Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-232m10.6

Gene Name Gene ID Reads Annotation
si:ch211-232m10.6 ENSDARG00000070931 2 si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]










Genes with expression patterns similar to si:ch211-232m10.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-232m10.6 ENSDARG00000070931 2 4 1.000 - - 1.000 1.000 - - 1.000 - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
2. gria1b ENSDARG00000032714, ENSDARG00000111658 12 2 1.000 - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
3. si:dkey-179o14.4 si:dkey-179o14.4 2 2 1.000 - - 1.000 - - - - -
4. oxtrl ENSDARG00000044175 10 1.837 1.000 - - - 0.837 - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
5. klf5b ENSDARG00000062106 7 1.829 - - - 1.000 - - - 0.829 - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
6. clul1 ENSDARG00000055595 103 1.812 0.889 - - - - - - 0.923 - clusterin-like 1 (retinal) [Source:ZFIN;Acc:ZDB-GENE-031118-57]
7. lpar5b ENSDARG00000068638 2 1.746 1.000 - - - 0.746 - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
8. cart4 ENSDARG00000070142 55 1.547 - - - 0.741 0.806 - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
9. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - - 1.000 - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
10. tlr5a ENSDARG00000044415 3 1 - - - - 1.000 - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
11. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
12. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - - - 1.000 - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
13. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
14. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - 1.000 - - - - -
15. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 1.000 - - - - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
16. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 - - - - 1.000 - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
17. si:ch211-229l10.11 ENSDARG00000101223 3 1 - - - - 1.000 - - - - si:ch211-229l10.11 [Source:ZFIN;Acc:ZDB-GENE-110913-131]
18. CABZ01065246.2 CABZ01065246.2 45 1 - - - - 1.000 - - - -
19. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
20. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 1 - - - 1.000 - - - - -
21. VPS13B VPS13B 1 1 1.000 - - - - - - - -
22. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
23. BX323450.2 BX323450.2 2 1 - - - - 1.000 - - - -
24. CABZ01088691.2 CABZ01088691.2 0 1 - - - - 1.000 - - - -
25. fam129ab ENSDARG00000023053 1 1 1.000 - - - - - - - - family with sequence similarity 129, member Ab [Source:ZFIN;Acc:ZDB-GENE-070912-688]
26. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
27. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
28. ighv8-3 ENSDARG00000114819 0 1 - - - - 1.000 - - - - immunoglobulin heavy variable 8-3 [Source:ZFIN;Acc:ZDB-GENE-040514-28]
29. SYCP2L 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2-like, transcript variant X3
30. BX901974.1 ENSDARG00000067592 2 1 - - - - 1.000 - - - -
31. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - 1.000 - - - -
32. LRFN4 LRFN4 59 1 1.000 - - - - - - - -
33. Metazoa_SRP_26 Metazoa_SRP_26 0 1 - - - - 1.000 - - - -
34. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - 1.000 - - - -
35. hsf4 ENSDARG00000013251 5 1 - - - 1.000 - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
36. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
37. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
38. podn ENSDARG00000019025, ENSDARG00000113615 1 1 1.000 - - - - - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
39. si:dkey-167k11.3 si:dkey-167k11.3 3 1 1.000 - - - - - - - -
40. avp ENSDARG00000058567 4 1 - - - - 1.000 - - - - arginine vasopressin [Source:ZFIN;Acc:ZDB-GENE-030407-2]
41. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
42. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
43. ptprub_1 ENSDARG00000101081 0 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
44. zgc:173552 ENSDARG00000105345, ENSDARG00000110909, ENSDARG00000112175 0 1 - - - 1.000 - - - - - zgc:173552 [Source:ZFIN;Acc:ZDB-GENE-080220-24]
45. SLC16A7 ENSDARG00000098258 4 1 - - - - - - - 1.000 - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
46. U1_12 U1_12 0 1 - - - - 1.000 - - - -
47. PSMB11 PSMB11 3 1 - - - 1.000 - - - - -
48. PLA2G4C_2 PLA2G4C_2 10 1 - - - - 1.000 - - - -
49. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
50. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
51. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
52. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
53. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
54. tcnl ENSDARG00000068088 0 1 - - - 1.000 - - - - - transcobalamin like [Source:ZFIN;Acc:ZDB-GENE-060531-123]
55. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
56. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
57. ANO7 ANO7 54 1 1.000 - - - - - - - -
58. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
59. prph2a ENSDARG00000038018 2 1 - - - 1.000 - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
60. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 1.000 - - - - - - - -
61. spg20a 8 1 - - - 1.000 - - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
62. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
63. CR339051.1 CR339051.1 9 1 - - - 1.000 - - - - -
64. tbc1d20 ENSDARG00000032298 1 1 - - - - 1.000 - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
65. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
66. DNAI1 DNAI1 11 1 - - - - 1.000 - - - -
67. ompa ENSDARG00000105218 3 1 - - - 1.000 - - - - - olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
68. KCNK7 ENSDARG00000057331 5 1 1.000 - - - - - - - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
69. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
70. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
71. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
72. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
73. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
74. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
75. FP103005.1 ENSDARG00000099852 4 1 - - - 1.000 - - - - -
76. TRIM35 TRIM35 100 1 - - - - 1.000 - - - -
77. TMEM132A ENSDARG00000105005 4 1 - - - - 1.000 - - - - transmembrane protein 132A [Source:ZFIN;Acc:ZDB-GENE-140106-237]
78. SNORA3 SNORA3 0 1 - - - 1.000 - - - - -
79. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
80. plscr3a ENSDARG00000093078 7 1 - - - 1.000 - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
81. KIF9 ENSDARG00000031693 11 1 - - - 1.000 - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
82. AC024175.11 AC024175.11 12 1 - - - 1.000 - - - - -
83. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - 1.000 - - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
84. lrp6 ENSDARG00000100143 1 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
85. CU459095.1 CU459095.1 7 1 - - - 1.000 - - - - -
86. hs3st2 ENSDARG00000059616 2 1 - - - 1.000 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
87. si:dkey-47k20.5 ENSDARG00000115763 0 1 - - - - 1.000 - - - - si:dkey-47k20.5 [Source:ZFIN;Acc:ZDB-GENE-060503-77]
88. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - 1.000 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
89. ADAM12 ENSDARG00000116062 35 1 1.000 - - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
90. FRMD7 ENSDARG00000068958 17 1 - - - 1.000 - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
91. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - 1.000 - - - -
92. BX569789.4 BX569789.4 3 1 - - - - 1.000 - - - -
93. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
94. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
95. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
96. calhm1 ENSDARG00000077021 2 1 - - - - 1.000 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
97. iqcd ENSDARG00000035551 7 1 - - - 1.000 - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
98. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
99. si:ch73-189n23.1 ENSDARG00000086247 15 1 1.000 - - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
100. bcdin3d ENSDARG00000074111 0 1 - - - 1.000 - - - - - BCDIN3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-327]

There are 425 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA