.871 0.914 - -
32. cdh18 cdh18 64 1.785 - 1.000 - - - - 0.785 - -
33. lhx5 ENSDARG00000057936 785 1.781 - 1.000 0.781 - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
34. si:dkey-14d8.9 si:dkey-14d8.9 66 1.771 1.000 0.771 - - - - - - -
35. wdr17 ENSDARG00000075098 83 1.77 - 1.000 - - - - 0.770 - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
36. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.766 - 0.852 - - - - 0.914 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
37. TMEM57 TMEM57 260 1.761 - 1.000 0.761 - - - - - -
38. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.758 0.840 - - - - - 0.918 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
39. b3galnt2 ENSDARG00000046133 68 1.727 0.880 0.847 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
40. cd40 ENSDARG00000054968 90 1.716 - - - - - - 0.773 0.943 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
41. si:ch211-59h6.1 ENSDARG00000013022 193 1.705 - - - - - - 0.793 0.912 - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
42. mapk15 ENSDARG00000100822 157 1.702 0.815 0.887 - - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
43. TRABD2A ENSDARG00000089701 401 1.701 - - - - - - 0.838 0.863 - TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
44. BX511021.2 ENSDARG00000097646 5 1.697 - - - - 0.783 - 0.914 - -
45. gpr56 gpr56 523 1.692 - 0.823 - - - - - 0.869 -
46. si:ch211-141o9.10 ENSDARG00000077900 98 1.691 - 0.844 - - - - - 0.847 - si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]
47. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.669 - - - - 0.755 - 0.914 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
48. si:dkey-14d8.2 38 1.664 - - - - - 0.726 - 0.938 - si:dkey-14d8.2
49. ism2 ism2 153 1.652 - - - - - - 0.781 0.871 -
50. paqr7a ENSDARG00000100462 15 1.651 - - - - 0.823 - 0.828 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
51. foxa2 ENSDARG00000003411 2309 1.623 0.702 - - - - 0.921 - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
52. BX957297.2 ENSDARG00000105608 194 1.62 - 0.742 - - - 0.878 - - -
53. AL954696.1 ENSDARG00000078442 768 1.602 - - - - - - 0.723 0.879 - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
54. si:dkey-11e23.4 si:dkey-11e23.4 46 1.591 0.848 - - - - - 0.743 - -
55. eomesa ENSDARG00000006640 257 1.573 - - 0.824 - 0.749 - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
56. tbr1b ENSDARG00000004712 248 1.566 - - 0.843 - 0.723 - - - - T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
57. GRIK3 ENSDARG00000077715 178 1.549 - - - - - 0.749 0.800 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
58. polr3h ENSDARG00000102590 209 1.543 - - - - - 0.700 0.843 - - polymerase (RNA) III (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-040718-179]
59. eef1a1a ENSDARG00000039502 234 1.536 0.802 - - - - 0.734 - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
60. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.532 - - - - 0.809 0.723 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
61. sulf2 sulf2 1286 1.482 - - - - - 0.726 - 0.756 -
62. zbtb20 ENSDARG00000005586 195 1.464 - - 0.728 - - - 0.736 - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
63. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
64. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
65. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
66. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
67. vcam1 vcam1 243 1 - 1.000 - - - - - - -
68. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
69. nmrk1 ENSDARG00000037913 18 1 - 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
70. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
71. LRFN4 LRFN4 59 1 - 1.000 - - - - - - -
72. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
73. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
74. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
75. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
76. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
77. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
78. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
79. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
80. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
81. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
82. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
83. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
84. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
85. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
86. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
87. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
88. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
89. dmrt1 ENSDARG00000007349 16 1 - 1.000 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
90. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
91. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
92. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
93. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
94. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
95. HELZ2_1 ENSDARG00000012600 53 1 - 1.000 - - - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
96. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
97. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
98. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
99. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
100. GLS2 GLS2 10 1 - 1.000 - - - - - - -

There are 1331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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