Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-236l14.4

Gene Name Gene ID Reads Annotation
si:ch211-236l14.4 ENSDARG00000062059 466 si:ch211-236l14.4 [Source:ZFIN;Acc:ZDB-GENE-081104-189]










Genes with expression patterns similar to si:ch211-236l14.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-236l14.4 ENSDARG00000062059 466 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 si:ch211-236l14.4 [Source:ZFIN;Acc:ZDB-GENE-081104-189]
2. tspan12 ENSDARG00000032389 419 1.67 0.801 - - - - - 0.869 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
3. grem2 grem2 743 1.573 0.772 - - - - - 0.801 - -
4. smpx ENSDARG00000045302 2175 1.56 0.763 - - - - - 0.797 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
5. zgc:136930 ENSDARG00000055192 1208 1.53 0.810 - - - - - 0.720 - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
6. cct7 ENSDARG00000007385 1513 1.489 - - - - 0.708 - 0.781 - - chaperonin containing TCP1, subunit 7 (eta) [Source:ZFIN;Acc:ZDB-GENE-020419-7]
7. prkg1b ENSDARG00000031702 405 1.477 - - - - - - 0.765 - 0.712 protein kinase cGMP-dependent 1b [Source:ZFIN;Acc:ZDB-GENE-080225-40]
8. speg speg 334 1.47 0.741 - - - - - 0.729 - -
9. ablim2 ENSDARG00000055223 1934 1.469 0.738 - - - - - 0.731 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
10. MAN2A2 ENSDARG00000063101 922 1.457 - 0.727 - - - - 0.730 - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
11. ntd5 ENSDARG00000040944 4988 1.443 0.722 - - - - - 0.721 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
12. CABZ01044297.1 CABZ01044297.1 2015 1.42 0.703 - - - - - 0.717 - -
13. smarcd3a ENSDARG00000038786 2894 0.947 - - - - - - 0.947 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
14. PCDH8 ENSDARG00000102185 52 0.943 0.943 - - - - - - - - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
15. terf1 ENSDARG00000058710 317 0.938 - 0.938 - - - - - - - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
16. fgf13a ENSDARG00000035056 752 0.936 - - - - - - 0.936 - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
17. SLC9B1 SLC9B1 137 0.934 0.934 - - - - - - - -
18. cacna2d1a ENSDARG00000014804 1924 0.929 - - - - - - 0.929 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
19. akap6 ENSDARG00000077295 1382 0.926 - - - - - - 0.926 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
20. cacna1sb ENSDARG00000042552 1320 0.923 - - - - - - 0.923 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
21. CU469518.1 CU469518.1 214 0.921 0.921 - - - - - - - -
22. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 0.919 - - - - - - 0.919 - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
23. plcd4a ENSDARG00000057975 241 0.915 0.915 - - - - - - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
24. LIMD1_1 LIMD1_1 348 0.913 - - - - - - 0.913 - -
25. mef2cb ENSDARG00000009418 1124 0.906 - - - - - - 0.906 - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
26. ptar1 ENSDARG00000102338 511 0.902 - 0.902 - - - - - - - protein prenyltransferase alpha subunit repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-17]
27. srl ENSDARG00000104587 11126 0.901 - - - - - - 0.901 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
28. lims2 ENSDARG00000014976 1248 0.896 - - - - - - 0.896 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
29. fxr1 ENSDARG00000022968 2831 0.896 - - - - - - 0.896 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
30. mir133b_1 671 0.896 - - - - - - 0.896 - - microRNA 133b
31. CU972452.1 CU972452.1 1046 0.895 0.895 - - - - - - - -
32. cap2 ENSDARG00000104478 3266 0.895 - - - - - - 0.895 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
33. CABZ01075242.1 ENSDARG00000114227 9 0.895 0.895 - - - - - - - -
34. BX324201.1 BX324201.1 3302 0.895 - - - - - - 0.895 - -
35. casq1b ENSDARG00000018105 2643 0.893 - - - - - - 0.893 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
36. nup155 ENSDARG00000001777 3417 0.892 - 0.892 - - - - - - - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
37. TNS1 TNS1 628 0.891 - - - - - - 0.891 - -
38. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 0.89 - - - - - - 0.890 - - BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
39. aqp1a.1 ENSDARG00000023713 3237 0.888 - - - - - - 0.888 - - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
40. CR352249.1 ENSDARG00000114701 857 0.886 0.886 - - - - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
41. rtn2a ENSDARG00000016088 12184 0.885 - - - - - - 0.885 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
42. cyp1d1 ENSDARG00000035569 628 0.883 - - - - - - 0.883 - - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
43. zgc:92113 1738 0.882 - - - - - - 0.882 - - zgc:92113
44. ihhb ENSDARG00000058815 31 0.882 0.882 - - - - - - - - Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135]
45. pdlim7 ENSDARG00000103854 465 0.881 - - - - - - 0.881 - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
46. eprs ENSDARG00000060494 4729 0.881 - - - - - - 0.881 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
47. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 0.88 - - - - - - 0.880 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
48. METTL21C METTL21C 1717 0.879 - - - - - - 0.879 - -
49. stac3 ENSDARG00000098883 1765 0.879 - - - - - - 0.879 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
50. polr1d ENSDARG00000037570 860 0.879 - - - - - - 0.879 - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
51. myod1 ENSDARG00000030110 6019 0.877 - - - - - - 0.877 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
52. atp1b3b ENSDARG00000042837 5163 0.874 - - - - - - 0.874 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
53. usp2a ENSDARG00000020107 2586 0.873 - - - - - - 0.873 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
54. lgals2a ENSDARG00000054942 888 0.87 - - - - - - 0.870 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
55. si:ch211-156j16.1 ENSDARG00000092035 7441 0.87 - - - - - - 0.870 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
56. fbp2 ENSDARG00000012366 1042 0.869 - - - - - - 0.869 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
57. FRMD5 ENSDARG00000075942 569 0.868 - - - - - - 0.868 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
58. myhc4 ENSDARG00000035438 1322 0.868 - - - - - - 0.868 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
59. CU928220.2 CU928220.2 537 0.868 - - - - - - 0.868 - -
60. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 0.867 - - - - - - 0.867 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
61. unc45b ENSDARG00000008433 8298 0.866 - - - - - - 0.866 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
62. tnw 16679 0.866 - - - - - - 0.866 - - tenascin W, transcript variant X2
63. fgf6a ENSDARG00000009351 799 0.866 - - - - - - 0.866 - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
64. CABZ01080590.2 CABZ01080590.2 2038 0.866 - - - - - - 0.866 - -
65. myom1a ENSDARG00000061249 10230 0.865 - - - - - - 0.865 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
66. rp42-pen rp42-pen 3395 0.865 - - - - - - 0.865 - -
67. top1mt ENSDARG00000027824, ENSDARG00000104809 195 0.865 0.865 - - - - - - - - DNA topoisomerase I mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040624-2]
68. SPEG SPEG 4017 0.864 - - - - - - 0.864 - -
69. tmem182 tmem182 12589 0.864 - - - - - - 0.864 - -
70. synpo2b ENSDARG00000077157 1009 0.863 - - - - - - 0.863 - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
71. sox6 ENSDARG00000015536 7728 0.863 - - - - - - 0.863 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
72. ddx55 ENSDARG00000009864 415 0.863 - - - - - - 0.863 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
73. si:ch211-197l9.2 ENSDARG00000078244 655 0.862 - - - - - - 0.862 - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
74. tgm2a ENSDARG00000070157 4516 0.862 - - - - - - 0.862 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
75. ahsa1 ahsa1 2012 0.862 - - - - - - 0.862 - -
76. CAPN1_1 ENSDARG00000055338 288 0.862 - - - - - - 0.862 - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
77. dlk2 ENSDARG00000076247 387 0.862 - - - - - - 0.862 - - delta-like 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081107-4]
78. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 0.861 - - - - - - 0.861 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
79. ckmt2 ckmt2 768 0.861 - - - - - - 0.861 - -
80. BX649554.3 BX649554.3 949 0.861 - - - - - - 0.861 - -
81. adss ENSDARG00000002071 5497 0.86 - - - - - - 0.860 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
82. CABZ01068153.1 CABZ01068153.1 211 0.859 - - - - - - 0.859 - -
83. nmrk2 ENSDARG00000067848 10293 0.859 - - - - - - 0.859 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
84. col5a3a ENSDARG00000098294 1004 0.858 - 0.858 - - - - - - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
85. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 0.858 - - - - - - 0.858 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
86. NRAP ENSDARG00000009341 3565 0.857 - - - - - - 0.857 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
87. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.857 - - - - - - 0.857 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
88. larsb ENSDARG00000019280 3924 0.855 - - - - - - 0.855 - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
89. klhl41b ENSDARG00000006757 10762 0.855 - - - - - - 0.855 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
90. NBL1 428 0.855 0.855 - - - - - - - - neuroblastoma 1, DAN family BMP antagonist
91. xirp2a ENSDARG00000071113 7113 0.854 - - - - - - 0.854 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
92. prx ENSDARG00000017246 6183 0.854 - - - - - - 0.854 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
93. MCAM MCAM 1765 0.854 - - - - - - 0.854 - -
94. abl2 ENSDARG00000013841 145 0.854 - 0.854 - - - - - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
95. ryr1b ENSDARG00000023797 5693 0.853 - - - - - - 0.853 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
96. cct3 ENSDARG00000016173 15869 0.853 - - - - - - 0.853 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
97. smyd2a ENSDARG00000055151 2505 0.853 - - - - - - 0.853 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
98. DNAJA4 ENSDARG00000051762 5657 0.853 - - - - - - 0.853 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
99. SNORA81 SNORA81 47 0.852 0.852 - - - - - - - -
100. mafa ENSDARG00000015890 2140 0.852 - - - - - - 0.852 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]

There are 857 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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