Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-235f1.3

Gene Name Gene ID Reads Annotation
si:ch211-235f1.3 ENSDARG00000095179 27 si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]










Genes with expression patterns similar to si:ch211-235f1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-235f1.3 ENSDARG00000095179 27 7 - 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
2. NLRC5 ENSDARG00000024631 11 2.459 - 0.712 - 0.981 - 0.766 - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
3. MSH4 ENSDARG00000075826 37 2.44 - 0.712 - - - - 1.000 - 0.728 mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
4. cdc25d ENSDARG00000075599 7 2 - - - - - 1.000 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
5. si:dkey-26i13.6 ENSDARG00000092200 3 1.944 - 0.944 - - - - 1.000 - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
6. swsap1 ENSDARG00000093423 14 1.874 - - - - - 0.874 1.000 - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
7. ZDHHC1 ENSDARG00000077546 14 1.861 - - - - - 0.861 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
8. epha8 22 1.824 - - - 0.824 - - 1.000 - - eph receptor A8
9. BX572619.7 BX572619.7 31 1.776 - - - - - 0.861 0.915 - -
10. zgc:174712 zgc:174712 47 1.745 - - - - - 1.000 0.745 - -
11. ptger4a ENSDARG00000059236 13 1.712 - 0.712 - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
12. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.712 - 0.712 - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
13. DLK1 60 1.712 - 0.712 - - - - 1.000 - - delta like non-canonical Notch ligand 1
14. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1.712 - 0.712 - - - - 1.000 - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
15. CT583679.2 CT583679.2 10 1.711 - - - - - 0.952 0.759 - -
16. zgc:173577 ENSDARG00000098923 71 1.705 - 0.705 - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
17. lgals3bpa ENSDARG00000037805 2 1.693 - 0.712 - 0.981 - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
18. SNORA63_2 SNORA63_2 6 1.652 - - - 0.924 - - - - 0.728
19. CR759816.1 ENSDARG00000098977 27 1.636 - 0.712 - 0.924 - - - - -
20. muc13b ENSDARG00000079647 67 1.616 - 0.755 - - - - 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
21. dync2i1 dync2i1 83 1.581 - 0.836 - - - - 0.745 - -
22. HIST2H3D HIST2H3D 105 1.568 - - - - - 0.861 0.707 - -
23. DBNDD1 DBNDD1 43 1.566 - 0.712 - - - 0.854 - - -
24. adh8a ENSDARG00000091211, ENSDARG00000113750 19 1.552 - 0.823 - - - 0.729 - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
25. si:ch73-299h12.1 ENSDARG00000102321 233 1.546 - - - - - 0.826 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
26. zgc:193690 34 1.53 - 0.712 - - - - 0.818 - - zgc:193690
27. pde6a ENSDARG00000000380 40 1.512 - - - - - 0.776 0.736 - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
28. CCDC57_1 CCDC57_1 35 1.504 - - - - - 0.759 0.745 - -
29. ROCK2_1 ROCK2_1 47 1.491 - 0.712 - - - 0.779 - - -
30. C25H12orf29 C25H12orf29 31 1.485 - 0.712 - - - 0.773 - - -
31. C21H11orf82 C21H11orf82 50 1.478 - 0.712 - - - 0.766 - - -
32. CABZ01054965.1 ENSDARG00000090844 74 1.465 - 0.705 - - - - 0.760 - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
33. si:dkey-220k22.3 ENSDARG00000094693 166 1.457 - 0.712 - - - - 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
34. trim35-27 ENSDARG00000035009 62 1.416 - 0.712 - - - 0.704 - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
35. ugt5d1 ENSDARG00000002394 5 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
36. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
37. GPR35_1 GPR35_1 1 1 - - - - - 1.000 - - -
38. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - - - 1.000 - -
39. zgc:194659 ENSDARG00000079347 17 1 - - - - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
40. notchl ENSDARG00000088308 28 1 - - - - - 1.000 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
41. ms4a17a.4 ENSDARG00000014024 36 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
42. wasa ENSDARG00000015149 26 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
43. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
44. si:dkey-85k15.4 ENSDARG00000095047 25 1 - - - - - - 1.000 - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
45. cx23 ENSDARG00000054150 115 1 - - - - - 1.000 - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
46. zgc:110249 ENSDARG00000035221 68 1 - - - - - - 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
47. wu:fe38f03 wu:fe38f03 22 1 - 1.000 - - - - - - -
48. abcc12 ENSDARG00000013050 27 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
49. FHDC1_3 FHDC1_3 66 1 - - - - - - 1.000 - -
50. IQCG ENSDARG00000068678 77 1 - - - - - - 1.000 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
51. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1 - - - - - 1.000 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
52. il34 ENSDARG00000091003 14 1 - - - - - - 1.000 - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
53. CR854855.2 CR854855.2 1 1 - - - - - 1.000 - - -
54. BX664625.1 ENSDARG00000043131 8 1 - - - - - - 1.000 - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
55. irf10 ENSDARG00000027658 7 1 - - - - - - 1.000 - - interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
56. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - - - 1.000 - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
57. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - 1.000 - -
58. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
59. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
60. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - 1.000 - -
61. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -
62. SYDE1 ENSDARG00000077440 4 1 - - - - - 1.000 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
63. CU633991.1 CU633991.1 16 1 - - - - - - 1.000 - -
64. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
65. ftr26_1 ENSDARG00000092961 1 1 - - - - - 1.000 - - - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
66. U1_41 U1_41 1 1 - - - - - 1.000 - - -
67. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
68. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - - - 1.000 - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
69. CDH12_1 CDH12_1 57 1 - 1.000 - - - - - - -
70. TRIM14_5 TRIM14_5 2 1 - - - - - - 1.000 - -
71. anpepa ENSDARG00000041083, ENSDARG00000111591 5 1 - - - - - 1.000 - - - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
72. tacr3l ENSDARG00000003054 10 1 - - - - - - 1.000 - - tachykinin receptor 3-like [Source:ZFIN;Acc:ZDB-GENE-061207-19]
73. arsk ENSDARG00000059714, ENSDARG00000115105 31 1 - - - - - - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
74. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
75. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
76. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
77. lyve1b ENSDARG00000062483 14 1 - - - - - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
78. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
79. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 - - - - - 1.000 - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
80. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
81. ENSDARG00000089100 ENSDARG00000089100 5 1 - - - - - - 1.000 - -
82. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
83. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
84. ccdc85a ENSDARG00000039497 24 1 - - - - - - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
85. CABZ01085054.1 CABZ01085054.1 20 1 - - - - - - 1.000 - -
86. stx17 ENSDARG00000006869 24 1 - - - - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
87. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
88. c1ql3b ENSDARG00000028521, ENSDARG00000036483 40 1 - 1.000 - - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
89. C1S_1 C1S_1 11 1 - - - - - - 1.000 - -
90. reep6 ENSDARG00000087349 0 1 - - - - - - 1.000 - - receptor accessory protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-98]
91. tmem237a ENSDARG00000041735 13 1 - - - - - 1.000 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
92. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
93. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
94. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
95. si:dkey-261j4.4 ENSDARG00000035150 32 1 - - - - - 1.000 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
96. zgc:172271 ENSDARG00000013240 2 1 - - - - - - 1.000 - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
97. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
98. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1 - - - - - - 1.000 - - zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
99. CACNA1E 18 1 - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6
100. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]

There are 957 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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