Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-232i5.3

Gene Name Gene ID Reads Annotation
si:ch211-232i5.3 ENSDARG00000086874 1256 si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]










Genes with expression patterns similar to si:ch211-232i5.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-232i5.3 ENSDARG00000086874 1256 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
2. eppk1 ENSDARG00000096359 4315 3.22 0.752 0.822 - - - 0.873 0.773 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
3. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 2.539 - 0.770 - - - 0.892 0.877 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
4. afap1 ENSDARG00000055284 730 2.471 - 0.801 - - - 0.856 0.814 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
5. tmem18 ENSDARG00000036704 1784 2.423 - 0.775 - - - 0.842 0.806 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
6. ppl ENSDARG00000101043 9196 2.42 - - - - - 0.850 0.799 0.771 - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
7. cmasb 499 2.399 - 0.826 - - - 0.791 0.782 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
8. AIM1L AIM1L 899 2.393 - - - - - 0.757 0.762 0.874 -
9. degs2 ENSDARG00000042544 1912 2.391 0.792 - - - - 0.830 0.769 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
10. klf2b ENSDARG00000040432 1730 2.384 0.745 0.911 - - - - 0.728 - - Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
11. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 2.37 - - - - - 0.822 0.824 - 0.724 N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
12. elovl6l ENSDARG00000038639 1184 2.348 - 0.720 - - - 0.844 0.784 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
13. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 2.345 0.758 - - - - 0.841 0.746 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
14. itpkb ENSDARG00000010059 2352 2.344 0.778 0.786 - - - - - 0.780 - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
15. si:ch73-52f15.5 ENSDARG00000095400 1368 2.337 - - - - - 0.721 0.824 0.792 - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
16. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 2.302 - - - - - 0.856 0.711 0.735 - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
17. arf1 ENSDARG00000009484 5034 2.29 0.723 - - - - 0.843 0.724 - - ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
18. si:dkey-240e12.6 ENSDARG00000110137 674 2.246 - 0.761 - - - 0.724 - 0.761 - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
19. tcn2l tcn2l 2428 2.233 0.735 0.770 - - - - 0.728 - -
20. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 2.23 - 0.798 - - - 0.708 0.724 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
21. PVRL4_1 PVRL4_1 702 1.8 0.901 - - - - 0.899 - - -
22. pon3 pon3 1146 1.783 - 0.957 - - - - 0.826 - -
23. lsr ENSDARG00000099291 881 1.775 - 0.918 - - - - 0.857 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
24. TMEM54 TMEM54 1882 1.768 - 0.851 - - - - - 0.917 -
25. rac2 ENSDARG00000038010 5837 1.764 - - - - - 0.847 0.917 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
26. galnt10 ENSDARG00000103825 320 1.748 0.822 - - - - - 0.926 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
27. slc2a10 ENSDARG00000090820 637 1.746 0.877 0.869 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
28. hsd11b3a hsd11b3a 1388 1.725 - 0.866 - - - - - 0.859 -
29. C1H4orf33 C1H4orf33 2097 1.724 0.893 0.831 - - - - - - -
30. ptgs2a ENSDARG00000004539 1207 1.714 - - - - - - 0.926 0.788 - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
31. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.711 - 0.857 - - - - 0.854 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
32. galnt7 ENSDARG00000057303 2017 1.7 - - - - - 0.791 - 0.909 - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
33. rassf6 ENSDARG00000000804 1090 1.697 - 0.879 - - - 0.818 - - - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
34. pard6a ENSDARG00000069378, ENSDARG00000115700 665 1.693 0.784 - - - - 0.909 - - - par-6 family cell polarity regulator alpha [Source:ZFIN;Acc:ZDB-GENE-070705-215]
35. MGST1 MGST1 1958 1.692 - - - - - 0.811 0.881 - -
36. kremen1 ENSDARG00000062579 190 1.689 0.876 0.813 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
37. FUCA1 FUCA1 1446 1.688 0.874 - - - - 0.814 - - -
38. cd2ap ENSDARG00000015224 2830 1.687 - - - - - - 0.812 0.875 - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
39. cebpa ENSDARG00000036074 751 1.684 0.882 - - - - - - 0.802 - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
40. ormdl1 ENSDARG00000014333 1589 1.682 - 0.905 - - - - 0.777 - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
41. rab5c ENSDARG00000026712 4733 1.678 0.889 - - - - 0.789 - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
42. s100z ENSDARG00000038729 442 1.674 0.915 - - - - 0.759 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
43. rab11al ENSDARG00000014340 2116 1.672 - 0.775 - - - 0.897 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
44. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.668 - - - - - - 0.859 0.809 - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
45. sc:d173 sc:d173 1279 1.664 - 0.895 - - - - - - 0.769
46. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.663 0.718 - - - - 0.945 - - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
47. OMG OMG 1202 1.66 0.806 - - - - - 0.854 - -
48. C12H10orf118 C12H10orf118 964 1.659 - - - - - 0.906 0.753 - -
49. CLEC4A CLEC4A 1016 1.658 - 0.908 - - - - 0.750 - -
50. tmem189 ENSDARG00000042732 4004 1.655 0.760 - - - - 0.895 - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
51. znf185 ENSDARG00000103917 7195 1.652 0.807 - - - - 0.845 - - - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
52. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.649 - - - - - 0.855 0.794 - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
53. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.648 0.873 - - - - - - 0.775 - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
54. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 1.638 - - - - - 0.816 - 0.822 - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
55. ak5l ENSDARG00000017739 1058 1.637 0.778 - - - - - 0.859 - - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
56. bc2 5213 1.636 0.830 - - - - 0.806 - - - putative breast adenocarcinoma marker
57. NID2 NID2 5282 1.635 - - - - - - - 0.865 0.770
58. sptssa ENSDARG00000071203 2306 1.634 - 0.878 - - - 0.756 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
59. galnt12 ENSDARG00000055490 1653 1.634 0.855 - - - - - 0.779 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
60. itih5 ENSDARG00000045517 374 1.628 - - - - - - 0.714 0.914 - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
61. gale ENSDARG00000002401 5489 1.626 - - - - - 0.773 0.853 - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
62. tmem238 tmem238 1403 1.624 - - - - - 0.774 0.850 - -
63. tbl1xr1b ENSDARG00000008966 2203 1.622 - 0.848 - - - 0.774 - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
64. ovol1 1037 1.622 - - - - - 0.857 0.765 - - ovo-like zinc finger 1, transcript variant X1
65. stxbp2 ENSDARG00000007603 1646 1.622 - - - - - 0.829 - 0.793 - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
66. wdfy4 ENSDARG00000077009 802 1.62 - 0.784 - - - 0.836 - - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
67. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.618 - - - - - 0.791 0.827 - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
68. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.618 - 0.802 - - - - 0.816 - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
69. ctsh ENSDARG00000041108 2873 1.616 - 0.834 - - - - 0.782 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
70. cldnb ENSDARG00000009544 6036 1.615 - - - - - 0.806 0.809 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
71. bcar1 ENSDARG00000056525 6563 1.613 - - - - - 0.817 0.796 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
72. pls3 ENSDARG00000037655 5175 1.612 0.854 - - - - - 0.758 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
73. zgc:113442 ENSDARG00000101906 3092 1.612 - - - - - - 0.905 0.707 - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
74. MAL 9331 1.611 - - - - - - 0.807 0.804 - mal, T-cell differentiation protein
75. SH3D21 ENSDARG00000099448 1726 1.611 - - - - - 0.829 0.782 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
76. c3a c3a 6690 1.611 - 0.866 - - - - 0.745 - -
77. fut9 fut9 519 1.61 0.870 - - - - - 0.740 - -
78. pef1 ENSDARG00000023989 3013 1.608 - - - - - 0.800 0.808 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
79. ano1 ENSDARG00000102335 445 1.608 - 0.754 - - - - 0.854 - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
80. nos2b ENSDARG00000031976 935 1.608 - - - - - 0.784 0.824 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
81. krt17 ENSDARG00000094041 7683 1.608 - 0.782 - - - - 0.826 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
82. ywhabl ENSDARG00000040287 39045 1.607 - - - - - 0.818 0.789 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
83. kcnj1a.5 ENSDARG00000089060 617 1.606 0.757 0.849 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
84. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.606 - - - - - - 0.713 0.893 - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
85. trpm4 trpm4 501 1.604 - 0.774 - - - - 0.830 - -
86. plekhf2 ENSDARG00000021141 529 1.602 0.837 - - - - - 0.765 - - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
87. aqp3a ENSDARG00000003808 9044 1.6 - - - - - - 0.857 0.743 - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
88. slc36a1 ENSDARG00000075618 612 1.6 0.790 0.810 - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061117-1]
89. RAPGEFL1 ENSDARG00000079912 1074 1.6 - 0.776 - - - 0.824 - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
90. itgb1b.1 ENSDARG00000053232 4721 1.596 0.755 - - - - - 0.841 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
91. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.596 - 0.861 - - - - 0.735 - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
92. itgb4 ENSDARG00000028507 2568 1.594 0.808 - - - - 0.786 - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
93. jagn1b ENSDARG00000014995 2063 1.594 0.753 0.841 - - - - - - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
94. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.59 0.812 0.778 - - - - - - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
95. CU633744.1 CU633744.1 2074 1.59 - 0.777 - - - - 0.813 - -
96. QPCT ENSDARG00000089717 1383 1.589 - - - - - - - 0.851 0.738 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
97. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.587 - - - - - 0.791 0.796 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
98. adam10a ENSDARG00000053468 9308 1.582 - - - - - 0.804 0.778 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
99. kazald2 ENSDARG00000078518 3062 1.581 - - - - - - - 0.819 0.762 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
100. fam105bb fam105bb 1253 1.58 - 0.797 - - - 0.783 - - -

There are 1776 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA