Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-235f1.3

Gene Name Gene ID Reads Annotation
si:ch211-235f1.3 ENSDARG00000095179 27 si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]










Genes with expression patterns similar to si:ch211-235f1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-235f1.3 ENSDARG00000095179 27 7 - 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
2. NLRC5 ENSDARG00000024631 11 2.459 - 0.712 - 0.981 - 0.766 - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
3. MSH4 ENSDARG00000075826 37 2.44 - 0.712 - - - - 1.000 - 0.728 mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
4. cdc25d ENSDARG00000075599 7 2 - - - - - 1.000 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
5. si:dkey-26i13.6 ENSDARG00000092200 3 1.944 - 0.944 - - - - 1.000 - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
6. swsap1 ENSDARG00000093423 14 1.874 - - - - - 0.874 1.000 - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
7. ZDHHC1 ENSDARG00000077546 14 1.861 - - - - - 0.861 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
8. epha8 22 1.824 - - - 0.824 - - 1.000 - - eph receptor A8
9. BX572619.7 BX572619.7 31 1.776 - - - - - 0.861 0.915 - -
10. zgc:174712 zgc:174712 47 1.745 - - - - - 1.000 0.745 - -
11. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.712 - 0.712 - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
12. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1.712 - 0.712 - - - - 1.000 - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
13. DLK1 60 1.712 - 0.712 - - - - 1.000 - - delta like non-canonical Notch ligand 1
14. ptger4a ENSDARG00000059236 13 1.712 - 0.712 - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
15. CT583679.2 CT583679.2 10 1.711 - - - - - 0.952 0.759 - -
16. zgc:173577 ENSDARG00000098923 71 1.705 - 0.705 - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
17. lgals3bpa ENSDARG00000037805 2 1.693 - 0.712 - 0.981 - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
18. SNORA63_2 SNORA63_2 6 1.652 - - - 0.924 - - - - 0.728
19. CR759816.1 ENSDARG00000098977 27 1.636 - 0.712 - 0.924 - - - - -
20. muc13b ENSDARG00000079647 67 1.616 - 0.755 - - - - 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
21. dync2i1 dync2i1 83 1.581 - 0.836 - - - - 0.745 - -
22. HIST2H3D HIST2H3D 105 1.568 - - - - - 0.861 0.707 - -
23. DBNDD1 DBNDD1 43 1.566 - 0.712 - - - 0.854 - - -
24. adh8a ENSDARG00000091211, ENSDARG00000113750 19 1.552 - 0.823 - - - 0.729 - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
25. si:ch73-299h12.1 ENSDARG00000102321 233 1.546 - - - - - 0.826 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
26. zgc:193690 34 1.53 - 0.712 - - - - 0.818 - - zgc:193690
27. pde6a ENSDARG00000000380 40 1.512 - - - - - 0.776 0.736 - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
28. CCDC57_1 CCDC57_1 35 1.504 - - - - - 0.759 0.745 - -
29. ROCK2_1 ROCK2_1 47 1.491 - 0.712 - - - 0.779 - - -
30. C25H12orf29 C25H12orf29 31 1.485 - 0.712 - - - 0.773 - - -
31. C21H11orf82 C21H11orf82 50 1.478 - 0.712 - - - 0.766 - - -
32. CABZ01054965.1 ENSDARG00000090844 74 1.465 - 0.705 - - - - 0.760 - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
33. si:dkey-220k22.3 ENSDARG00000094693 166 1.457 - 0.712 - - - - 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
34. trim35-27 ENSDARG00000035009 62 1.416 - 0.712 - - - 0.704 - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
35. CABZ01053600.1 CABZ01053600.1 0 1 - - - - - - 1.000 - -
36. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
37. DGKA DGKA 8 1 - - - - - - 1.000 - -
38. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
39. kcnh1a ENSDARG00000024167 9 1 - - - - - - 1.000 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
40. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
41. CT027762.3_1 CT027762.3_1 62 1 - - - - - 1.000 - - -
42. si:ch211-186e20.7 ENSDARG00000077960 1 1 - - - - - - 1.000 - - si:ch211-186e20.7 [Source:ZFIN;Acc:ZDB-GENE-110407-6]
43. mb21d1 ENSDARG00000021572 12 1 - - - - - - 1.000 - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
44. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
45. viml ENSDARG00000044501 5 1 - - - - - 1.000 - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
46. CR394546.2 ENSDARG00000090061 3 1 - - - - - 1.000 - - -
47. glyctk ENSDARG00000060120 143 1 - 1.000 - - - - - - - glycerate kinase [Source:ZFIN;Acc:ZDB-GENE-061013-308]
48. CABZ01085054.1 CABZ01085054.1 20 1 - - - - - - 1.000 - -
49. znf330 ENSDARG00000020494 3 1 - - - - - - 1.000 - - zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
50. BBX ENSDARG00000012699 79 1 - - - - - - 1.000 - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
51. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
52. lctlb ENSDARG00000016337 35 1 - - - - - - 1.000 - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
53. VWDE ENSDARG00000103443 10 1 - - - - - - 1.000 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
54. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - 1.000 - -
55. ugt5d1 ENSDARG00000002394 5 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
56. si:ch211-51o18.2 si:ch211-51o18.2 111 1 - 1.000 - - - - - - -
57. wu:fe38f03 wu:fe38f03 22 1 - 1.000 - - - - - - -
58. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
59. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
60. arsk ENSDARG00000059714, ENSDARG00000115105 31 1 - - - - - - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
61. sema3h ENSDARG00000042616 75 1 - - - - - - 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
62. C11H3orf83 C11H3orf83 30 1 - - - - - 1.000 - - -
63. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
64. AP5Z1 ENSDARG00000078111 91 1 - - - - - - 1.000 - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
65. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
66. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
67. mipol1 ENSDARG00000104845 6 1 - - - - - - 1.000 - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
68. crfb16 ENSDARG00000075181 40 1 - - - - - - 1.000 - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
69. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
70. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
71. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - - 1.000 - - - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
72. fam169b ENSDARG00000069321 5 1 - - - - - 1.000 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
73. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
74. SYDE1 ENSDARG00000077440 4 1 - - - - - 1.000 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
75. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - 1.000 - -
76. zgc:112242 11 1 - - - - - - 1.000 - - zgc:112242
77. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
78. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
79. zgc:163061_1 ENSDARG00000075538, ENSDARG00000076766 18 1 - - - - - 1.000 - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
80. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 - - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
81. slc5a12 ENSDARG00000005004 15 1 - - - - - 1.000 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
82. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - - - 1.000 - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
83. FRMPD1 34 1 - - - - - - 1.000 - - FERM and PDZ domain containing 1, transcript variant X3
84. zgc:113263 ENSDARG00000045842 51 1 - - - - - - 1.000 - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
85. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
86. CDHR5 CDHR5 2 1 - - - - - - 1.000 - -
87. tph2 ENSDARG00000057239, ENSDARG00000109777 55 1 - - - - - - 1.000 - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
88. ifit2 ifit2 11 1 - - - - - - 1.000 - -
89. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
90. GPR35_1 GPR35_1 1 1 - - - - - 1.000 - - -
91. bbs9 ENSDARG00000079217 4 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
92. LRTM1 ENSDARG00000098742 21 1 - - - - - - 1.000 - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
93. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
94. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 1 - - - - - 1.000 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
95. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - - 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
96. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
97. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
98. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
99. tmem237a ENSDARG00000041735 13 1 - - - - - 1.000 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
100. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]

There are 957 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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