Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-226o13.2

Gene Name Gene ID Reads Annotation
si:ch211-226o13.2 84923 si:ch211-226o13.2










Genes with expression patterns similar to si:ch211-226o13.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-226o13.2 84923 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-226o13.2
2. ckmb ENSDARG00000040565 505935 6.978 0.823 - 0.930 0.900 0.925 0.834 0.834 0.952 0.780 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
3. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 6.731 0.777 - 0.858 0.701 0.900 0.903 0.826 0.884 0.882 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
4. ckma ENSDARG00000035327, ENSDARG00000114671 418792 6.358 0.894 - 0.917 0.879 0.946 0.872 - 0.929 0.921 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
5. mylz3 ENSDARG00000017441 303597 6.295 0.840 - 0.936 0.895 0.940 0.884 - 0.898 0.902 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
6. tnnt3a ENSDARG00000030270 112506 6.264 0.875 - 0.939 0.878 0.836 0.892 - 0.880 0.964 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
7. atp2a1 ENSDARG00000020574 291561 6.164 0.791 - 0.961 0.926 0.914 0.788 - 0.867 0.917 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
8. tpma ENSDARG00000033683 752432 6.118 0.867 - 0.942 0.889 0.894 0.880 - 0.856 0.790 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
9. tnni2a.4 ENSDARG00000029069 122344 5.802 0.747 - 0.873 0.801 0.897 0.722 - 0.929 0.833 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
10. myhz1.3 ENSDARG00000067997 155509 5.791 0.848 - 0.910 0.835 0.889 0.829 - 0.771 0.709 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
11. SYNPO2L SYNPO2L 6697 5.695 0.720 - 0.861 0.865 0.821 0.783 - 0.718 0.927
12. acta1b ENSDARG00000055618 195597 5.635 0.753 - 0.954 0.709 0.702 0.931 - 0.858 0.728 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
13. casq2 ENSDARG00000008982 21802 5.517 0.763 - 0.882 0.830 0.876 0.704 - 0.741 0.721 calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
14. tnnt3b ENSDARG00000068457 101827 5.447 0.924 - 0.908 0.951 0.858 0.870 - 0.936 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
15. mylpfb ENSDARG00000002589 70167 5.301 0.821 - 0.942 0.959 0.847 0.829 - 0.903 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
16. ttnb ttnb 73721 5.148 - - 0.912 0.949 0.822 0.822 - 0.837 0.806
17. myoz1b ENSDARG00000071445 13381 5.121 0.730 - 0.869 0.916 0.752 - - 0.885 0.969 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
18. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 5.081 0.736 - 0.812 0.947 - 0.727 - 0.891 0.968 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
19. mybpc2b ENSDARG00000021265 9618 5.051 0.736 - 0.890 0.909 0.803 - - 0.820 0.893 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
20. myl1 ENSDARG00000014196 98943 5.043 0.754 - 0.935 0.759 0.882 0.823 - 0.890 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
21. neb ENSDARG00000032630, ENSDARG00000109273 19493 4.975 - - 0.904 0.929 0.711 0.794 - 0.728 0.909 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
22. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 4.914 - - 0.734 0.909 0.833 0.752 - 0.775 0.911 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
23. hhatla ENSDARG00000039051 6598 4.91 0.725 - 0.867 0.864 0.753 - - 0.747 0.954 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
24. pkmb ENSDARG00000099860 25094 4.82 - - 0.793 0.877 0.833 0.738 - 0.828 0.751 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
25. rtn2a ENSDARG00000016088 12184 4.769 0.726 0.790 0.839 0.846 0.786 - - 0.782 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
26. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 4.685 - - 0.859 0.817 0.744 0.754 - 0.729 0.782 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
27. ank1 ank1 5209 4.666 0.705 - 0.841 0.713 0.752 - - 0.742 0.913
28. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 4.558 0.883 - 0.925 - 0.891 0.917 - 0.942 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
29. murca murca 6614 4.515 0.737 - 0.850 0.709 0.721 0.729 - - 0.769
30. ttna ttna 101197 4.389 0.867 - 0.917 - 0.829 - - 0.867 0.909
31. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.379 0.881 - 0.894 - 0.776 - - 0.882 0.946 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
32. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 4.3 0.879 - 0.867 0.886 0.851 - - - 0.817 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
33. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 4.273 0.950 - - 0.750 - 0.933 0.717 0.923 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
34. CR847973.1 ENSDARG00000115516 8754 4.24 - - 0.854 0.913 0.722 - - 0.852 0.899
35. jph2 ENSDARG00000028625 6706 4.215 - 0.748 - 0.812 0.830 - - 0.887 0.938 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
36. pvalb1 ENSDARG00000037789 121195 4.199 0.885 - 0.745 - 0.759 0.917 - 0.893 - parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
37. BX294434.1 ENSDARG00000061272 6493 4.173 0.733 - 0.863 0.842 - - - 0.805 0.930 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
38. tnnt2d ENSDARG00000002988 7590 4.152 - - 0.799 0.856 0.814 - - 0.785 0.898 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
39. si:ch211-255p10.3 ENSDARG00000096616 8336 4.096 - - 0.783 0.809 - 0.779 - 0.812 0.913 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
40. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 4.094 0.724 - 0.899 0.887 0.713 - - 0.871 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
41. ryr3 ENSDARG00000071331 6795 4.036 - - 0.843 0.809 - 0.752 - 0.725 0.907 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
42. klhl31 ENSDARG00000039066 13656 4.034 0.736 - 0.856 - 0.703 - - 0.848 0.891 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
43. MYOM2_1 MYOM2_1 4054 4.023 - - 0.794 0.842 0.712 - - 0.788 0.887
44. tgm2a ENSDARG00000070157 4516 4.014 0.736 - 0.860 - 0.803 0.753 - - 0.862 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
45. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.936 - - 0.732 0.820 - 0.741 - 0.753 0.890 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
46. SYNPO2 SYNPO2 7382 3.933 - - 0.901 0.717 - 0.756 - 0.715 0.844
47. tmem38a ENSDARG00000024047 41883 3.893 0.707 - 0.889 0.737 0.723 - - 0.837 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
48. znf648 ENSDARG00000104823 1918 3.89 - - 0.730 0.764 - 0.727 - 0.785 0.884 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
49. EHBP1L1 EHBP1L1 2500 3.877 0.711 - 0.847 0.834 0.757 - - 0.728 -
50. pgam2 ENSDARG00000057571 23387 3.875 0.705 - 0.759 0.876 0.769 - - 0.766 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
51. casq1b ENSDARG00000018105 2643 3.852 - - 0.731 0.774 0.771 - - 0.706 0.870 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
52. PTPLA PTPLA 4044 3.849 - - 0.700 0.713 - 0.795 - 0.758 0.883
53. eef2l2 ENSDARG00000035256 6815 3.846 0.708 - 0.837 0.851 0.726 - - 0.724 - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
54. ptrfa ptrfa 4363 3.846 - - 0.730 0.792 0.772 0.718 - - 0.834
55. si:ch211-156j16.1 ENSDARG00000092035 7441 3.838 0.745 - 0.805 0.750 - - - 0.738 0.800 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
56. sgcd ENSDARG00000098573 4980 3.756 - - 0.780 0.757 0.760 - - 0.702 0.757 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
57. txlnbb ENSDARG00000076241 6396 3.664 0.714 - - - 0.714 0.726 - 0.718 0.792 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
58. actc1b ENSDARG00000099197 324665 3.513 0.920 - 0.905 - 0.877 - - 0.811 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
59. tmod4 ENSDARG00000020890 17436 3.48 - - 0.897 0.901 0.732 - - - 0.950 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
60. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.469 - - 0.930 0.891 0.906 - - 0.742 - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
61. myom1a ENSDARG00000061249 10230 3.456 - - 0.902 - - 0.792 - 0.866 0.896 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
62. CR354540.2 ENSDARG00000117517 18452 3.39 - - 0.878 0.841 - - - 0.796 0.875
63. ak1 ENSDARG00000001950 26964 3.307 0.774 - - 0.803 0.852 - - 0.878 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
64. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 3.303 - - 0.862 0.827 0.775 - - 0.839 - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
65. ryr1b ENSDARG00000023797 5693 3.292 - - 0.801 - 0.711 - - 0.848 0.932 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
66. eno3 ENSDARG00000039007 11355 3.289 - - 0.772 0.829 0.781 - - - 0.907 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
67. gapdh ENSDARG00000043457 68684 3.281 - - 0.857 0.893 0.752 - - 0.779 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
68. prx ENSDARG00000017246 6183 3.24 - - 0.862 0.847 - - - 0.727 0.804 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
69. pygma ENSDARG00000055518 15972 3.234 0.745 - - - 0.893 - - 0.765 0.831 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
70. pvalb4 ENSDARG00000024433 35736 3.233 0.706 - 0.837 0.856 0.834 - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
71. desma ENSDARG00000058656 30292 3.212 - - 0.897 0.744 0.797 - - 0.774 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
72. atp2a1l ENSDARG00000035458 6222 3.197 - - 0.742 0.808 - - - 0.788 0.859 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
73. jph1a ENSDARG00000058603 2852 3.193 - - 0.749 0.809 - - - 0.788 0.847 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
74. actn3b ENSDARG00000001431 15747 3.163 0.737 - 0.843 0.795 0.788 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
75. sar1ab ENSDARG00000033320 3984 3.156 - - 0.825 0.844 0.774 - - 0.713 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
76. nexn ENSDARG00000057317 10972 3.143 0.737 - 0.770 - - 0.801 - - 0.835 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
77. smyd2b ENSDARG00000005629 8181 3.143 0.711 - - - 0.786 0.800 - - 0.846 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
78. SPEG SPEG 4017 3.137 - - 0.806 0.808 0.729 - - - 0.794
79. ca2 ENSDARG00000014488 10141 3.119 - - 0.840 0.783 0.790 - - - 0.706 carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
80. aldoab ENSDARG00000034470 88942 3.119 0.744 - - 0.744 0.816 0.815 - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
81. cap2 ENSDARG00000104478 3266 3.114 0.724 - - 0.706 - - - 0.784 0.900 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
82. tmem182 tmem182 12589 3.108 - - 0.767 0.739 - 0.808 - 0.794 -
83. zgc:158296 ENSDARG00000070923 3935 3.093 - - 0.829 0.772 - 0.704 - - 0.788 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
84. tmem161a ENSDARG00000012790 16094 3.056 0.724 - 0.711 0.703 - - - - 0.918 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
85. BX324201.1 BX324201.1 3302 3.014 0.716 - 0.781 - - - - 0.732 0.785
86. zgc:92518 ENSDARG00000016343 3837 2.985 0.712 - 0.774 - - 0.769 - - 0.730 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
87. apobec2a ENSDARG00000018881 4790 2.983 0.701 - - 0.772 - - - 0.776 0.734 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
88. slc16a3 ENSDARG00000045051 818 2.953 - - 0.768 0.722 - 0.714 - - 0.749 solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
89. acta1a ENSDARG00000036371 137508 2.646 0.934 - - - - 0.859 - 0.853 - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
90. srl ENSDARG00000104587 11126 2.54 - - 0.877 0.824 - - - 0.839 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
91. vcl vcl 6667 2.536 - - 0.908 - 0.859 - - - 0.769
92. mybpc3 ENSDARG00000011615 7271 2.53 - - - 0.787 0.863 - - - 0.880 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
93. tnni2b.1 ENSDARG00000035958 51597 2.496 0.887 - 0.847 - - - - 0.762 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
94. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.485 - - - 0.710 - - - 0.850 0.925 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
95. ldb3b ENSDARG00000099974 33615 2.474 0.788 - 0.897 - - 0.789 - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
96. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.474 - - 0.879 0.811 0.784 - - - -
97. jph1b ENSDARG00000038826 7416 2.442 - - 0.824 0.816 - - - 0.802 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
98. mdh1b ENSDARG00000018008 3196 2.441 - - 0.813 0.751 - - - - 0.877 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
99. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.436 - - 0.822 0.751 - - - 0.863 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
100. NRAP ENSDARG00000009341 3565 2.433 - - 0.847 0.822 - 0.764 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]

There are 299 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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