Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-235f12.5

Gene Name Gene ID Reads Annotation
si:ch211-235f12.5 si:ch211-235f12.5 1










Genes with expression patterns similar to si:ch211-235f12.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-235f12.5 si:ch211-235f12.5 1 2 1.000 - - - 1.000 - - - -
2. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
3. nfatc1 ENSDARG00000036168 16 1 1.000 - - - - - - - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
4. GRIN3A ENSDARG00000075802 27 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
5. U5_3 U5_3 3 1 1.000 - - - - - - - -
6. si:dkey-146m20.14 si:dkey-146m20.14 1 1 - - - - 1.000 - - - -
7. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
8. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
9. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
10. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
11. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
12. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
13. CT025934.2 CT025934.2 22 1 - - - - 1.000 - - - -
14. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
15. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
16. gdf7 ENSDARG00000042784 36 1 1.000 - - - - - - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
17. VWDE_1 VWDE_1 2 1 1.000 - - - - - - - -
18. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
19. zgc:110286 92 1 - - - - 1.000 - - - - zgc:110286
20. cpo ENSDARG00000077688 1 1 - - - - 1.000 - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
21. si:dkey-263l8.2 si:dkey-263l8.2 3 1 - - - - 1.000 - - - -
22. tmem184b tmem184b 2 1 1.000 - - - - - - - -
23. CU207301.2 ENSDARG00000097677 2 1 - - - - 1.000 - - - -
24. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
25. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
26. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
27. rgs13 ENSDARG00000017653 8 1 - - - - 1.000 - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
28. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
29. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
30. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 1.000 - - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
31. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
32. mir22a-1 mir22a-1 192 1 1.000 - - - - - - - -
33. cx28.9 ENSDARG00000041797 12 1 - - - - 1.000 - - - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
34. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - 1.000 - - - - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
35. si:dkey-90a24.1 3 1 - - - - 1.000 - - - - si:dkey-90a24.1, transcript variant X4
36. TRIM35_7 TRIM35_7 22 1 - - - - 1.000 - - - -
37. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
38. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
39. hsf4 ENSDARG00000013251 5 1 1.000 - - - - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
40. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - - - 1.000 - - - -
41. prdm1b ENSDARG00000098925 440 1 1.000 - - - - - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
42. bfb ENSDARG00000005616, ENSDARG00000110364 30 1 - - - - 1.000 - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
43. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - 1.000 - - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
44. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 1.000 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
45. si:ch211-113a14.15 3 1 1.000 - - - - - - - - si:ch211-113a14.15
46. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
47. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
48. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1 1.000 - - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
49. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - 1.000 - - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
50. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
51. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
52. si:dkey-269o24.7 si:dkey-269o24.7 28 1 - - - - 1.000 - - - -
53. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
54. BX649331.1 ENSDARG00000098721 1 1 - - - - 1.000 - - - -
55. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
56. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
57. CD200_2 CD200_2 47 1 1.000 - - - - - - - -
58. EGFR EGFR 1 1 - - - - 1.000 - - - -
59. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
60. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
61. si:dkey-113d16.9 si:dkey-113d16.9 345 1 1.000 - - - - - - - -
62. dock11 ENSDARG00000062485 17 1 1.000 - - - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
63. BX957311.1 ENSDARG00000097710 1 1 - - - - 1.000 - - - -
64. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
65. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
66. RAB3IL1 ENSDARG00000007711 11 1 - - - - 1.000 - - - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
67. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
68. BX248230.1 BX248230.1 1 1 - - - - 1.000 - - - -
69. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
70. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
71. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - 1.000 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
72. BX004816.2 ENSDARG00000087012 3 1 - - - - 1.000 - - - -
73. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
74. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
75. mir196b ENSDARG00000081346 35 1 1.000 - - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
76. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
77. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
78. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
79. bmp8a ENSDARG00000035677 40 1 1.000 - - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
80. zgc:154040 16 1 1.000 - - - - - - - - zgc:154040
81. lingo2 lingo2 67 1 1.000 - - - - - - - -
82. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
83. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - 1.000 - - - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
84. NPFFR1 ENSDARG00000111997 29 1 1.000 - - - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
85. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
86. foxq1a ENSDARG00000030896 121 1 1.000 - - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
87. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
88. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
89. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
90. si:dkey-40h17.5 si:dkey-40h17.5 1 1 - - - - 1.000 - - - -
91. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
92. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 1.000 - - - - - - - -
93. CCDC18_1 CCDC18_1 3 1 - - - - 1.000 - - - -
94. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
95. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
96. CU929052.1 CU929052.1 642 1 1.000 - - - - - - - -
97. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
98. rad9b ENSDARG00000075632 1 1 - - - - 1.000 - - - - RAD9 checkpoint clamp component B [Source:ZFIN;Acc:ZDB-GENE-040910-3]
99. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
100. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]

There are 193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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