Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-233f10.6

Gene Name Gene ID Reads Annotation
si:ch211-233f10.6 si:ch211-233f10.6 2










Genes with expression patterns similar to si:ch211-233f10.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-233f10.6 si:ch211-233f10.6 2 2 - - 1.000 - - - - 1.000 -
2. KCNJ12_1 KCNJ12_1 14 1.812 - - 1.000 - - - - 0.812 -
3. CABZ01020188.1 CABZ01020188.1 61 1.469 - - 0.762 - - - - 0.707 -
4. CU468142.1 CU468142.1 6 1 - - 1.000 - - - - - -
5. PKDCC PKDCC 14 1 - - - - - - - 1.000 -
6. si:dkey-71l1.1 ENSDARG00000052411 11 1 - - - - - - - 1.000 - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
7. hel_dr4 hel_dr4 12 1 - - 1.000 - - - - - -
8. si:dkey-7m11.1 si:dkey-7m11.1 1 1 - - - - - - - 1.000 -
9. CR749741.2 CR749741.2 15 1 - - 1.000 - - - - - -
10. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 1 - - 1.000 - - - - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
11. SPTBN4 ENSDARG00000092624 6 1 - - - - - - - 1.000 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
12. Metazoa_SRP_10 Metazoa_SRP_10 5 1 - - 1.000 - - - - - -
13. BX901889.3 ENSDARG00000079242 1 1 - - 1.000 - - - - - -
14. CU468012.1 ENSDARG00000077794 3 1 - - - - - - - 1.000 -
15. lrguk ENSDARG00000069698 5 1 - - - - - - - 1.000 - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
16. ACP2 ENSDARG00000007244 6 1 - - 1.000 - - - - - - acid phosphatase 2, lysosomal [Source:ZFIN;Acc:ZDB-GENE-050306-40]
17. crygs4 ENSDARG00000010701, ENSDARG00000116551 7 1 - - - - - - - 1.000 - crystallin, gamma S4 [Source:ZFIN;Acc:ZDB-GENE-050223-2]
18. TMEM150B TMEM150B 1 1 - - - - - - - 1.000 -
19. plekhs1 ENSDARG00000079227 4 1 - - - - - - - 1.000 - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
20. SLC22A7 SLC22A7 3 1 - - - - - - - 1.000 -
21. si:dkey-14k9.2 1 1 - - 1.000 - - - - - - si:dkey-14k9.2, transcript variant X1
22. CABZ01118678.1 ENSDARG00000091359 2 1 - - - - - - - 1.000 - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
23. GANAB ENSDARG00000076811 1 1 - - 1.000 - - - - - - glucosidase, alpha; neutral AB [Source:ZFIN;Acc:ZDB-GENE-110930-9]
24. FP245465.3 FP245465.3 5 1 - - 1.000 - - - - - -
25. CABZ01002768.1 ENSDARG00000098901 2 1 - - 1.000 - - - - - -
26. greb1l_1 ENSDARG00000039196 8 1 - - 1.000 - - - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
27. fam166b ENSDARG00000100292 14 1 - - 1.000 - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
28. Metazoa_SRP_16 Metazoa_SRP_16 2 1 - - 1.000 - - - - - -
29. FBXO40_1 FBXO40_1 59 1 - - 1.000 - - - - - -
30. BX569778.1 BX569778.1 36 1 - - 1.000 - - - - - -
31. cpa2 ENSDARG00000010146 28 1 - - 1.000 - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
32. gda ENSDARG00000002986 9 1 - - - - - - - 1.000 - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
33. fbln1 ENSDARG00000103311 2 1 - - - - - - - 1.000 - fibulin 1 [Source:NCBI gene;Acc:30240]
34. U8 U8 11 1 - - - - - - - 1.000 -
35. lepa ENSDARG00000091085 11 1 - - - - - - - 1.000 - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
36. BX957353.1 BX957353.1 10 1 - - 1.000 - - - - - -
37. PDE1C_1 PDE1C_1 2 1 - - - - - - - 1.000 -
38. zgc:114118 ENSDARG00000052222, ENSDARG00000114274 2 1 - - 1.000 - - - - - - zgc:114118 [Source:ZFIN;Acc:ZDB-GENE-050913-57]
39. abcc12 ENSDARG00000013050 27 0.995 - - 0.995 - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
40. si:ch73-287n15.1 si:ch73-287n15.1 20 0.993 - - - - - - - 0.993 -
41. piwil1 ENSDARG00000041699 21 0.989 - - - - - - - 0.989 - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
42. SLX1A SLX1A 15 0.989 - - 0.989 - - - - - -
43. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.986 - - 0.986 - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
44. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.986 - - 0.986 - - - - - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
45. KBTBD13 ENSDARG00000076449 10 0.986 - - 0.986 - - - - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
46. pofut2 ENSDARG00000045175 6 0.986 - - 0.986 - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
47. C7H15orf43 C7H15orf43 10 0.985 - - - - - - - 0.985 -
48. DYDC2 ENSDARG00000101848 2 0.98 - - 0.980 - - - - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
49. CR854948.2 CR854948.2 4 0.979 - - 0.979 - - - - - -
50. si:ch73-92e7.1 si:ch73-92e7.1 1 0.975 - - 0.975 - - - - - -
51. rassf4 ENSDARG00000012460 43 0.971 - - 0.971 - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
52. SLITRK3 SLITRK3 24 0.971 - - 0.971 - - - - - -
53. si:ch211-62a1.3 ENSDARG00000112419 8 0.97 - - - - - - - 0.970 - si:ch211-62a1.3 [Source:ZFIN;Acc:ZDB-GENE-061207-41]
