Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-22i13.2

Gene Name Gene ID Reads Annotation
si:ch211-22i13.2 ENSDARG00000043485 4719 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]










Genes with expression patterns similar to si:ch211-22i13.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-22i13.2 ENSDARG00000043485 4719 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
2. snrnp70 ENSDARG00000077126 5921 3.478 0.804 0.768 - - 0.976 - 0.930 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
3. lsm7 ENSDARG00000058328 7191 2.499 0.851 - - - 0.808 - 0.840 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
4. acp1 ENSDARG00000076486 3275 2.395 - 0.736 - - - 0.744 0.915 - - acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
5. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 2.378 - - - - 0.839 0.708 - 0.831 - RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
6. DYNC1I2 DYNC1I2 4131 2.289 - 0.709 0.704 - - - 0.876 - -
7. prmt1 ENSDARG00000010246 11311 2.254 - 0.767 - - - - - 0.713 0.774 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
8. gli2b ENSDARG00000020884 1468 1.938 - - - - 0.968 - - - 0.970 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
9. cdc14b ENSDARG00000021483 4958 1.902 - - - - 0.967 - 0.935 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
10. atf6 ENSDARG00000012656 3873 1.886 - - - - - - 0.913 - 0.973 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
11. ppp2r2d ENSDARG00000102009 5710 1.88 - - - - 0.962 - - - 0.918 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
12. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.88 - - - - - - 0.911 - 0.969 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
13. kansl3 ENSDARG00000029556 2487 1.877 - - - - 0.952 - 0.925 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
14. itpkcb ENSDARG00000067741 2370 1.874 - - - - - - 0.910 - 0.964 inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
15. tyms ENSDARG00000042894 3068 1.874 - - - - 0.973 - 0.901 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
16. klc2 3058 1.873 - - - - 0.963 - 0.910 - - kinesin light chain 2
17. ap1b1 ENSDARG00000020621 3874 1.866 - - - - 0.942 - 0.924 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
18. zgc:162816 ENSDARG00000070416 974 1.861 - - - - 0.965 - 0.896 - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
19. scaf11 ENSDARG00000045885 3531 1.858 - - - - - - 0.908 - 0.950 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
20. abl1 ENSDARG00000035187 3553 1.854 - - - - 0.972 - 0.882 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
21. ef1 1343 1.841 - - - - - - 0.879 - 0.962 E74-like factor 1 (ets domain transcription factor), transcript variant X4
22. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.836 - - - - - - 0.884 - 0.952 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
23. ankrd13c ENSDARG00000103831 3593 1.833 - - - - 0.956 - 0.877 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
24. zdhhc5a ENSDARG00000016263 625 1.83 - - - - 0.929 - 0.901 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
25. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.816 - - - - - - 0.950 - 0.866 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
26. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 1.809 - - - - - - 0.865 - 0.944 dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
27. tpd52l2b ENSDARG00000013655 9460 1.806 - - - - - - 0.882 - 0.924 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
28. rab11ba ENSDARG00000041878 4651 1.791 - - - - 0.933 - 0.858 - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
29. zgc:56530 zgc:56530 6300 1.787 - - - - 0.961 - - - 0.826
30. rtn3_1 ENSDARG00000091348 3290 1.78 - - - - 0.953 0.827 - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
31. zgc:63587 ENSDARG00000017140 8399 1.775 - - - - - - 0.936 - 0.839 zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
32. wipi1 ENSDARG00000040657 2732 1.749 - - - - - - 0.915 - 0.834 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
33. ywhah ENSDARG00000005560 11079 1.749 - - - - - - 0.847 - 0.902 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
34. boc ENSDARG00000074335 4832 1.747 - - - - 0.958 - - - 0.789 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
35. ube2e1 ENSDARG00000116649 10656 1.736 - - - - 0.824 - 0.912 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
36. cdkn2aipnl ENSDARG00000053395 5107 1.736 - 0.785 - - - - 0.951 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
37. cdkal1 ENSDARG00000104848 2102 1.735 - 0.768 - - - - - - 0.967 CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
38. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.733 - - - - 0.929 - - - 0.804 peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
39. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 1.73 - 0.765 - - 0.965 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
40. erh ENSDARG00000032866 20633 1.729 0.805 - - - - - 0.924 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
41. ppm1e ENSDARG00000026499 770 1.726 - 0.764 - - - - - - 0.962 protein phosphatase, Mg2+/Mn2+ dependent, 1E [Source:ZFIN;Acc:ZDB-GENE-070326-2]
42. nup188 ENSDARG00000030022 2398 1.723 - 0.745 - - - - - - 0.978 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
43. crtap ENSDARG00000018010 7722 1.722 - 0.881 - - - - 0.841 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
44. EEF1E1 ENSDARG00000071774 3806 1.717 - 0.741 - - - - - - 0.976 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
45. gpc1b ENSDARG00000090585 1393 1.716 - 0.752 - - - - - - 0.964 glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
46. commd4 ENSDARG00000061946 3281 1.712 - 0.753 - - - - - - 0.959 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
47. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.71 - 0.746 - - 0.964 - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
48. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.708 - - - - 0.775 - 0.933 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
49. nrf1 ENSDARG00000000018 4683 1.704 - 0.742 - - 0.962 - - - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
50. C18H12orf23 C18H12orf23 5362 1.701 - 0.746 - - - - - - 0.955
51. gbp ENSDARG00000040059 1939 1.695 - 0.731 - - 0.964 - - - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
52. kpna3 ENSDARG00000052641 5347 1.693 - 0.775 - - - - - - 0.918 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
53. atpif1a 6030 1.685 0.737 - - - 0.948 - - - - ATPase inhibitory factor 1a
54. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.685 - 0.778 - - - - 0.907 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
55. arpc4l ENSDARG00000058225 10107 1.684 - - - - - - 0.850 - 0.834 actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
56. pes ENSDARG00000018902 3286 1.683 - 0.758 - - - - 0.925 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
57. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 1.679 - 0.716 - - 0.963 - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
58. mrpl27 ENSDARG00000032985 2158 1.671 - 0.745 - - - - 0.926 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
59. asphd2 ENSDARG00000059629 1005 1.67 - 0.704 - - - - - - 0.966 aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
60. ap1s1 ENSDARG00000056803 3854 1.668 - 0.748 - - - - 0.920 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
61. bag1 ENSDARG00000020895 1660 1.668 0.704 - - - 0.964 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
62. chchd1 ENSDARG00000029100 2121 1.667 0.757 - - - - - 0.910 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
63. ppig ENSDARG00000044431 3427 1.666 - - 0.706 - - - - - 0.960 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
64. ppp3r1a ENSDARG00000092659 9729 1.664 - - 0.733 - - - 0.931 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
65. zgc:55512 zgc:55512 4436 1.664 - 0.705 - - 0.959 - - - -
66. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.663 - 0.718 - - - - - - 0.945 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
67. calm2b 3890 1.662 0.747 - - - - - 0.915 - - calmodulin 2b, (phosphorylase kinase, delta)
68. uhrf1 ENSDARG00000103409 3282 1.661 - - - - - - 0.916 0.745 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
69. DNAJA4 ENSDARG00000051762 5657 1.66 - 0.708 - - 0.952 - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
70. plekhh1 ENSDARG00000053835 2123 1.659 - 0.759 - - - - 0.900 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
71. ndufab1b ENSDARG00000014915 12796 1.659 - 0.758 - - - - - - 0.901 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
72. ppm1g ENSDARG00000075559 6516 1.659 - 0.721 - - - - 0.938 - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
73. etfa ENSDARG00000101631 2946 1.652 0.714 - - - - - 0.938 - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
74. btf3l4_1 ENSDARG00000089681 1089 1.651 - 0.739 - - - - 0.912 - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
75. cnih cnih 8292 1.651 - - - - - - 0.879 - 0.772
76. ndufa6 ENSDARG00000038028 2653 1.646 - 0.756 - - - - 0.890 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
77. fzr1 fzr1 2984 1.645 - 0.738 - - - - 0.907 - -
78. COL13A1 1565 1.644 0.736 - - - - - 0.908 - - collagen, type XIII, alpha 1, transcript variant X1
79. lepre1 lepre1 5346 1.638 - 0.721 - - - - - - 0.917
80. srsf2a ENSDARG00000057484 25721 1.637 - - - 0.705 - - 0.932 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
81. ppp1r3b ENSDARG00000044691, ENSDARG00000110639, ENSDARG00000114900 2990 1.637 - 0.813 - - - - 0.824 - - protein phosphatase 1, regulatory subunit 3B [Source:ZFIN;Acc:ZDB-GENE-030131-5496]
82. drap1 ENSDARG00000041203 6749 1.636 - - - - - 0.724 0.912 - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
83. gapdhs ENSDARG00000039914 8760 1.631 - - - - 0.857 - - - 0.774 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
84. mrpl12 ENSDARG00000038768 5539 1.63 - 0.722 - - - - 0.908 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
85. EML4_1 EML4_1 8736 1.628 - - - - - 0.782 0.846 - -
86. auts2 auts2 1538 1.626 - 0.723 - - - - 0.903 - -
87. mrps30 ENSDARG00000104111 2900 1.626 - - - - - 0.719 0.907 - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
88. prtfdc1 ENSDARG00000011683 1534 1.624 - 0.747 - - - - 0.877 - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
89. RAMP1 RAMP1 736 1.617 - 0.729 - - - - 0.888 - -
90. wnk1b ENSDARG00000039392 3587 1.615 0.775 0.840 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
91. ppiab ENSDARG00000103994 47491 1.609 - - - - 0.718 - 0.891 - - peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
92. sp3b ENSDARG00000007812 2928 1.608 - 0.704 - - - - 0.904 - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
93. mcl1a ENSDARG00000009779 2058 1.607 - - - - - 0.702 0.905 - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
94. atf4b1 atf4b1 17316 1.595 - - - - - 0.838 - - 0.757
95. uqcc uqcc 4742 1.591 - - - - - 0.816 0.775 - -
96. gtpbp4 ENSDARG00000018961 5323 1.574 - - - - 0.851 0.723 - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
97. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.568 - - - - 0.760 - 0.808 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
98. tgif1 ENSDARG00000059337 4020 1.567 - 0.727 - - 0.840 - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
99. ddost ENSDARG00000037318 10904 1.566 - - - - - 0.782 - - 0.784 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
100. snrpe ENSDARG00000033175 7462 1.565 - 0.711 - - - - - - 0.854 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]

There are 1326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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