Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-229b6.1

Gene Name Gene ID Reads Annotation
si:ch211-229b6.1 ENSDARG00000093422 151 si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]










Genes with expression patterns similar to si:ch211-229b6.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-229b6.1 ENSDARG00000093422 151 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
2. aldh3a2a ENSDARG00000028259 591 2.552 - - - - - - 0.865 0.884 0.803 aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
3. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 2.495 0.901 - - - - - 0.777 0.817 - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
4. enosf1 ENSDARG00000038359 209 2.313 - 0.703 - - - - 0.761 - 0.849 enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
5. RFESD_1 RFESD_1 65 1.929 0.995 - - - - - - 0.934 -
6. ap2m1b ENSDARG00000033899 317 1.903 0.992 - - - - - 0.911 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
7. mnd1 ENSDARG00000074451 182 1.89 0.998 - - - - - - 0.892 - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
8. saga ENSDARG00000012610 63 1.85 - - - - - - 0.931 0.919 - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
9. STARD4 ENSDARG00000102477 411 1.812 - - - - - - 0.897 0.915 - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
10. gab1 ENSDARG00000037018 1489 1.808 0.925 - - - - - - 0.883 - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
11. slc35f2 ENSDARG00000069745, ENSDARG00000110521 260 1.786 - - - - - - 0.913 0.873 - solute carrier family 35, member F2 [Source:ZFIN;Acc:ZDB-GENE-030131-5516]
12. tmem160 ENSDARG00000069649 587 1.783 0.944 - - - - - 0.839 - - transmembrane protein 160 [Source:ZFIN;Acc:ZDB-GENE-060503-851]
13. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 1.777 0.988 - - - - - - - 0.789 adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
14. otud3 ENSDARG00000022648 263 1.769 - - - - - - 0.918 0.851 - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
15. pdcd2 ENSDARG00000007892 223 1.761 - 0.843 - - - - - 0.918 - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
16. zgc:165481 ENSDARG00000060092 95 1.756 - - - - - - - 0.893 0.863 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
17. THEG ENSDARG00000078644 121 1.747 0.980 - - - - - - - 0.767 theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
18. pipox ENSDARG00000055591 260 1.747 0.946 - - - - - - - 0.801 pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
19. TMEM55B TMEM55B 76 1.742 0.996 - - - - 0.746 - - -
20. stx11a ENSDARG00000044039 39 1.741 - - - - - - 0.882 - 0.859 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
21. FRRS1 FRRS1 80 1.735 - 0.809 - - - - - 0.926 -
22. snap25b ENSDARG00000058117 469 1.725 - 0.857 - - - - - 0.868 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
23. mpzl3 959 1.724 0.896 - - - - - - - 0.828 myelin protein zero-like 3
24. kremen1 ENSDARG00000062579 190 1.719 0.934 - - - - - - - 0.785 kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
25. polh ENSDARG00000070231, ENSDARG00000111719 154 1.713 - 0.790 - - - - - 0.923 - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
26. wfdc1 ENSDARG00000058003 850 1.712 0.982 0.730 - - - - - - - WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
27. zgc:101664 ENSDARG00000035700 530 1.71 0.914 - - - - - 0.796 - - zgc:101664 [Source:ZFIN;Acc:ZDB-GENE-041010-187]
28. hsd17b7 ENSDARG00000088140 185 1.704 - - - - - - 0.923 - 0.781 hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
29. csde1 ENSDARG00000074758 172 1.698 - - - - - 0.784 - 0.914 - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
30. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.697 0.887 - - - - - - 0.810 - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
31. atg16l1 ENSDARG00000099430 924 1.685 0.896 - - - - - 0.789 - - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
32. gnptg ENSDARG00000038566 259 1.684 - - - - - - 0.928 - 0.756 N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
33. si:ch211-76l23.5 si:ch211-76l23.5 26 1.681 - 0.816 - - - - - - 0.865
34. MTHFS ENSDARG00000104487 770 1.68 - - - - - - 0.899 0.781 - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
35. ft1 ENSDARG00000059056 102 1.679 - - - - - - 0.778 0.901 - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
36. fut9 fut9 519 1.676 0.870 - - - - - 0.806 - -
37. retsat ENSDARG00000018600 832 1.672 0.900 - - - - - 0.772 - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
38. htra1a ENSDARG00000032831, ENSDARG00000111829 1008 1.671 - 0.877 - - - - 0.794 - - HtrA serine peptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-64]
39. gng8 ENSDARG00000042970 117 1.663 - - - - - 0.746 - 0.917 - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
40. ppp2r5a ENSDARG00000027017 2397 1.661 0.889 - - - - - - 0.772 - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
41. styk1 1199 1.652 - - - - - - - 0.882 0.770 serine/threonine/tyrosine kinase 1
42. otof otof 127 1.644 - 0.815 - - - - 0.829 - -
43. zgc:110269 ENSDARG00000012325 691 1.643 - - - - - - - 0.853 0.790 zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
44. TNC ENSDARG00000021948, ENSDARG00000113518 223 1.642 0.860 0.782 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
45. si:dkey-228a15.1 ENSDARG00000095698 267 1.631 - 0.745 - - - 0.886 - - - si:dkey-228a15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-344]
46. rtn4rl1a ENSDARG00000007856 242 1.63 - - - - 0.757 - 0.873 - - reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
47. tmbim1 tmbim1 1005 1.628 0.906 - - - - - 0.722 - -
48. rnasen ENSDARG00000055563 609 1.625 - - - - - - - 0.764 0.861 ribonuclease type III, nuclear [Source:ZFIN;Acc:ZDB-GENE-070209-23]
49. fam188a 275 1.615 - 0.755 - - - - - 0.860 - family with sequence similarity 188, member A
50. slc7a10a ENSDARG00000008100 178 1.614 - - - - - - 0.811 - 0.803 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
51. BX296557.2 BX296557.2 1083 1.611 0.903 - - - - - - 0.708 -
52. agtr1b ENSDARG00000045443 232 1.608 - 0.808 - - - - - - 0.800 angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
53. cbx3b ENSDARG00000092158 1976 1.605 - 0.740 - - - - - 0.865 - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
54. emc7 ENSDARG00000012144 1608 1.597 0.786 - - - - - - 0.811 - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
55. zgc:153896 ENSDARG00000003977 142 1.587 - 0.739 - - - - 0.848 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
56. wipi2 ENSDARG00000037871 425 1.584 - - - - - - 0.702 0.882 - WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
57. plekhf2 ENSDARG00000021141 529 1.583 0.874 - - - - - - 0.709 - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
58. spg20b 224 1.577 - - - - - - 0.870 - 0.707 spastic paraplegia 20b (Troyer syndrome)
59. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.577 0.795 - - - - - - 0.782 - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
60. slc2a10 ENSDARG00000090820 637 1.568 0.821 - - - - - 0.747 - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
61. ssx2ip ssx2ip 482 1.565 - - - - - - 0.732 - 0.833
62. srsf9 ENSDARG00000008097 2405 1.561 0.858 - - - - - 0.703 - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
63. VASH1 ENSDARG00000092716 33 1.555 - 0.809 - - - 0.746 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
64. snx14 ENSDARG00000006332 435 1.553 - - - - - - 0.768 - 0.785 sorting nexin 14 [Source:ZFIN;Acc:ZDB-GENE-040724-144]
65. clpxa ENSDARG00000029063 1188 1.551 0.800 - - - - - - 0.751 - caseinolytic mitochondrial matrix peptidase chaperone subunit a [Source:ZFIN;Acc:ZDB-GENE-040912-143]
66. b4galnt3b ENSDARG00000058939 413 1.546 - - - - - - - 0.800 0.746 beta-1,4-N-acetyl-galactosaminyl transferase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8615]
67. usp54a ENSDARG00000077948, ENSDARG00000112037 406 1.534 - - - - - - 0.782 - 0.752 ubiquitin specific peptidase 54a [Source:ZFIN;Acc:ZDB-GENE-090828-2]
68. si:ch211-232i5.3 ENSDARG00000086874 1256 1.525 0.799 - - - - - - - 0.726 si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
69. xpnpep1 ENSDARG00000029011 1723 1.522 0.803 - - - - - 0.719 - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
70. camkmt ENSDARG00000095224 1204 1.522 - - - - - - 0.776 - 0.746 calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
71. si:dkeyp-19e1.3 ENSDARG00000051836 531 1.511 - - - - - - 0.721 - 0.790 si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
72. nek6 ENSDARG00000037963 316 1.508 - - - - - - 0.747 - 0.761 NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
73. kdm2bb ENSDARG00000046010 747 1.501 - 0.755 - - - - 0.746 - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
74. rock1 ENSDARG00000058993 2603 1.5 0.765 - - - - - - 0.735 - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
75. zgc:163030 ENSDARG00000069192 2963 1.487 0.719 - - - - - - 0.768 - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
76. faxdc2 ENSDARG00000023820 260 1.479 - - - - - - 0.747 - 0.732 fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
77. xrcc1 ENSDARG00000009494 1346 1.468 - 0.746 - - - - 0.722 - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
78. fam102bb ENSDARG00000002333 1483 1.447 - 0.703 - - - - - 0.744 - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
79. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.437 - - - - - - - 0.706 0.731 si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
80. HS1BP3 ENSDARG00000034222 304 1.43 - 0.714 - - - - 0.716 - - HCLS1 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-391]
81. si:ch211-10a23.2 ENSDARG00000060656 471 1.425 - 0.722 - - - - - 0.703 - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
82. cryzl1 ENSDARG00000026902 401 1.419 - - - - - - - 0.707 0.712 crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
83. brf1a ENSDARG00000017835 206 0.999 0.999 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
84. CABZ01020207.1 CABZ01020207.1 145 0.998 0.998 - - - - - - - -
85. C17H14orf1 C17H14orf1 256 0.998 0.998 - - - - - - - -
86. zgc:101562 ENSDARG00000040179 90 0.998 0.998 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]
87. TMEM220 ENSDARG00000088981 28 0.998 0.998 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
88. plekhg7 ENSDARG00000062855 308 0.998 0.998 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
89. si:ch211-191a16.5 ENSDARG00000096545 45 0.998 0.998 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
90. si:dkey-58f10.12 ENSDARG00000092680 258 0.998 0.998 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
91. si:dkey-7i1.4 si:dkey-7i1.4 77 0.998 0.998 - - - - - - - -
92. gpr78 gpr78 135 0.997 0.997 - - - - - - - -
93. si:dkey-164n2.1 47 0.997 0.997 - - - - - - - - si:dkey-164n2.1, transcript variant X1
94. exd3 ENSDARG00000063140 119 0.997 0.997 - - - - - - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
95. baiap2l1a ENSDARG00000029305 30 0.997 0.997 - - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
96. dgat1a ENSDARG00000103503 63 0.997 0.997 - - - - - - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
97. CU468896.2 CU468896.2 38 0.997 0.997 - - - - - - - -
98. rnf152 ENSDARG00000087782 141 0.997 0.997 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
99. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.997 0.997 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
100. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 0.997 0.997 - - - - - - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]

There are 1773 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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