Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-235f1.3

Gene Name Gene ID Reads Annotation
si:ch211-235f1.3 ENSDARG00000095179 27 si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]










Genes with expression patterns similar to si:ch211-235f1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-235f1.3 ENSDARG00000095179 27 7 - 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
2. NLRC5 ENSDARG00000024631 11 2.459 - 0.712 - 0.981 - 0.766 - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
3. MSH4 ENSDARG00000075826 37 2.44 - 0.712 - - - - 1.000 - 0.728 mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
4. cdc25d ENSDARG00000075599 7 2 - - - - - 1.000 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
5. si:dkey-26i13.6 ENSDARG00000092200 3 1.944 - 0.944 - - - - 1.000 - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
6. swsap1 ENSDARG00000093423 14 1.874 - - - - - 0.874 1.000 - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
7. ZDHHC1 ENSDARG00000077546 14 1.861 - - - - - 0.861 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
8. epha8 22 1.824 - - - 0.824 - - 1.000 - - eph receptor A8
9. BX572619.7 BX572619.7 31 1.776 - - - - - 0.861 0.915 - -
10. zgc:174712 zgc:174712 47 1.745 - - - - - 1.000 0.745 - -
11. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.712 - 0.712 - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
12. ptger4a ENSDARG00000059236 13 1.712 - 0.712 - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
13. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1.712 - 0.712 - - - - 1.000 - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
14. DLK1 60 1.712 - 0.712 - - - - 1.000 - - delta like non-canonical Notch ligand 1
15. CT583679.2 CT583679.2 10 1.711 - - - - - 0.952 0.759 - -
16. zgc:173577 ENSDARG00000098923 71 1.705 - 0.705 - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
17. lgals3bpa ENSDARG00000037805 2 1.693 - 0.712 - 0.981 - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
18. SNORA63_2 SNORA63_2 6 1.652 - - - 0.924 - - - - 0.728
19. CR759816.1 ENSDARG00000098977 27 1.636 - 0.712 - 0.924 - - - - -
20. muc13b ENSDARG00000079647 67 1.616 - 0.755 - - - - 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
21. dync2i1 dync2i1 83 1.581 - 0.836 - - - - 0.745 - -
22. HIST2H3D HIST2H3D 105 1.568 - - - - - 0.861 0.707 - -
23. DBNDD1 DBNDD1 43 1.566 - 0.712 - - - 0.854 - - -
24. adh8a ENSDARG00000091211, ENSDARG00000113750 19 1.552 - 0.823 - - - 0.729 - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
25. si:ch73-299h12.1 ENSDARG00000102321 233 1.546 - - - - - 0.826 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
26. zgc:193690 34 1.53 - 0.712 - - - - 0.818 - - zgc:193690
27. pde6a ENSDARG00000000380 40 1.512 - - - - - 0.776 0.736 - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
28. CCDC57_1 CCDC57_1 35 1.504 - - - - - 0.759 0.745 - -
29. ROCK2_1 ROCK2_1 47 1.491 - 0.712 - - - 0.779 - - -
30. C25H12orf29 C25H12orf29 31 1.485 - 0.712 - - - 0.773 - - -
31. C21H11orf82 C21H11orf82 50 1.478 - 0.712 - - - 0.766 - - -
32. CABZ01054965.1 ENSDARG00000090844 74 1.465 - 0.705 - - - - 0.760 - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
33. si:dkey-220k22.3 ENSDARG00000094693 166 1.457 - 0.712 - - - - 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
34. trim35-27 ENSDARG00000035009 62 1.416 - 0.712 - - - 0.704 - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
35. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
36. CT030712.1 ENSDARG00000044355 83 1 - - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
37. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
38. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
39. rab42a ENSDARG00000034215 692 1 - 1.000 - - - - - - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
40. CR354540.1 ENSDARG00000004051 10 1 - - - - - - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
41. tmem178 ENSDARG00000020758 77 1 - - - - - - 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
42. si:dkey-28d5.2 si:dkey-28d5.2 2 1 - - - - - - 1.000 - -
43. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
44. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
45. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
46. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
47. anpepa ENSDARG00000041083, ENSDARG00000111591 5 1 - - - - - 1.000 - - - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
48. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
49. U6_18 U6_18 12 1 - - - - - - 1.000 - -
50. zgc:110249 ENSDARG00000035221 68 1 - - - - - - 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
51. si:dkey-1h24.6 ENSDARG00000092653 13 1 - - - - - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
52. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - - 1.000 - - - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
53. CR753866.2 CR753866.2 6 1 - 1.000 - - - - - - -
54. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
55. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
56. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
57. BX640584.1 ENSDARG00000100855 1 1 - - - - - - 1.000 - -
58. SNORD10 SNORD10 71 1 - 1.000 - - - - - - -
59. nrgna ENSDARG00000039626 50 1 - - - 1.000 - - - - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
60. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
61. c1ql3b ENSDARG00000028521, ENSDARG00000036483 40 1 - 1.000 - - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
62. bckdhb ENSDARG00000014676 17 1 - - - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
63. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
64. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - 1.000 - - -
65. CR753886.1 ENSDARG00000090548 22 1 - - - - - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
66. RNF122 RNF122 29 1 - - - - - - 1.000 - -
67. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - - - 1.000 - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
68. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
69. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
70. CU367845.1_1 CU367845.1_1 43 1 - - - - - - 1.000 - -
71. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
72. CU652893.1 ENSDARG00000104131 3 1 - - - - - - 1.000 - -
73. si:dkey-267i17.3 si:dkey-267i17.3 4 1 - - - - - - 1.000 - -
74. DGKA DGKA 8 1 - - - - - - 1.000 - -
75. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
76. Metazoa_SRP_30 Metazoa_SRP_30 10 1 - 1.000 - - - - - - -
77. TRIM14_5 TRIM14_5 2 1 - - - - - - 1.000 - -
78. si:dkey-66g10.2 ENSDARG00000092845 28 1 - - - - - - 1.000 - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
79. GPR35_1 GPR35_1 1 1 - - - - - 1.000 - - -
80. CU633479.6 ENSDARG00000116146 4 1 - - - - - - 1.000 - -
81. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - - - 1.000 - -
82. C11H3orf83 C11H3orf83 30 1 - - - - - 1.000 - - -
83. CABZ01038329.1 CABZ01038329.1 8 1 - - - - - - 1.000 - -
84. ifit2 ifit2 11 1 - - - - - - 1.000 - -
85. ftr26_1 ENSDARG00000092961 1 1 - - - - - 1.000 - - - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
86. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
87. BX537350.1 BX537350.1 8 1 - - - - - - 1.000 - -
88. upp2 ENSDARG00000036833 1 1 - - - - - - 1.000 - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
89. C1S_1 C1S_1 11 1 - - - - - - 1.000 - -
90. mfsd6l ENSDARG00000014761 60 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
91. sinup ENSDARG00000017163 5 1 - - - - - - 1.000 - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
92. col17a1a ENSDARG00000069415 52 1 - - - - - - 1.000 - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
93. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
94. CR854855.2 CR854855.2 1 1 - - - - - 1.000 - - -
95. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
96. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
97. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 1 - - - - - 1.000 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
98. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
99. CABZ01085054.1 CABZ01085054.1 20 1 - - - - - - 1.000 - -
100. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -

There are 957 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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