54. PEG3_37 PEG3_37 4 0.949 - - - - - - - 0.949 -
55. TMEM136 TMEM136 13 0.946 - - 0.946 - - - - - -
56. CT030048.2 CT030048.2 3 0.943 - - - - - - - 0.943 -
57. SNORA31 SNORA31 23 0.943 - - - - - - - 0.943 -
58. TRIM35_1 TRIM35_1 11 0.94 - - - - - - - 0.940 -
59. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 0.936 - - - - - - - 0.936 - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
60. si:ch211-132b12.7 ENSDARG00000068374 30 0.934 - - - - - - - 0.934 - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
61. GJD4 ENSDARG00000116895 139 0.93 - - - - - - - 0.930 - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
62. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.925 - - 0.925 - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
63. CABZ01002626.1 CABZ01002626.1 29 0.925 - - 0.925 - - - - - -
64. si:dkey-241l7.6 ENSDARG00000041248 5 0.922 - - 0.922 - - - - - - si:dkey-241l7.6 [Source:ZFIN;Acc:ZDB-GENE-041014-235]
65. ZC3H12A ENSDARG00000005271 5 0.917 - - 0.917 - - - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
66. CU468896.2 CU468896.2 38 0.908 - - 0.908 - - - - - -
67. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 0.908 - - 0.908 - - - - - -
68. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 0.905 - - 0.905 - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
69. cd74a ENSDARG00000009087 20 0.905 - - 0.905 - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
70. SSTR2 SSTR2 12 0.905 - - 0.905 - - - - - -
71. si:dkey-78a14.5 14 0.899 - - - - - - - 0.899 - si:dkey-78a14.5, transcript variant X2
72. CABZ01054394.1 ENSDARG00000090942 12 0.899 - - 0.899 - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
73. tdrd7 tdrd7 31 0.895 - - - - - - - 0.895 -
74. zgc:174972 ENSDARG00000087933 15 0.894 - - 0.894 - - - - - - zgc:174972 [Source:ZFIN;Acc:ZDB-GENE-080219-6]
75. scd ENSDARG00000033662 146 0.884 - - - - - - - 0.884 - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
76. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 0.884 - - 0.884 - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
77. nadka ENSDARG00000006577, ENSDARG00000098313 5 0.883 - - 0.883 - - - - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
78. NETO2_1 NETO2_1 15 0.882 - - - - - - - 0.882 -
79. FP085392.1 FP085392.1 12 0.879 - - - - - - - 0.879 -
80. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 0.874 - - 0.874 - - - - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
81. si:dkeyp-69e1.9 si:dkeyp-69e1.9 29 0.869 - - 0.869 - - - - - -
82. ftr14 ENSDARG00000053293 77 0.866 - - 0.866 - - - - - - finTRIM family, member 14 [Source:ZFIN;Acc:ZDB-GENE-060512-201]
83. CABZ01074397.1 ENSDARG00000104672 2 0.862 - - - - - - - 0.862 - NACHT, LRR and PYD domains-containing protein 3-like [Source:NCBI gene;Acc:100535428]
84. si:dkey-43b14.6 si:dkey-43b14.6 20 0.859 - - - - - - - 0.859 -
85. CT027674.1 ENSDARG00000106606 11 0.859 - - 0.859 - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
86. gcga ENSDARG00000079296 70 0.852 - - 0.852 - - - - - - glucagon a [Source:ZFIN;Acc:ZDB-GENE-010219-1]
87. PHYH ENSDARG00000086740 15 0.852 - - - - - - - 0.852 - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
88. CR790363.3 CR790363.3 5 0.85 - - - - - - - 0.850 -
89. slain1b ENSDARG00000104974 61 0.846 - - 0.846 - - - - - - SLAIN motif family, member 1b [Source:ZFIN;Acc:ZDB-GENE-080516-6]
90. trpm5 ENSDARG00000059792 3 0.844 - - - - - - - 0.844 - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
91. CT573348.1 CT573348.1 37 0.844 - - 0.844 - - - - - -
92. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 0.839 - - 0.839 - - - - - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
93. C8H1orf222 C8H1orf222 36 0.837 - - - - - - - 0.837 -
94. wu:fb63a08 38 0.835 - - 0.835 - - - - - - wu:fb63a08
95. syt5a ENSDARG00000037941 81 0.83 - - 0.830 - - - - - - synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-110]
96. gabbr1b ENSDARG00000016667 14 0.819 - - - - - - - 0.819 - gamma-aminobutyric acid (GABA) B receptor, 1b [Source:ZFIN;Acc:ZDB-GENE-060503-5]
97. SYT7 SYT7 45 0.819 - - 0.819 - - - - - -
98. gem ENSDARG00000029112 138 0.815 - - - - - - - 0.815 - GTP binding protein overexpressed in skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-060825-251]
99. SORT1 SORT1 33 0.81 - - - - - - - 0.810 -
100. CBLC ENSDARG00000078217 96 0.81 - - 0.810 - - - - - - Cbl proto-oncogene C, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-080220-20]

There are 39 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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