Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-235f12.5

Gene Name Gene ID Reads Annotation
si:ch211-235f12.5 si:ch211-235f12.5 1










Genes with expression patterns similar to si:ch211-235f12.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-235f12.5 si:ch211-235f12.5 1 2 1.000 - - - 1.000 - - - -
2. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
3. SLC1A7 SLC1A7 3 1 1.000 - - - - - - - -
4. BX004816.2 ENSDARG00000087012 3 1 - - - - 1.000 - - - -
5. slc6a19b ENSDARG00000056719 140 1 - - - - 1.000 - - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
6. BX248230.1 BX248230.1 1 1 - - - - 1.000 - - - -
7. zgc:110286 92 1 - - - - 1.000 - - - - zgc:110286
8. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
9. BX957311.1 ENSDARG00000097710 1 1 - - - - 1.000 - - - -
10. eif4e1b ENSDARG00000014565 12 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
11. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
12. tmem184b tmem184b 2 1 1.000 - - - - - - - -
13. btr29 ENSDARG00000099138 5 1 - - - - 1.000 - - - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
14. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
15. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
16. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
17. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
18. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
19. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - 1.000 - - - - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
20. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
21. CU207301.2 ENSDARG00000097677 2 1 - - - - 1.000 - - - -
22. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
23. SCARNA15 SCARNA15 1 1 - - - - 1.000 - - - -
24. cpo ENSDARG00000077688 1 1 - - - - 1.000 - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
25. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
26. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
27. si:dkey-238o14.7 ENSDARG00000103283 1 1 - - - - 1.000 - - - - si:dkey-238o14.7 [Source:ZFIN;Acc:ZDB-GENE-110913-54]
28. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
29. si:dkey-90a24.1 3 1 - - - - 1.000 - - - - si:dkey-90a24.1, transcript variant X4
30. lingo2 lingo2 67 1 1.000 - - - - - - - -
31. CCDC18_1 CCDC18_1 3 1 - - - - 1.000 - - - -
32. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
33. GRIN3A ENSDARG00000075802 27 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
34. mir196b ENSDARG00000081346 35 1 1.000 - - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
35. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
36. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - 1.000 - - - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
37. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
38. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
39. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
40. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
41. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
42. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
43. cpa5 ENSDARG00000021339 61 1 1.000 - - - - - - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
44. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
45. rgs13 ENSDARG00000017653 8 1 - - - - 1.000 - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
46. CR846080.4 CR846080.4 6 1 - - - - 1.000 - - - -
47. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
48. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
49. cobl ENSDARG00000091006 4 1 - - - - 1.000 - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
50. gdf7 ENSDARG00000042784 36 1 1.000 - - - - - - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
51. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 1.000 - - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
52. ddrgk1 ENSDARG00000037172 14 1 - - - - 1.000 - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
53. styx ENSDARG00000057699 48 1 1.000 - - - - - - - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
54. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
55. si:dkey-40h17.5 si:dkey-40h17.5 1 1 - - - - 1.000 - - - -
56. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
57. CU929052.1 CU929052.1 642 1 1.000 - - - - - - - -
58. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
59. si:dkey-146m20.14 si:dkey-146m20.14 1 1 - - - - 1.000 - - - -
60. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
61. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
62. CT025934.2 CT025934.2 22 1 - - - - 1.000 - - - -
63. cx28.9 ENSDARG00000041797 12 1 - - - - 1.000 - - - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
64. hsf4 ENSDARG00000013251 5 1 1.000 - - - - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
65. flj13639 ENSDARG00000010764 29 1 1.000 - - - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
66. si:dkey-269o24.7 si:dkey-269o24.7 28 1 - - - - 1.000 - - - -
67. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
68. TRIM35_7 TRIM35_7 22 1 - - - - 1.000 - - - -
69. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
70. CR759920.1 CR759920.1 4 1 - - - - 1.000 - - - -
71. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
72. tlr1 ENSDARG00000100649 2 1 - - - - 1.000 - - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
73. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
74. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
75. U5_3 U5_3 3 1 1.000 - - - - - - - -
76. pcdh1g18 ENSDARG00000099447 7 1 1.000 - - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
77. si:dkey-263l8.2 si:dkey-263l8.2 3 1 - - - - 1.000 - - - -
78. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
79. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - 1.000 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
80. CELA1_4 CELA1_4 1 1 - - - - 1.000 - - - -
81. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
82. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
83. EGFR EGFR 1 1 - - - - 1.000 - - - -
84. si:ch211-283g2.1 ENSDARG00000046091 123 1 - - - - 1.000 - - - - si:ch211-283g2.1 [Source:ZFIN;Acc:ZDB-GENE-060531-57]
85. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
86. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
87. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
88. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
89. DOCK9 ENSDARG00000114086 3 1 - - - - 1.000 - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
90. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
91. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
92. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
93. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
94. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
95. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
96. CABZ01048549.1 CABZ01048549.1 1 1 - - - - 1.000 - - - -
97. BX649331.1 ENSDARG00000098721 1 1 - - - - 1.000 - - - -
98. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
99. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
100. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]

There are 193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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