Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-234c11.1

Gene Name Gene ID Reads Annotation
si:ch211-234c11.1 si:ch211-234c11.1 3










Genes with expression patterns similar to si:ch211-234c11.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-234c11.1 si:ch211-234c11.1 3 4 - - 1.000 1.000 - - - 1.000 1.000
2. si:dkeyp-8f4.7 si:dkeyp-8f4.7 1 2 - - 1.000 1.000 - - - - -
3. si:ch211-187f22.2 si:ch211-187f22.2 7 1.847 - - 1.000 - - - - - 0.847
4. grm1a ENSDARG00000026796 9 1.7 - - 1.000 - - - - 0.700 - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
5. ZNF135_1 ZNF135_1 1 1 - - 1.000 - - - - - -
6. BX088551.1 BX088551.1 0 1 - - 1.000 - - - - - -
7. CABZ01109624.1 CABZ01109624.1 25 1 - - - - - - - 1.000 -
8. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - - - 1.000 - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
9. RBBP6_11 RBBP6_11 6 1 - - 1.000 - - - - - -
10. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - 1.000 - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
11. HTRA2_7 HTRA2_7 1 1 - - 1.000 - - - - - -
12. rln3a ENSDARG00000070780 2 1 - - 1.000 - - - - - - relaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
13. ENSDARG00000002498 ENSDARG00000002498 1 1 - - - - - - - 1.000 -
14. ZNF337_14 ZNF337_14 4 1 - - - 1.000 - - - - -
15. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - 1.000 - - - - - -
16. UNC5CL UNC5CL 4 1 - - 1.000 - - - - - -
17. ZNRF4 ZNRF4 16 1 - - - 1.000 - - - - -
18. snoU13 snoU13 2 1 - - - - - - - 1.000 -
19. ZNF70_10 ZNF70_10 0 1 - - 1.000 - - - - - -
20. gdf10a ENSDARG00000095378 12 1 - - - 1.000 - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
21. ttll5 ENSDARG00000036793 4 1 - - - 1.000 - - - - - tubulin tyrosine ligase-like family, member 5 [Source:ZFIN;Acc:ZDB-GENE-100922-236]
22. celsr3 ENSDARG00000055825 1 1 - - 1.000 - - - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
23. apba2b ENSDARG00000060639 2 1 - - - - - - - 1.000 - amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
24. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - 1.000 - - - - - -
25. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - 1.000 - - - - - -
26. nsmfb ENSDARG00000101234 4 1 - - - - - - - 1.000 - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
27. smpd3 ENSDARG00000098226 1 1 - - 1.000 - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
28. zgc:172139 ENSDARG00000068830 10 1 - - - - - - - 1.000 - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
29. pip4k2ab ENSDARG00000063544 1 1 - - - - - - - 1.000 - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
30. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - - - - - - 1.000 -
31. ZNF70_9 ZNF70_9 1 1 - - - - - - - 1.000 -
32. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - - 1.000 - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
33. cacng5a ENSDARG00000003326 17 1 - - - 1.000 - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
34. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - 1.000 - - - - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
35. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - 1.000 - - - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
36. abca4a ENSDARG00000057169 27 1 - - - - - - - 1.000 - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
37. dnah7l dnah7l 2 1 - - 1.000 - - - - - -
38. fam207a_1 ENSDARG00000071500 1 1 - - 1.000 - - - - - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
39. igsf21b ENSDARG00000056084 6 1 - - - 1.000 - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
40. si:dkey-187i8.2 ENSDARG00000096624 8 1 - - 1.000 - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
41. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - 1.000 - - - - - -
42. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 1 - - 1.000 - - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
43. si:dkey-246e3.4 ENSDARG00000086390 50 1 - - 1.000 - - - - - - si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
44. plcb4 1 1 - - 1.000 - - - - - - phospholipase C, beta 4
45. spc24 ENSDARG00000093622 9 1 - - 1.000 - - - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-456]
46. calhm1 ENSDARG00000077021 2 1 - - - - - - - 1.000 - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
47. frmd4bb ENSDARG00000076496 18 1 - - 1.000 - - - - - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
48. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - - - 1.000 - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
49. tectb ENSDARG00000045268 3 1 - - 1.000 - - - - - - tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
50. gcdhl gcdhl 38 1 - - 1.000 - - - - - -
51. TMEM121 TMEM121 4 1 - - - - - - - 1.000 -
52. hs3st4 ENSDARG00000052648 6 1 - - 1.000 - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
53. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 - - - 1.000 - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
54. si:dkey-22l1.1 ENSDARG00000096743 5 1 - - - - - - - 1.000 - si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
55. cyp7a1a cyp7a1a 1 1 - - 1.000 - - - - - -
56. si:dkey-211g8.4 ENSDARG00000094230 6 1 - - - - - - - 1.000 - si:dkey-211g8.4 [Source:ZFIN;Acc:ZDB-GENE-060503-624]
57. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - - 1.000 - - - - - -
58. fank1 ENSDARG00000039657 9 1 - - - 1.000 - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
59. NAGS ENSDARG00000077193 8 1 - - - - - - - 1.000 - N-acetylglutamate synthase [Source:ZFIN;Acc:ZDB-GENE-121219-2]
60. OGFR ENSDARG00000037837 4 1 - - 1.000 - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
61. si:ch211-245n8.2 si:ch211-245n8.2 0 1 - - 1.000 - - - - - -
62. CACNA1F CACNA1F 2 1 - - 1.000 - - - - - -
63. tecpr1a ENSDARG00000062515 7 1 - - 1.000 - - - - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
64. pcdh1g22 ENSDARG00000103013 3 1 - - - - - - - 1.000 - protocadherin 1 gamma 22 [Source:ZFIN;Acc:ZDB-GENE-030131-2695]
65. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
66. PEG3_33 PEG3_33 0 1 - - 1.000 - - - - - -
67. si:rp71-36n21.1 93 1 - - 1.000 - - - - - - si:rp71-36n21.1
68. ENSDARG00000043008 ENSDARG00000043008 8 1 - - - - - - - 1.000 -
69. MDFI ENSDARG00000089564 8 1 - - - - - - - 1.000 - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
70. fkrp ENSDARG00000100467 0 1 - - 1.000 - - - - - - fukutin related protein [Source:ZFIN;Acc:ZDB-GENE-070412-4]
71. pcdh2g5 1 1 - - - - - - - 1.000 - protocadherin 2 gamma 5
72. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - - - - - 1.000 - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
73. efna5b ENSDARG00000098625 1 1 - - 1.000 - - - - - - ephrin-A5b [Source:ZFIN;Acc:ZDB-GENE-980526-186]
74. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
75. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - - - - 1.000 - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
76. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - 1.000 - - - - - - tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
77. sbno1 ENSDARG00000099080 10 1 - - - - - - - 1.000 - strawberry notch homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080522-2]
78. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - 1.000 - - - - -
79. kmo ENSDARG00000009160 7 1 - - - 1.000 - - - - - kynurenine 3-monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030424-4]
80. ENSDARG00000063362 ENSDARG00000063362 0 1 - - 1.000 - - - - - -
81. dpyda dpyda 12 1 - - - 1.000 - - - - -
82. N4BP3 ENSDARG00000060007 0 1 - - 1.000 - - - - - - NEDD4 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-141216-2]
83. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - 1.000 - - - - - -
84. si:dkey-97l20.1 si:dkey-97l20.1 1 1 - - - 1.000 - - - - -
85. st8sia3 ENSDARG00000045301 3 1 - - - 1.000 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
86. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
87. si:dkey-97a13.12 ENSDARG00000095649 14 1 - - - 1.000 - - - - - si:dkey-97a13.12 [Source:ZFIN;Acc:ZDB-GENE-070912-614]
88. AC024175.11 AC024175.11 12 1 - - - - - - - 1.000 -
89. CU896691.2 ENSDARG00000097611 2 1 - - - 1.000 - - - - -
90. ZNF608 3 1 - - 1.000 - - - - - - zinc finger protein 608, transcript variant X2
91. ednrb1b ednrb1b 0 1 - - 1.000 - - - - - -
92. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
93. AADAT ENSDARG00000011410 4 1 - - - - - - - 1.000 - aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
94. SNORD18_2 SNORD18_2 7 1 - - - - - - - 1.000 -
95. BX511182.1 BX511182.1 8 1 - - - - - - - 1.000 -
96. PFKL PFKL 9 1 - - - 1.000 - - - - -
97. BX323882.1 ENSDARG00000101656 2 1 - - 1.000 - - - - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
98. pin1 ENSDARG00000101915 1 1 - - - - - - - 1.000 - peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1714]
99. p2rx7 ENSDARG00000042440, ENSDARG00000116000 0 1 - - 1.000 - - - - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:ZFIN;Acc:ZDB-GENE-030319-6]
100. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - 1.000 -

There are 251 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA