Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-235f12.5

Gene Name Gene ID Reads Annotation
si:ch211-235f12.5 si:ch211-235f12.5 1










Genes with expression patterns similar to si:ch211-235f12.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-235f12.5 si:ch211-235f12.5 1 2 1.000 - - - 1.000 - - - -
2. si:dkey-113d16.9 si:dkey-113d16.9 345 1 1.000 - - - - - - - -
3. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
4. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
5. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
6. CU207301.2 ENSDARG00000097677 2 1 - - - - 1.000 - - - -
7. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
8. CR759920.1 CR759920.1 4 1 - - - - 1.000 - - - -
9. cpo ENSDARG00000077688 1 1 - - - - 1.000 - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
10. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
11. cx28.9 ENSDARG00000041797 12 1 - - - - 1.000 - - - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
12. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
13. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
14. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
15. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 1.000 - - - - - - - -
16. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
17. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
18. GRIN3A ENSDARG00000075802 27 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
19. slc6a19b ENSDARG00000056719 140 1 - - - - 1.000 - - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
20. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
21. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
22. lingo2 lingo2 67 1 1.000 - - - - - - - -
23. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - 1.000 - - - - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
24. si:dkey-269o24.7 si:dkey-269o24.7 28 1 - - - - 1.000 - - - -
25. fancg ENSDARG00000024967, ENSDARG00000113462 82 1 1.000 - - - - - - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
26. EGFR EGFR 1 1 - - - - 1.000 - - - -
27. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
28. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
29. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
30. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
31. nfatc1 ENSDARG00000036168 16 1 1.000 - - - - - - - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
32. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
33. si:dkey-263l8.2 si:dkey-263l8.2 3 1 - - - - 1.000 - - - -
34. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
35. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - 1.000 - - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
36. tmem184b tmem184b 2 1 1.000 - - - - - - - -
37. CT025934.2 CT025934.2 22 1 - - - - 1.000 - - - -
38. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
39. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
40. si:ch211-131e11.21 si:ch211-131e11.21 1 1 1.000 - - - - - - - -
41. nt5c1ba ENSDARG00000018153 31 1 1.000 - - - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
42. VWDE_1 VWDE_1 2 1 1.000 - - - - - - - -
43. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
44. BX957311.1 ENSDARG00000097710 1 1 - - - - 1.000 - - - -
45. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
46. efr3ba ENSDARG00000033516 19 1 - - - - 1.000 - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
47. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
48. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
49. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
50. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
51. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
52. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
53. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
54. fgf19 ENSDARG00000098663 12 1 - - - - 1.000 - - - - fibroblast growth factor 19 [Source:ZFIN;Acc:ZDB-GENE-030729-32]
55. RAB3IL1 ENSDARG00000007711 11 1 - - - - 1.000 - - - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
56. tlr1 ENSDARG00000100649 2 1 - - - - 1.000 - - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
57. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
58. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
59. flj13639 ENSDARG00000010764 29 1 1.000 - - - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
60. hsf4 ENSDARG00000013251 5 1 1.000 - - - - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
61. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
62. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
63. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - - - 1.000 - - - -
64. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
65. BX004816.2 ENSDARG00000087012 3 1 - - - - 1.000 - - - -
66. pcdh1g18 ENSDARG00000099447 7 1 1.000 - - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
67. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
68. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1 1.000 - - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
69. nsun5_1 ENSDARG00000043209 3 1 1.000 - - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
70. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
71. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - 1.000 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
72. bmp8a ENSDARG00000035677 40 1 1.000 - - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
73. si:dkey-90a24.1 3 1 - - - - 1.000 - - - - si:dkey-90a24.1, transcript variant X4
74. DOCK9 ENSDARG00000114086 3 1 - - - - 1.000 - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
75. NPFFR1 ENSDARG00000111997 29 1 1.000 - - - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
76. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
77. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
78. BX649331.1 ENSDARG00000098721 1 1 - - - - 1.000 - - - -
79. SCARNA15 SCARNA15 1 1 - - - - 1.000 - - - -
80. rad9b ENSDARG00000075632 1 1 - - - - 1.000 - - - - RAD9 checkpoint clamp component B [Source:ZFIN;Acc:ZDB-GENE-040910-3]
81. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
82. si:dkey-238o14.7 ENSDARG00000103283 1 1 - - - - 1.000 - - - - si:dkey-238o14.7 [Source:ZFIN;Acc:ZDB-GENE-110913-54]
83. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
84. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
85. cobl ENSDARG00000091006 4 1 - - - - 1.000 - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
86. eif4e1b ENSDARG00000014565 12 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
87. CR846080.4 CR846080.4 6 1 - - - - 1.000 - - - -
88. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
89. foxq1a ENSDARG00000030896 121 1 1.000 - - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
90. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
91. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - 1.000 - - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
92. cdk5r1a ENSDARG00000037916 46 1 1.000 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
93. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
94. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
95. CU929052.1 CU929052.1 642 1 1.000 - - - - - - - -
96. zgc:110286 92 1 - - - - 1.000 - - - - zgc:110286
97. prdm1b ENSDARG00000098925 440 1 1.000 - - - - - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
98. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - 1.000 - - - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
99. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
100. si:dkey-146m20.14 si:dkey-146m20.14 1 1 - - - - 1.000 - - - -

There are 193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA