Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-233a24.2

Gene Name Gene ID Reads Annotation
si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]










Genes with expression patterns similar to si:ch211-233a24.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
2. trim25l ENSDARG00000020863 292 1.765 - - - - - - 0.792 - 0.973 tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
3. afap1 ENSDARG00000055284 730 1.752 - - - - - 0.883 0.869 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
4. GSG2 GSG2 1162 1.738 - - - - - - 0.789 - 0.949
5. tom1 ENSDARG00000104581 1457 1.724 - - - - - 0.908 0.816 - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
6. tefb ENSDARG00000098103 370 1.705 - - - - - 0.847 0.858 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
7. si:ch211-193k19.1 ENSDARG00000035660 636 1.698 - - - - - 0.756 0.942 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
8. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.689 - - - - - 0.857 0.832 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
9. CABZ01049802.1 CABZ01049802.1 195 1.682 - - - - - 0.842 0.840 - -
10. C12H10orf118 C12H10orf118 964 1.68 - - - - - 0.827 0.853 - -
11. THEM6_1 ENSDARG00000103914 469 1.679 - - - - - 0.862 0.817 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
12. FUZ ENSDARG00000079730 821 1.676 - - - - - 0.907 0.769 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
13. guk1a ENSDARG00000030340 517 1.663 - - - - - 0.756 0.907 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
14. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.661 - - - - - 0.835 0.826 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
15. WU:FC32F04 WU:FC32F04 2525 1.65 - - - - - 0.813 - - 0.837
16. si:ch211-232i5.3 ENSDARG00000086874 1256 1.649 - - - - - 0.855 0.794 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
17. dennd1b ENSDARG00000101868 328 1.635 - - - - - 0.917 0.718 - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
18. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.626 - - - - - 0.808 0.818 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
19. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 1.621 - 0.779 - - - 0.842 - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
20. optc ENSDARG00000014358 1295 1.614 - 0.762 - - - 0.852 - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
21. tmem18 ENSDARG00000036704 1784 1.599 - - - - - 0.863 0.736 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
22. mdm4 ENSDARG00000057513 1954 1.591 - - - - - 0.714 - - 0.877 MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
23. cdc20 ENSDARG00000100741 3264 1.586 - - - - - 0.778 0.808 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
24. nos2b ENSDARG00000031976 935 1.585 - - - - - 0.810 0.775 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
25. rab9a ENSDARG00000045027 201 1.576 - - - - - 0.822 0.754 - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
26. tmem53 ENSDARG00000038789 411 1.57 - - - - - 0.845 0.725 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
27. coa5 ENSDARG00000094833 1988 1.558 - - - - - 0.792 0.766 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
28. hdac10 ENSDARG00000086458 676 1.558 - - - - - - 0.853 - 0.705 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
29. gpr143 ENSDARG00000034572 559 1.554 - - - - - 0.853 - - 0.701 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
30. pim3 ENSDARG00000055129 1517 1.538 - 0.707 - - - - - - 0.831 Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
31. klhl41a ENSDARG00000068888 1034 1.536 - 0.802 - - - - 0.734 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
32. dhrs13a.2 ENSDARG00000111240 491 1.535 - - - - - 0.810 0.725 - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
33. tmem238 tmem238 1403 1.53 - - - - - 0.733 0.797 - -
34. ptpn23a ENSDARG00000070124 1206 1.524 - - - - - 0.747 0.777 - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
35. tmem50a ENSDARG00000015757 3244 1.506 - - - - - 0.800 0.706 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
36. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.5 - 0.709 - - - 0.791 - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
37. prrx1a ENSDARG00000033971 1786 1.492 0.722 - - - - 0.770 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
38. GANAB_2 GANAB_2 3210 1.486 0.708 - - - - - 0.778 - -
39. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.482 - - - - - 0.737 0.745 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
40. rnmt ENSDARG00000070553 1743 1.473 - 0.738 - - - - 0.735 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
41. ptgs2b ENSDARG00000010276 692 1.473 - - - - - 0.730 0.743 - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
42. rac2 ENSDARG00000038010 5837 1.451 - - - - - 0.733 0.718 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
43. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.426 - 0.726 - - - 0.700 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
44. ltc4s ENSDARG00000062598 138 1.418 0.717 - - - - - - - 0.701 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
45. ankrd10b ENSDARG00000004771 654 0.973 - - - - - - - - 0.973 ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
46. pdia4 ENSDARG00000018491 1914 0.961 - - - - - - - - 0.961 protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
47. TMEM132E ENSDARG00000090830 1197 0.955 - - - - - - - - 0.955 transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
48. CLCC1 155 0.951 - - - - - - 0.951 - - chloride channel CLIC-like 1, transcript variant X2
49. atp6v0a1b ENSDARG00000015174 1052 0.95 - - - - - - - - 0.950 ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
50. znf598 ENSDARG00000014945 1838 0.95 - - - - - - - - 0.950 zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
51. apbb1 ENSDARG00000076560 1748 0.947 - - - - - - - - 0.947 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
52. gnb1a ENSDARG00000090454 481 0.941 - - - - - - 0.941 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
53. LRRC8E LRRC8E 495 0.939 - - - - - - 0.939 - -
54. samd13 ENSDARG00000062977 331 0.937 - - - - - - 0.937 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
55. celsr1a ENSDARG00000069185 1894 0.936 - - - - - - - - 0.936 cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
56. si:dkey-11f4.14 ENSDARG00000098461 35 0.934 - - - - - - 0.934 - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
57. paf1 ENSDARG00000098432 1806 0.933 - - - - - - 0.933 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
58. TMEM30B ENSDARG00000054122 1519 0.931 - - - - - - 0.931 - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
59. SH2D2A SH2D2A 31 0.931 - - - - - 0.931 - - -
60. TOB2 TOB2 254 0.924 - - - - - 0.924 - - -
61. tmem205 ENSDARG00000100677 101 0.924 - - - - - - 0.924 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
62. ubn2 ubn2 534 0.923 - - - - - - 0.923 - -
63. kbp kbp 701 0.922 - - - - - 0.922 - - -
64. zgc:171971 ENSDARG00000042054 388 0.921 - - - - - - 0.921 - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
65. ENGASE ENSDARG00000010035 232 0.92 - - - - - - 0.920 - - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
66. si:ch73-367f21.4 ENSDARG00000071097 862 0.917 - - - - - 0.917 - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
67. rnf165b ENSDARG00000078817 432 0.913 - - - - - 0.913 - - - ring finger protein 165b [Source:ZFIN;Acc:ZDB-GENE-081104-369]
68. rad18 ENSDARG00000027938 574 0.911 - - - - - - 0.911 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
69. vps11 ENSDARG00000036338 421 0.91 - - - - - - 0.910 - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
70. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 0.909 - - - - - - - - 0.909 post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
71. fbxo42 ENSDARG00000087545 262 0.909 - - - - - - 0.909 - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
72. si:ch211-127i16.1 si:ch211-127i16.1 228 0.908 - - - - - - 0.908 - -
73. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.907 - - - - - 0.907 - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
74. coro2a ENSDARG00000005210 1479 0.906 - - - - - - 0.906 - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
75. trpm4 trpm4 501 0.906 - - - - - - 0.906 - -
76. tgm5l ENSDARG00000098837 174 0.905 - - - - - - 0.905 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
77. stxbp2 ENSDARG00000007603 1646 0.902 - - - - - 0.902 - - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
78. ENSDARG00000089986 ENSDARG00000089986 308 0.902 - - - - - - 0.902 - -
79. CU929119.2 CU929119.2 859 0.902 - - - - - - 0.902 - -
80. pon3 pon3 1146 0.901 - - - - - - 0.901 - -
81. mon1a ENSDARG00000078585 554 0.899 - - - - - - 0.899 - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
82. BX000999.4 BX000999.4 206 0.899 - - - - - 0.899 - - -
83. PVRL4_1 PVRL4_1 702 0.898 - - - - - 0.898 - - -
84. gipc2 ENSDARG00000009488 672 0.898 - - - - - 0.898 - - - GIPC PDZ domain containing family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-921]
85. LAMTOR4 ENSDARG00000045542 1181 0.898 - - - - - 0.898 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7438]
86. tmem147 ENSDARG00000039913 3209 0.897 - - - - - - - - 0.897 transmembrane protein 147 [Source:ZFIN;Acc:ZDB-GENE-040718-187]
87. kctd9 kctd9 973 0.897 - - - - - 0.897 - - -
88. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 0.897 - - - - - - 0.897 - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
89. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 0.895 - - - - - - - - 0.895 tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
90. disp1 ENSDARG00000044417 603 0.894 - - - - - - 0.894 - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
91. C24H8orf44 C24H8orf44 405 0.893 - - - - - 0.893 - - -
92. smg7 ENSDARG00000060767 2759 0.892 - - - - - 0.892 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
93. CABZ01024770.1 CABZ01024770.1 150 0.891 - - - - - - 0.891 - -
94. ap5s1 ENSDARG00000076755 318 0.891 - - - - - - 0.891 - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
95. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 0.889 - - - - - - - - 0.889 erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
96. zgc:158398 ENSDARG00000074226 418 0.889 - - - - - - 0.889 - - zgc:158398 [Source:ZFIN;Acc:ZDB-GENE-070820-3]
97. mfn2 ENSDARG00000079504 726 0.888 - - - - - - 0.888 - - mitofusin 2 [Source:ZFIN;Acc:ZDB-GENE-081105-44]
98. atg5 ENSDARG00000023396 1726 0.886 - - - - - 0.886 - - - ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
99. RBM6 ENSDARG00000077060 3521 0.886 - - - - - - - - 0.886 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
100. kmt2e ENSDARG00000007523 1851 0.886 - - - - - 0.886 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]

There are 1389 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA