Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-227e10.1

Gene Name Gene ID Reads Annotation
si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]










Genes with expression patterns similar to si:ch211-227e10.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. GPR97 GPR97 9 1 - 1.000 - - - - - - -
2. tmprss13a ENSDARG00000100969 84 1 - 1.000 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
3. zgc:92326 zgc:92326 94 1 - 1.000 - - - - - - -
4. tirap ENSDARG00000074371 10 1 - 1.000 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
5. elavl2 ENSDARG00000040732 44 1 - 1.000 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
6. CU929163.1 CU929163.1 11 1 - 1.000 - - - - - - -
7. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - 1.000 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
8. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 1 - 1.000 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
9. klhdc8b ENSDARG00000090787 33 1 - 1.000 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
10. CABZ01081656.1 CABZ01081656.1 14 1 - 1.000 - - - - - - -
11. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - 1.000 - - - - - - -
12. si:ch211-284e13.4 ENSDARG00000060330 6 1 - 1.000 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
13. si:dkey-192i18.3 si:dkey-192i18.3 47 1 - 1.000 - - - - - - -
14. grip2b ENSDARG00000027618 9 1 - 1.000 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
15. BX004816.4 BX004816.4 33 1 - 1.000 - - - - - - -
16. dio2 ENSDARG00000094857 17 1 - 1.000 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
17. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
18. dpt ENSDARG00000056178 7 1 - 1.000 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
19. slc43a3b ENSDARG00000057949 194 1 - 1.000 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
20. GFRAL ENSDARG00000089709 167 1 - 1.000 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
21. SNORA53 SNORA53 10 1 - 1.000 - - - - - - -
22. sdk1a ENSDARG00000078866 159 0.999 - 0.999 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
23. TC2N ENSDARG00000095067 146 0.999 - 0.999 - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
24. gng8 ENSDARG00000042970 117 0.999 - 0.999 - - - - - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
25. wdyhv1 ENSDARG00000070403 42 0.998 - 0.998 - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
26. si:ch211-236p5.2 ENSDARG00000086256 8 0.998 - 0.998 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
27. si:ch211-255g12.8 ENSDARG00000069627 22 0.998 - 0.998 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
28. CR354432.1 CR354432.1 424 0.997 - 0.997 - - - - - - -
29. si:ch1073-228j22.1 ENSDARG00000095799 98 0.996 - 0.996 - - - - - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
30. stk38l ENSDARG00000045482 266 0.996 - 0.996 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
31. C17H2orf43 C17H2orf43 379 0.996 - 0.996 - - - - - - -
32. ccl25b ENSDARG00000070873 454 0.995 - 0.995 - - - - - - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
33. btbd9 ENSDARG00000068983 356 0.993 - 0.993 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
34. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.993 - 0.993 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
35. CU855953.1 CU855953.1 137 0.992 - 0.992 - - - - - - -
36. cdx1a ENSDARG00000114554 28 0.991 - 0.991 - - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
37. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.99 - 0.990 - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
38. zgc:171779 ENSDARG00000016908 26 0.99 - 0.990 - - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
39. zgc:152938 ENSDARG00000102586 97 0.988 - 0.988 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
40. slc6a13l 121 0.986 - 0.986 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
41. itsn1 ENSDARG00000000086 684 0.986 - 0.986 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
42. plekha7a ENSDARG00000060813 179 0.985 - 0.985 - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
43. entpd2a.2 ENSDARG00000033953 389 0.985 - 0.985 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
44. SLC22A15 ENSDARG00000055445 111 0.983 - 0.983 - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
45. fam83b ENSDARG00000078309 318 0.982 - 0.982 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
46. cry1b cry1b 152 0.981 - 0.981 - - - - - - -
47. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.981 - 0.981 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
48. mettl6 ENSDARG00000070085 366 0.981 - 0.981 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
49. si:ch211-279m15.1 si:ch211-279m15.1 67 0.98 - 0.980 - - - - - - -
50. ddrgk1_1 ENSDARG00000037172 1563 0.98 - 0.980 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
51. abcb8 ENSDARG00000056672 589 0.979 - 0.979 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
52. sfmbt2 ENSDARG00000045519 251 0.979 - 0.979 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
53. TNFRSF11B ENSDARG00000098377 98 0.978 - 0.978 - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
54. gpr173 ENSDARG00000042922 238 0.978 - 0.978 - - - - - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
55. caprin2 ENSDARG00000020749 39 0.977 - 0.977 - - - - - - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
56. acaa1 ENSDARG00000004687 557 0.977 - 0.977 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
57. dre-mir-222a ENSDARG00000090347 131 0.976 - 0.976 - - - - - - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
58. ptpn3 ENSDARG00000055784 436 0.976 - 0.976 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
59. BX465203.2 BX465203.2 23 0.976 - 0.976 - - - - - - -
60. nkx2.2b ENSDARG00000101549 266 0.972 - 0.972 - - - - - - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
61. pcdh1b ENSDARG00000036175 101 0.972 - 0.972 - - - - - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
62. vhl ENSDARG00000070617 663 0.971 - 0.971 - - - - - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
63. b3gnt3.4 ENSDARG00000058100 117 0.97 - 0.970 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
64. si:dkey-162h11.3 41 0.966 - 0.966 - - - - - - - si:dkey-162h11.3, transcript variant X2
65. rfng ENSDARG00000019746 627 0.966 - 0.966 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5418]
66. tctex1d2 ENSDARG00000054255 320 0.966 - 0.966 - - - - - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
67. CR925758.1 CR925758.1 83 0.964 - 0.964 - - - - - - -
68. CYP27B1 ENSDARG00000045015 119 0.964 - 0.964 - - - - - - - cytochrome P450, family 27, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-111005-2]
69. CABZ01071909.1_1 ENSDARG00000117524 86 0.963 - 0.963 - - - - - - -
70. si:dkey-52k20.13 si:dkey-52k20.13 428 0.961 - 0.961 - - - - - - -
71. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.961 - 0.961 - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
72. arhgef18b ENSDARG00000042308 298 0.96 - 0.960 - - - - - - - rho/rac guanine nucleotide exchange factor (GEF) 18b [Source:ZFIN;Acc:ZDB-GENE-070705-462]
73. ttpal ENSDARG00000070644, ENSDARG00000112925 471 0.959 - 0.959 - - - - - - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
74. wipf2b ENSDARG00000006712 375 0.958 - 0.958 - - - - - - - WAS/WASL interacting protein family, member 2b [Source:ZFIN;Acc:ZDB-GENE-040625-182]
75. MSI1 ENSDARG00000010710 478 0.957 - 0.957 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
76. si:dkey-222o15.5 si:dkey-222o15.5 27 0.956 - 0.956 - - - - - - -
77. gsg1l ENSDARG00000037390 181 0.955 - 0.955 - - - - - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
78. pcp4b 1080 0.954 - 0.954 - - - - - - - Purkinje cell protein 4b
79. si:ch211-214e3.5 ENSDARG00000074270 755 0.953 - 0.953 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
80. THEM6_1 ENSDARG00000103914 469 0.952 - 0.952 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
81. il13ra1 ENSDARG00000080020 443 0.951 - 0.951 - - - - - - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
82. grik1a ENSDARG00000069139 130 0.95 - 0.950 - - - - - - - glutamate receptor, ionotropic, kainate 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6502]
83. C25H12orf4 C25H12orf4 317 0.95 - 0.950 - - - - - - -
84. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 0.95 - 0.950 - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
85. si:dkey-10g2.5 si:dkey-10g2.5 72 0.949 - 0.949 - - - - - - -
86. rxrab ENSDARG00000035127 231 0.948 - 0.948 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
87. rdh8a ENSDARG00000028048 334 0.947 - 0.947 - - - - - - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
88. vsig8b ENSDARG00000013685 246 0.947 - 0.947 - - - - - - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
89. kat6a ENSDARG00000018907 250 0.946 - 0.946 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
90. INPP5K INPP5K 137 0.946 - 0.946 - - - - - - -
91. FP236789.2 FP236789.2 335 0.944 - 0.944 - - - - - - -
92. col12a1a ENSDARG00000078322 1833 0.942 - 0.942 - - - - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
93. irf2a ENSDARG00000007387 915 0.941 - 0.941 - - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
94. tmem168a ENSDARG00000068705 498 0.94 - 0.940 - - - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
95. bmp7a ENSDARG00000018260 92 0.939 - 0.939 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
96. COBLL1 COBLL1 14 0.939 - 0.939 - - - - - - -
97. mettl3 ENSDARG00000012827 728 0.938 - 0.938 - - - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
98. si:ch211-13o20.3 si:ch211-13o20.3 113 0.937 - 0.937 - - - - - - -
99. katnbl1 ENSDARG00000042522 1086 0.937 - 0.937 - - - - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
100. CR318593.1 CR318593.1 290 0.934 - 0.934 - - - - - - -

There are 342 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA