Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-229o8.4

Gene Name Gene ID Reads Annotation
si:ch211-229o8.4 si:ch211-229o8.4 1










Genes with expression patterns similar to si:ch211-229o8.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-229o8.4 si:ch211-229o8.4 1 2 - - - - 1.000 1.000 - - -
2. CMA1_9 CMA1_9 1 1.96 - - - - 0.960 1.000 - - -
3. ENSDARG00000086059 ENSDARG00000086059 9 1.921 - - - - 0.921 1.000 - - -
4. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.914 - - - - 0.914 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
5. si:dkey-63d15.12 ENSDARG00000075480 9 1.748 - - - - 0.748 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
6. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
7. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
8. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
9. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
10. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
11. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
12. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
13. TMEM136 TMEM136 13 1 - - - - - 1.000 - - -
14. nr4a2a ENSDARG00000017007 140 1 - - - - - 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
15. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
16. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
17. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
18. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
19. BX927122.3 BX927122.3 19 1 - - - - - 1.000 - - -
20. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
21. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
22. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
23. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
24. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
25. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
26. CR356223.4 CR356223.4 42 1 - - - - - 1.000 - - -
27. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - 1.000 - - -
28. asip asip 2 1 - - - - - 1.000 - - -
29. polg ENSDARG00000060951 33 1 - - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
30. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
31. si:ch1073-219n12.1 71 1 - - - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
32. si:ch211-71k24.5 si:ch211-71k24.5 9 1 - - - - - 1.000 - - -
33. htr1aa ENSDARG00000093745 0 1 - - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-071203-1]
34. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
35. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
36. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
37. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
38. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - - 1.000 - - -
39. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
40. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
41. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
42. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
43. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
44. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
45. CU638740.4 CU638740.4 1 1 - - - - - 1.000 - - -
46. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
47. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
48. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
49. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
50. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
51. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
52. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
53. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
54. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
55. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
56. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
57. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
58. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
59. si:ch211-108c6.2 14 1 - - - - - 1.000 - - - si:ch211-108c6.2
60. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
61. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
62. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
63. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
64. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -
65. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
66. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
67. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
68. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
69. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - - - - - 1.000 - - -
70. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -
71. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
72. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
73. FAM78A FAM78A 61 1 - - - - - 1.000 - - -
74. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
75. nid2b ENSDARG00000009471 4 1 - - - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
76. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
77. gpr88 24 1 - - - - - 1.000 - - - G protein-coupled receptor 88
78. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - 1.000 - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
79. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
80. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
81. aqp1a.2 ENSDARG00000091027 6 1 - - - - - 1.000 - - - aquaporin 1a (Colton blood group), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-100409-1]
82. il21r il21r 74 1 - - - - - 1.000 - - -
83. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
84. ADAMTS15 ADAMTS15 73 1 - - - - - 1.000 - - -
85. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
86. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
87. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 1 - - - - - 1.000 - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
88. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
89. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
90. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
91. cngb3 cngb3 12 1 - - - - - 1.000 - - -
92. si:ch211-258f1.3 ENSDARG00000105119 23 1 - - - - - 1.000 - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
93. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
94. CR339051.1 CR339051.1 9 1 - - - - - 1.000 - - -
95. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
96. rnaset2l ENSDARG00000058413 17 1 - - - - - 1.000 - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
97. leprel4 leprel4 34 1 - - - - - 1.000 - - -
98. CABZ01083834.1 CABZ01083834.1 38 1 - - - - - 1.000 - - -
99. wdr65 wdr65 251 1 - - - - - 1.000 - - -
100. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]

There are 388 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA